RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C SFH5P47008 294 aa2.85□□□□□ -1.95
PGD1YGL025C YJR085CP47131 105 aaKnown RBP2.85□□□□□ -1.95
PGD1YGL025C SRB7P47822 140 aa2.85□□□□□ -1.95
PGD1YGL025C HAL1Q01766 294 aa2.85□□□□□ -1.95
PGD1YGL025C KAP120Q02932 1032 aa2.85□□□□□ -1.95
PGD1YGL025C DON1Q05610 365 aa2.85□□□□□ -1.95
PGD1YGL025C SNT309Q06091 175 aaPredicted RBP2.85□□□□□ -1.95
PGD1YGL025C SRV2P17555 526 aaKnown RBP2.84□□□□□ -1.95
PGD1YGL025C NIP1P32497 812 aaKnown RBP2.84□□□□□ -1.95
PGD1YGL025C NUP2P32499 720 aa2.84□□□□□ -1.95
PGD1YGL025C RRN10P38204 145 aa2.84□□□□□ -1.95
PGD1YGL025C GAB1P41733 394 aa2.84□□□□□ -1.95
PGD1YGL025C MDE1P47095 244 aa2.84□□□□□ -1.95
PGD1YGL025C BNI5P53890 448 aaKnown RBP2.84□□□□□ -1.95
PGD1YGL025C DIS3Q08162 1001 aaKnown RBP2.84□□□□□ -1.95
PGD1YGL025C RRG1Q12167 365 aaPredicted RBP2.84□□□□□ -1.95
PGD1YGL025C COX3P00420 269 aa2.83□□□□□ -1.96
PGD1YGL025C CLN1P20437 546 aa2.83□□□□□ -1.96
PGD1YGL025C URA7P28274 579 aaKnown RBP2.83□□□□□ -1.96
PGD1YGL025C BYE1P36106 594 aa2.83□□□□□ -1.96
PGD1YGL025C SBE22P38814 852 aa2.83□□□□□ -1.96
PGD1YGL025C AIM10P39965 576 aaKnown RBP2.83□□□□□ -1.96
PGD1YGL025C UTP18P40362 594 aaPredicted RBP2.83□□□□□ -1.96
PGD1YGL025C URH1Q04179 340 aa2.83□□□□□ -1.96
PGD1YGL025C CUE5Q08412 411 aaKnown RBP2.83□□□□□ -1.96
PGD1YGL025C PLP2Q12017 286 aa2.83□□□□□ -1.96
PGD1YGL025C BUG1Q12191 341 aa2.83□□□□□ -1.96
PGD1YGL025C ATG34Q12292 412 aa2.83□□□□□ -1.96
PGD1YGL025C TY1B-AO13527 1196 aaKnown RBP2.82□□□□□ -1.96
PGD1YGL025C IMA3P0CW40 589 aa2.82□□□□□ -1.96
PGD1YGL025C IMA4P0CW41 589 aa2.82□□□□□ -1.96
PGD1YGL025C HSP26P15992 214 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
PGD1YGL025C URA4P20051 364 aa2.82□□□□□ -1.96
PGD1YGL025C REC107P21651 314 aa2.82□□□□□ -1.96
PGD1YGL025C ADK2P26364 225 aa2.82□□□□□ -1.96
PGD1YGL025C SIM1P40472 476 aa2.82□□□□□ -1.96
PGD1YGL025C NUP116Q02630 1113 aa2.82□□□□□ -1.96
PGD1YGL025C ACL4Q03771 387 aa2.82□□□□□ -1.96
PGD1YGL025C YDR131CQ03899 556 aa2.82□□□□□ -1.96
PGD1YGL025C DCS1Q06151 350 aa2.82□□□□□ -1.96
PGD1YGL025C IMA2Q08295 589 aa2.82□□□□□ -1.96
PGD1YGL025C IZH2Q12442 317 aa2.82□□□□□ -1.96
PGD1YGL025C AFI1Q99222 893 aa2.82□□□□□ -1.96
PGD1YGL025C ADE4P04046 510 aaKnown RBP2.81□□□□□ -1.96
PGD1YGL025C FUR1P18562 216 aaKnown RBP2.81□□□□□ -1.96
PGD1YGL025C BRF1P29056 596 aa2.81□□□□□ -1.96
PGD1YGL025C PHA2P32452 334 aa2.81□□□□□ -1.96
PGD1YGL025C CHK1P38147 527 aa2.81□□□□□ -1.96
PGD1YGL025C MMS4P38257 691 aa2.81□□□□□ -1.96
PGD1YGL025C NOC2P39744 710 aaKnown RBP2.81□□□□□ -1.96
PGD1YGL025C OCA2P53949 197 aa2.81□□□□□ -1.96
PGD1YGL025C YMR130WQ04223 302 aa2.81□□□□□ -1.96
PGD1YGL025C MMR1Q06324 491 aa2.81□□□□□ -1.96
PGD1YGL025C RAX1Q08760 435 aa2.81□□□□□ -1.96
PGD1YGL025C TPT1Q12272 230 aaKnown RBP2.81□□□□□ -1.96
PGD1YGL025C SNU66Q12420 587 aaPredicted RBP2.81□□□□□ -1.96
PGD1YGL025C YCL068CP25593 260 aa2.8□□□□□ -1.96
PGD1YGL025C ERV1P27882 189 aa2.8□□□□□ -1.96
PGD1YGL025C MRP21P38175 177 aa2.8□□□□□ -1.96
PGD1YGL025C MIG3P39943 394 aa2.8□□□□□ -1.96
PGD1YGL025C YPS6P40583 537 aa2.8□□□□□ -1.96
PGD1YGL025C TOM22P49334 152 aa2.8□□□□□ -1.96
PGD1YGL025C RPT4P53549 437 aaKnown RBP2.8□□□□□ -1.96
PGD1YGL025C MTQ1P53944 314 aa2.8□□□□□ -1.96
PGD1YGL025C YDL012CQ12489 107 aa2.8□□□□□ -1.96
PGD1YGL025C ARO3P14843 370 aaKnown RBP2.79□□□□□ -1.96
PGD1YGL025C RRP1P35178 278 aaPredicted RBP2.79□□□□□ -1.96
PGD1YGL025C JNM1P36224 373 aa2.79□□□□□ -1.96
PGD1YGL025C YIL029CP40538 142 aa2.79□□□□□ -1.96
PGD1YGL025C VPS72Q03388 795 aa2.79□□□□□ -1.96
PGD1YGL025C CCE1Q03702 353 aa2.79□□□□□ -1.96
PGD1YGL025C RRP9Q06506 573 aaKnown RBP2.79□□□□□ -1.96
PGD1YGL025C FAB1P34756 2278 aa2.79□□□□□ -1.96
PGD1YGL025C NAM2P11325 894 aa2.78□□□□□ -1.96
PGD1YGL025C MSI1P13712 422 aa2.78□□□□□ -1.96
PGD1YGL025C SLM4P38247 162 aa2.78□□□□□ -1.96
PGD1YGL025C MRM2P53123 320 aa2.78□□□□□ -1.96
PGD1YGL025C ADA2Q02336 434 aa2.78□□□□□ -1.96
PGD1YGL025C PDX1P16451 410 aa2.77□□□□□ -1.97
PGD1YGL025C EXG1P23776 448 aaKnown RBP2.77□□□□□ -1.97
PGD1YGL025C RPC53P25441 422 aa2.77□□□□□ -1.97
PGD1YGL025C YBR056WP38081 501 aa2.77□□□□□ -1.97
PGD1YGL025C SER3P40054 469 aa2.77□□□□□ -1.97
PGD1YGL025C CAK1P43568 368 aaPredicted RBP2.77□□□□□ -1.97
PGD1YGL025C COS1P53822 381 aa2.77□□□□□ -1.97
PGD1YGL025C STD1Q02794 444 aa2.77□□□□□ -1.97
PGD1YGL025C HOT1Q03213 719 aa2.77□□□□□ -1.97
PGD1YGL025C RPN9Q04062 393 aaKnown RBP2.77□□□□□ -1.97
PGD1YGL025C ERB1Q04660 807 aaKnown RBP2.77□□□□□ -1.97
PGD1YGL025C MDM36Q06820 579 aa2.77□□□□□ -1.97
PGD1YGL025C YGK3Q12222 375 aaPredicted RBP2.77□□□□□ -1.97
PGD1YGL025C JID1Q12350 301 aa2.77□□□□□ -1.97
PGD1YGL025C HOM3P10869 527 aa2.76□□□□□ -1.97
PGD1YGL025C DPH5P32469 300 aaPredicted RBP2.76□□□□□ -1.97
PGD1YGL025C TFB1P32776 642 aa2.76□□□□□ -1.97
PGD1YGL025C YKL097CP34245 136 aa2.76□□□□□ -1.97
PGD1YGL025C HEL1P36113 551 aa2.76□□□□□ -1.97
PGD1YGL025C ASC1P38011 319 aaKnown RBP2.76□□□□□ -1.97
PGD1YGL025C RTC2P38279 296 aa2.76□□□□□ -1.97
PGD1YGL025C COX14P39103 70 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms