RNA–Protein interactions for RNA: YJR143C

PMT4, Transcript of Protein O-mannosyltransferase, yeast

Gene PMT4, Length 2,289 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMT4	YJR143C	YGR067C	P53243	804 aa		4.28	□□□□□ -1.72
PMT4	YJR143C	GTF1	P53260	183 aa	Predicted RBP	4.28	□□□□□ -1.72
PMT4	YJR143C	MAL12	P53341	584 aa		4.28	□□□□□ -1.72
PMT4	YJR143C	CUS2	P53830	285 aa	Predicted RBP	4.28	□□□□□ -1.72
PMT4	YJR143C	IST1	P53843	298 aa	Predicted RBP	4.28	□□□□□ -1.72
PMT4	YJR143C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
PMT4	YJR143C	YNL146W	P53906	100 aa		4.28	□□□□□ -1.72
PMT4	YJR143C	ERG5	P54781	538 aa		4.28	□□□□□ -1.72
PMT4	YJR143C	TAF12	Q03761	539 aa		4.28	□□□□□ -1.72
PMT4	YJR143C	BTS1	Q12051	335 aa		4.28	□□□□□ -1.72
PMT4	YJR143C	ADE5,7	P07244	802 aa	Known RBP	4.27	□□□□□ -1.73
PMT4	YJR143C	GDH1	P07262	454 aa	Known RBP	4.27	□□□□□ -1.73
PMT4	YJR143C	PBN1	P25580	416 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	DEG1	P31115	442 aa	Known RBP	4.27	□□□□□ -1.73
PMT4	YJR143C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
PMT4	YJR143C	COS9	P36034	407 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	ICS2	P38284	255 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	RRP4	P38792	359 aa	Known RBP	4.27	□□□□□ -1.73
PMT4	YJR143C	RTT107	P38850	1070 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	SPC97	P38863	823 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	YER130C	P39959	443 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	YEL020C	P39994	560 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	PIG2	P40187	538 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	PTR3	P43606	678 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	SAM50	P53969	484 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	YMR310C	Q04867	317 aa	Predicted RBP	4.27	□□□□□ -1.73
PMT4	YJR143C	RTT103	Q05543	409 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	PIG1	Q06216	648 aa		4.27	□□□□□ -1.73
PMT4	YJR143C	PRP46	Q12417	451 aa	Predicted RBP	4.27	□□□□□ -1.73
PMT4	YJR143C	SCEI	P03882	235 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	RHO1	P06780	209 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	HIS5	P07172	385 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	YPK1	P12688	680 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	FRS2	P15625	503 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	GPI12	P23797	304 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
PMT4	YJR143C	SOF1	P33750	489 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	RPL32	P38061	130 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	VHC1	P38329	1120 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	ERG10	P41338	398 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	EAF7	P53911	425 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	YMR087W	Q04299	284 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	GRS2	Q06817	618 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	YPR022C	Q12139	1133 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	GLE1	Q12315	538 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	RAD9	P14737	1309 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	RAD3	P06839	778 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	PEP4	P07267	405 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	CHS1	P08004	1131 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	CDC6	P09119	513 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	RPS16A	P0CX51	143 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	RPS16B	P0CX52	143 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	ADE1	P27616	306 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	LAC1	P28496	418 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	GDH2	P33327	1092 aa	Known RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	CTP1	P38152	299 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	UBA4	P38820	440 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	LNP1	P38878	278 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	ICP55	P40051	511 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	HXT9	P40885	567 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	GLG2	P47011	380 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	YDL186W	P48568	277 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	HXT11	P54862	567 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	SPP2	Q02521	185 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	BNA7	Q04066	261 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	PDR8	Q06149	701 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	DNL4	Q08387	944 aa	Predicted RBP	4.26	□□□□□ -1.73
PMT4	YJR143C	PEX27	Q08580	376 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	NPC2	Q12408	173 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	UBA3	Q99344	299 aa		4.26	□□□□□ -1.73
PMT4	YJR143C	YMR085W	P0CF18	432 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	ATP10	P18496	279 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	ZRC1	P20107	442 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	MSS51	P32335	436 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	ECM25	P32525	599 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	RGT1	P32862	1170 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	SOR1	P35497	357 aa	Known RBP	4.25	□□□□□ -1.73
PMT4	YJR143C	YKL071W	P36086	256 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	RPF2	P36160	344 aa	Known RBP	4.25	□□□□□ -1.73
PMT4	YJR143C	RTC2	P38279	296 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	ANS1	P38832	159 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	GAT2	P40209	560 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	SAD1	P43589	448 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	HIT1	P46973	164 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	LOH1	P47055	219 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	BUD17	P53727	317 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	YML053C	Q04978	212 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	SNT309	Q06091	175 aa	Predicted RBP	4.25	□□□□□ -1.73
PMT4	YJR143C	SOR2	Q07786	357 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	YLR040C	Q07988	224 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	BRX1	Q08235	291 aa	Known RBP	4.25	□□□□□ -1.73
PMT4	YJR143C	SRO7	Q12038	1033 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	LCB4	Q12246	624 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	ADH2	P00331	348 aa	Known RBP	4.25	□□□□□ -1.73
PMT4	YJR143C	RHO2	P06781	192 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	TCP1	P12612	559 aa	Known RBP	4.25	□□□□□ -1.73
PMT4	YJR143C	COQ1	P18900	473 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	PEX3	P28795	441 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	YPK3	P38070	525 aa		4.25	□□□□□ -1.73
PMT4	YJR143C	MMS21	P38632	267 aa		4.25	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms