RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	RAD34	Q06665	692 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	RGT2	Q12300	763 aa		4.07	□□□□□ -1.76
PMC1	YGL006W	CDC21	P06785	304 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	DAP2	P18962	818 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	YDJ1	P25491	409 aa	Known RBP	4.06	□□□□□ -1.76
PMC1	YGL006W	CDC12	P32468	407 aa	Known RBP	4.06	□□□□□ -1.76
PMC1	YGL006W	SLI15	P38283	698 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	HXT5	P38695	592 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	ERV46	P39727	415 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	EDC3	P39998	551 aa	Known RBP	4.06	□□□□□ -1.76
PMC1	YGL006W	YNL260C	P53846	198 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	YNL140C	P53910	189 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	SRP1	Q02821	542 aa	Known RBP	4.06	□□□□□ -1.76
PMC1	YGL006W	AIM36	Q03798	255 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	RBS1	Q05672	457 aa	Known RBP	4.06	□□□□□ -1.76
PMC1	YGL006W	ECM7	Q06200	448 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	GUD1	Q07729	489 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	DCI1	Q08558	271 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	SIA1	Q12212	622 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	PNS1	Q12412	539 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	YKL018C-A	Q3E7A7	99 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	IPP1	P00817	287 aa	Known RBP	4.06	□□□□□ -1.76
PMC1	YGL006W	GCN4	P03069	281 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	RPP1B	P10622	106 aa	Known RBP	4.06	□□□□□ -1.76
PMC1	YGL006W	STF2	P16965	84 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	SYP1	P25623	870 aa	Known RBP	4.06	□□□□□ -1.76
PMC1	YGL006W	ECM25	P32525	599 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	CSE2	P33308	149 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	SRY1	P36007	326 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	YHR122W	P38829	231 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	NVJ1	P38881	321 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	HXT9	P40885	567 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	LSM1	P47017	172 aa	Known RBP	4.06	□□□□□ -1.76
PMC1	YGL006W	SPT20	P50875	604 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
PMC1	YGL006W	MSC2	Q03455	724 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	HRD3	Q05787	833 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	FRE5	Q08908	694 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	YLR099W-A	Q3E798	87 aa		4.06	□□□□□ -1.76
PMC1	YGL006W	CDC19	P00549	500 aa	Known RBP	4.05	□□□□□ -1.76
PMC1	YGL006W	HIS5	P07172	385 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	PRE4	P30657	266 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	MF(ALPHA)2	P32435	120 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	MRT4	P33201	236 aa	Known RBP	4.05	□□□□□ -1.76
PMC1	YGL006W	TEF4	P36008	412 aa	Known RBP	4.05	□□□□□ -1.76
PMC1	YGL006W	FLR1	P38124	548 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	FMP23	P38231	175 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	LAG1	P38703	411 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	SPO73	P40031	143 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	LSM5	P40089	93 aa	Known RBP	4.05	□□□□□ -1.76
PMC1	YGL006W	NDE1	P40215	560 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YIL166C	P40445	542 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YIL077C	P40508	320 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TIS11	P47977	285 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	MPC1	P53157	130 aa	Known RBP	4.05	□□□□□ -1.76
PMC1	YGL006W	YLR257W	Q06146	321 aa	Known RBP	4.05	□□□□□ -1.76
PMC1	YGL006W	MFG1	Q07684	458 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YOR283W	Q12040	230 aa	Known RBP	4.05	□□□□□ -1.76
PMC1	YGL006W	TIR4	Q12218	487 aa	Predicted RBP	4.05	□□□□□ -1.76
PMC1	YGL006W	ICT1	Q12385	394 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YOR019W	Q99248	730 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	RAS1	P01119	309 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	ACB1	P31787	87 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	MSN2	P33748	704 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YHL041W	P38730	149 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	OCA5	P38738	679 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YHR054C	P38780	354 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	RSC30	P38781	883 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	CTF8	P38877	133 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	AYR1	P40471	297 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	GAB1	P41733	394 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	SCW11	P53189	542 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	BUD17	P53727	317 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YAF9	P53930	226 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	IRC15	Q02733	499 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	PRM15	Q03262	622 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	GCN5	Q03330	439 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YMR321C	Q04898	105 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YPR011C	Q12251	326 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YPL119C-A	Q3E751	87 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	HRP1	Q99383	534 aa	Known RBP	4.05	□□□□□ -1.76
PMC1	YGL006W	Q0010	Q9ZZX9	128 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TY1A-DR4	O74302	440 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	HTA2	P04912	132 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	SPS2	P08459	502 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TY1A-A	P0CX57	440 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TY1A-PR1	P0CX58	440 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TY1A-OR	P0CX59	440 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TY1A-PR2	P0CX60	440 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TY1A-DR5	P0CX65	440 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TY1A-ER2	P0CX66	440 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TY1A-GR3	P0CX67	440 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TY1A-LR1	P0CX68	440 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	TY1A-MR2	P0CX69	440 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	GAL2	P13181	574 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	MRP20	P32387	263 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	PDC2	P32896	925 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	VPS17	P32913	551 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YRO2	P38079	344 aa		4.05	□□□□□ -1.76
PMC1	YGL006W	YBR063C	P38083	404 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms