RNA–Protein interactions for RNA: Q0140

VAR1, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene VAR1, Length 1,197 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAR1Q0140 CLN1P20437 546 aa2.13□□□□□ -2.07
VAR1Q0140 OLE1P21147 510 aaKnown RBP2.13□□□□□ -2.07
VAR1Q0140 VHC1P38329 1120 aa2.13□□□□□ -2.07
VAR1Q0140 PTI1P39927 425 aaPredicted RBP2.13□□□□□ -2.07
VAR1Q0140 VPS75P53853 264 aa2.13□□□□□ -2.07
VAR1Q0140 OAZ1Q02803 292 aa2.13□□□□□ -2.07
VAR1Q0140 MCM10P32354 571 aa2.12□□□□□ -2.07
VAR1Q0140 PMT1P33775 817 aa2.12□□□□□ -2.07
VAR1Q0140 PRY2P36110 329 aa2.12□□□□□ -2.07
VAR1Q0140 STP2P38704 541 aa2.12□□□□□ -2.07
VAR1Q0140 YEL057CP39983 233 aa2.12□□□□□ -2.07
VAR1Q0140 NOP16P40007 231 aaKnown RBP2.12□□□□□ -2.07
VAR1Q0140 ZRC1P20107 442 aa2.11□□□□□ -2.07
VAR1Q0140 PHA2P32452 334 aa2.11□□□□□ -2.07
VAR1Q0140 ECT1P33412 323 aa2.11□□□□□ -2.07
VAR1Q0140 RRP1P35178 278 aaPredicted RBP2.11□□□□□ -2.07
VAR1Q0140 ANR2P36090 516 aaPredicted RBP2.11□□□□□ -2.07
VAR1Q0140 FUI1P38196 639 aa2.11□□□□□ -2.07
VAR1Q0140 RFC3P38629 340 aa2.11□□□□□ -2.07
VAR1Q0140 WSS1P38838 269 aa2.11□□□□□ -2.07
VAR1Q0140 HXT14P42833 540 aa2.11□□□□□ -2.07
VAR1Q0140 RMD8P43620 662 aa2.11□□□□□ -2.07
VAR1Q0140 PHB2P50085 310 aa2.11□□□□□ -2.07
VAR1Q0140 YMR102CQ03177 834 aa2.11□□□□□ -2.07
VAR1Q0140 HOT1Q03213 719 aa2.11□□□□□ -2.07
VAR1Q0140 RAX1Q08760 435 aa2.11□□□□□ -2.07
VAR1Q0140 ATG29Q12092 213 aa2.11□□□□□ -2.07
VAR1Q0140 NAG1Q8TGN9 163 aa2.11□□□□□ -2.07
VAR1Q0140 HAC1P41546 238 aa2.1□□□□□ -2.07
VAR1Q0140 GPI15P53961 229 aa2.1□□□□□ -2.07
VAR1Q0140 SRL2Q12020 392 aa2.1□□□□□ -2.07
VAR1Q0140 ENT1Q12518 454 aa2.1□□□□□ -2.07
VAR1Q0140 SAL1D6W196 494 aa2.09□□□□□ -2.07
VAR1Q0140 PTK1P36002 662 aaPredicted RBP2.09□□□□□ -2.07
VAR1Q0140 IGD1P43598 195 aa2.09□□□□□ -2.07
VAR1Q0140 MDM36Q06820 579 aa2.09□□□□□ -2.07
VAR1Q0140 TPT1Q12272 230 aaKnown RBP2.09□□□□□ -2.07
VAR1Q0140 APC2Q12440 853 aa2.09□□□□□ -2.07
VAR1Q0140 AAC3P18238 307 aa2.08□□□□□ -2.08
VAR1Q0140 YCL068CP25593 260 aa2.08□□□□□ -2.08
VAR1Q0140 CYM1P32898 989 aa2.08□□□□□ -2.08
VAR1Q0140 AIM24P47127 394 aa2.08□□□□□ -2.08
VAR1Q0140 CLD1P53264 445 aa2.08□□□□□ -2.08
VAR1Q0140 SMC5Q08204 1093 aa2.08□□□□□ -2.08
VAR1Q0140 RIM20Q12033 661 aa2.08□□□□□ -2.08
VAR1Q0140 YDR061WQ12298 539 aa2.08□□□□□ -2.08
VAR1Q0140 GCN4P03069 281 aa2.07□□□□□ -2.08
VAR1Q0140 OCA4P25366 362 aa2.07□□□□□ -2.08
VAR1Q0140 SIN4P32259 974 aa2.07□□□□□ -2.08
VAR1Q0140 SSH4P32343 579 aa2.07□□□□□ -2.08
VAR1Q0140 YME2P32843 850 aa2.07□□□□□ -2.08
VAR1Q0140 MAM33P40513 266 aa2.07□□□□□ -2.08
VAR1Q0140 SKI8Q02793 397 aaPredicted RBP2.07□□□□□ -2.08
VAR1Q0140 TPI1P00942 248 aaKnown RBP2.06□□□□□ -2.08
VAR1Q0140 PUT4P15380 627 aa2.06□□□□□ -2.08
VAR1Q0140 MET8P15807 274 aa2.06□□□□□ -2.08
VAR1Q0140 TFB1P32776 642 aa2.06□□□□□ -2.08
VAR1Q0140 CHL4P38907 458 aa2.06□□□□□ -2.08
VAR1Q0140 LCB3P47013 409 aa2.06□□□□□ -2.08
VAR1Q0140 CCE1Q03702 353 aa2.06□□□□□ -2.08
VAR1Q0140 MFG1Q07684 458 aa2.06□□□□□ -2.08
VAR1Q0140 PPH22P23595 377 aa2.05□□□□□ -2.08
VAR1Q0140 DEP1P31385 405 aa2.05□□□□□ -2.08
VAR1Q0140 YAL037WP39728 267 aa2.05□□□□□ -2.08
VAR1Q0140 FRT2P39734 528 aa2.05□□□□□ -2.08
VAR1Q0140 YNL208WP40159 199 aaKnown RBP2.05□□□□□ -2.08
VAR1Q0140 RPN14P53196 417 aa2.05□□□□□ -2.08
VAR1Q0140 TAF12Q03761 539 aa2.05□□□□□ -2.08
VAR1Q0140 RRP9Q06506 573 aaKnown RBP2.05□□□□□ -2.08
VAR1Q0140 DPH5P32469 300 aaPredicted RBP2.04□□□□□ -2.08
VAR1Q0140 YHK8P38776 514 aa2.04□□□□□ -2.08
VAR1Q0140 PFS1P38872 237 aa2.04□□□□□ -2.08
VAR1Q0140 YJR008WP47085 338 aa2.04□□□□□ -2.08
VAR1Q0140 CPR7P47103 393 aa2.04□□□□□ -2.08
VAR1Q0140 YGR067CP53243 804 aa2.04□□□□□ -2.08
VAR1Q0140 RPL21AQ02753 160 aaKnown RBP2.04□□□□□ -2.08
VAR1Q0140 TDA1Q03533 586 aa2.04□□□□□ -2.08
VAR1Q0140 RQC1Q05468 723 aaKnown RBP2.04□□□□□ -2.08
VAR1Q0140 MDM30Q05930 598 aa2.04□□□□□ -2.08
VAR1Q0140 EAF3Q12432 401 aa2.04□□□□□ -2.08
VAR1Q0140 RPL21BQ12672 160 aaKnown RBP2.04□□□□□ -2.08
VAR1Q0140 TY1B-AO13527 1196 aaKnown RBP2.03□□□□□ -2.08
VAR1Q0140 COX13P32799 129 aa2.03□□□□□ -2.08
VAR1Q0140 APE3P37302 537 aaKnown RBP2.03□□□□□ -2.08
VAR1Q0140 GIP3Q03016 1276 aa2.03□□□□□ -2.08
VAR1Q0140 RPS19AP07280 144 aaKnown RBP2.02□□□□□ -2.09
VAR1Q0140 RPS19BP07281 144 aaPredicted RBP2.02□□□□□ -2.09
VAR1Q0140 YEF1P32622 495 aa2.02□□□□□ -2.09
VAR1Q0140 SPO73P40031 143 aa2.02□□□□□ -2.09
VAR1Q0140 RPS0BP46654 252 aaKnown RBP2.02□□□□□ -2.09
VAR1Q0140 ALF1P53904 254 aa2.02□□□□□ -2.09
VAR1Q0140 TRX2P22803 104 aaKnown RBP2.01□□□□□ -2.09
VAR1Q0140 RHB1P25378 209 aa2.01□□□□□ -2.09
VAR1Q0140 AGA2P32781 87 aa2.01□□□□□ -2.09
VAR1Q0140 LOT6Q07923 191 aa2.01□□□□□ -2.09
VAR1Q0140 CEX1Q12453 761 aa2.01□□□□□ -2.09
VAR1Q0140 KRE2P27809 442 aa2□□□□□ -2.09
VAR1Q0140 HXT3P32466 567 aaKnown RBP2□□□□□ -2.09
VAR1Q0140 SKN1P33336 771 aa2□□□□□ -2.09
VAR1Q0140 SOR1P35497 357 aaKnown RBP2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms