RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W MMS4P38257 691 aa3.26□□□□□ -1.89
RPN9YDR427W RRP4P38792 359 aaKnown RBP3.26□□□□□ -1.89
RPN9YDR427W CAK1P43568 368 aaPredicted RBP3.26□□□□□ -1.89
RPN9YDR427W AZR1P50080 613 aa3.26□□□□□ -1.89
RPN9YDR427W CWC25P53854 179 aaKnown RBP3.26□□□□□ -1.89
RPN9YDR427W URH1Q04179 340 aa3.26□□□□□ -1.89
RPN9YDR427W YMR130WQ04223 302 aa3.26□□□□□ -1.89
RPN9YDR427W SNT309Q06091 175 aaPredicted RBP3.26□□□□□ -1.89
RPN9YDR427W DCS1Q06151 350 aa3.26□□□□□ -1.89
RPN9YDR427W MHR1Q06630 226 aa3.26□□□□□ -1.89
RPN9YDR427W ADE4P04046 510 aaKnown RBP3.25□□□□□ -1.89
RPN9YDR427W SPO7P18410 259 aa3.25□□□□□ -1.89
RPN9YDR427W MNS1P32906 549 aa3.25□□□□□ -1.89
RPN9YDR427W SLM4P38247 162 aa3.25□□□□□ -1.89
RPN9YDR427W JLP2P40206 208 aa3.25□□□□□ -1.89
RPN9YDR427W YPS6P40583 537 aa3.25□□□□□ -1.89
RPN9YDR427W TCB2P48231 1178 aa3.25□□□□□ -1.89
RPN9YDR427W PHB2P50085 310 aa3.25□□□□□ -1.89
RPN9YDR427W YLR152CP54072 576 aa3.25□□□□□ -1.89
RPN9YDR427W HOT1Q03213 719 aa3.25□□□□□ -1.89
RPN9YDR427W RBD2Q12270 262 aa3.25□□□□□ -1.89
RPN9YDR427W ATG34Q12292 412 aa3.25□□□□□ -1.89
RPN9YDR427W TY1B-AO13527 1196 aaKnown RBP3.24□□□□□ -1.89
RPN9YDR427W ARO3P14843 370 aaKnown RBP3.24□□□□□ -1.89
RPN9YDR427W CPR2P23285 205 aa3.24□□□□□ -1.89
RPN9YDR427W CLB1P24868 471 aa3.24□□□□□ -1.89
RPN9YDR427W HXT1P32465 570 aa3.24□□□□□ -1.89
RPN9YDR427W SFH5P47008 294 aa3.24□□□□□ -1.89
RPN9YDR427W OAZ1Q02803 292 aa3.24□□□□□ -1.89
RPN9YDR427W RPN9Q04062 393 aaKnown RBP3.24□□□□□ -1.89
RPN9YDR427W BCH1Q05029 724 aa3.24□□□□□ -1.89
RPN9YDR427W MED2Q12124 431 aa3.24□□□□□ -1.89
RPN9YDR427W TFB1P32776 642 aa3.23□□□□□ -1.89
RPN9YDR427W YGL039WP53183 348 aaKnown RBP3.23□□□□□ -1.89
RPN9YDR427W RHO5P53879 331 aaKnown RBP3.23□□□□□ -1.89
RPN9YDR427W OCA2P53949 197 aa3.23□□□□□ -1.89
RPN9YDR427W TMC1Q08422 150 aaPredicted RBP3.23□□□□□ -1.89
RPN9YDR427W RVS161P25343 265 aaKnown RBP3.22□□□□□ -1.89
RPN9YDR427W POP5P28005 173 aa3.22□□□□□ -1.89
RPN9YDR427W SER3P40054 469 aa3.22□□□□□ -1.89
RPN9YDR427W VHS2P40463 436 aa3.22□□□□□ -1.89
RPN9YDR427W RMT2Q03305 412 aa3.22□□□□□ -1.89
RPN9YDR427W YMR027WQ04371 470 aa3.22□□□□□ -1.89
RPN9YDR427W TPT1Q12272 230 aaKnown RBP3.22□□□□□ -1.89
RPN9YDR427W SNU66Q12420 587 aaPredicted RBP3.22□□□□□ -1.89
RPN9YDR427W MTR10Q99189 972 aa3.22□□□□□ -1.89
RPN9YDR427W IMA3P0CW40 589 aa3.21□□□□□ -1.9
RPN9YDR427W IMA4P0CW41 589 aa3.21□□□□□ -1.9
RPN9YDR427W GAT2P40209 560 aa3.21□□□□□ -1.9
RPN9YDR427W TIS11P47977 285 aa3.21□□□□□ -1.9
RPN9YDR427W BRO1P48582 844 aa3.21□□□□□ -1.9
RPN9YDR427W RRP9Q06506 573 aaKnown RBP3.21□□□□□ -1.9
RPN9YDR427W IMA2Q08295 589 aa3.21□□□□□ -1.9
RPN9YDR427W WTM1Q12363 437 aaKnown RBP3.21□□□□□ -1.9
RPN9YDR427W RRP1P35178 278 aaPredicted RBP3.2□□□□□ -1.9
RPN9YDR427W ASC1P38011 319 aaKnown RBP3.2□□□□□ -1.9
RPN9YDR427W SIM1P40472 476 aa3.2□□□□□ -1.9
RPN9YDR427W ZIM17P42844 174 aa3.2□□□□□ -1.9
RPN9YDR427W PEX25Q02969 394 aa3.2□□□□□ -1.9
RPN9YDR427W PRP42Q03776 544 aaKnown RBP3.2□□□□□ -1.9
RPN9YDR427W UAF30Q08747 228 aa3.2□□□□□ -1.9
RPN9YDR427W RAX1Q08760 435 aa3.2□□□□□ -1.9
RPN9YDR427W YRM1Q12340 786 aa3.2□□□□□ -1.9
RPN9YDR427W DBF4P32325 704 aa3.19□□□□□ -1.9
RPN9YDR427W PHA2P32452 334 aa3.19□□□□□ -1.9
RPN9YDR427W CHK1P38147 527 aa3.19□□□□□ -1.9
RPN9YDR427W SBE22P38814 852 aa3.19□□□□□ -1.9
RPN9YDR427W MDE1P47095 244 aa3.19□□□□□ -1.9
RPN9YDR427W SHY1P53266 389 aa3.19□□□□□ -1.9
RPN9YDR427W AIM32Q04689 311 aa3.19□□□□□ -1.9
RPN9YDR427W IRC25Q07951 179 aa3.19□□□□□ -1.9
RPN9YDR427W VPS54Q12071 889 aa3.19□□□□□ -1.9
RPN9YDR427W RUP1Q12242 671 aa3.19□□□□□ -1.9
RPN9YDR427W HOM3P10869 527 aa3.18□□□□□ -1.9
RPN9YDR427W MDH1P17505 334 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
RPN9YDR427W YCL068CP25593 260 aa3.18□□□□□ -1.9
RPN9YDR427W CSE2P33308 149 aa3.18□□□□□ -1.9
RPN9YDR427W ZTA1P38230 334 aaKnown RBP3.18□□□□□ -1.9
RPN9YDR427W STN1P38960 494 aa3.18□□□□□ -1.9
RPN9YDR427W YJR085CP47131 105 aaKnown RBP3.18□□□□□ -1.9
RPN9YDR427W STD1Q02794 444 aa3.18□□□□□ -1.9
RPN9YDR427W YLR456WQ06199 204 aa3.18□□□□□ -1.9
RPN9YDR427W PLP2Q12017 286 aa3.18□□□□□ -1.9
RPN9YDR427W AEP3Q12089 606 aa3.18□□□□□ -1.9
RPN9YDR427W ISA2Q12425 185 aa3.18□□□□□ -1.9
RPN9YDR427W HEL1P36113 551 aa3.17□□□□□ -1.9
RPN9YDR427W OLA1P38219 394 aaKnown RBP3.17□□□□□ -1.9
RPN9YDR427W CHS6P40955 746 aa3.17□□□□□ -1.9
RPN9YDR427W YGR111WP53265 400 aa3.17□□□□□ -1.9
RPN9YDR427W COS1P53822 381 aa3.17□□□□□ -1.9
RPN9YDR427W MTQ1P53944 314 aa3.17□□□□□ -1.9
RPN9YDR427W MMT1Q03218 510 aa3.17□□□□□ -1.9
RPN9YDR427W CCE1Q03702 353 aa3.17□□□□□ -1.9
RPN9YDR427W TSA2Q04120 196 aa3.17□□□□□ -1.9
RPN9YDR427W YDR341CQ05506 607 aaKnown RBP3.17□□□□□ -1.9
RPN9YDR427W SOD1P00445 154 aaKnown RBP3.16□□□□□ -1.9
RPN9YDR427W EXG1P23776 448 aaKnown RBP3.16□□□□□ -1.9
RPN9YDR427W PRS1P32895 427 aaKnown RBP3.16□□□□□ -1.9
RPN9YDR427W YBR056WP38081 501 aa3.16□□□□□ -1.9
RPN9YDR427W GAB1P41733 394 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms