RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W OTU2P38747 307 aaKnown RBP3.43□□□□□ -1.86
SEC28YIL076W YDL121CQ07541 149 aa3.43□□□□□ -1.86
SEC28YIL076W RMD5Q12508 421 aa3.43□□□□□ -1.86
SEC28YIL076W MET17P06106 444 aa3.42□□□□□ -1.86
SEC28YIL076W ILV5P06168 395 aaKnown RBP3.42□□□□□ -1.86
SEC28YIL076W MRP21P38175 177 aa3.42□□□□□ -1.86
SEC28YIL076W UTP9P38882 575 aaKnown RBP3.42□□□□□ -1.86
SEC28YIL076W AZR1P50080 613 aa3.42□□□□□ -1.86
SEC28YIL076W BET5Q03630 159 aa3.42□□□□□ -1.86
SEC28YIL076W REX4Q08237 289 aa3.42□□□□□ -1.86
SEC28YIL076W YRM1Q12340 786 aa3.42□□□□□ -1.86
SEC28YIL076W RRI2Q12348 645 aa3.42□□□□□ -1.86
SEC28YIL076W MRP7P12687 371 aa3.41□□□□□ -1.86
SEC28YIL076W HSP26P15992 214 aaKnown RBP RIP-Chip data3.41□□□□□ -1.86not detected
SEC28YIL076W SIN4P32259 974 aa3.41□□□□□ -1.86
SEC28YIL076W NUP2P32499 720 aa3.41□□□□□ -1.86
SEC28YIL076W RFC3P38629 340 aa3.41□□□□□ -1.86
SEC28YIL076W MNP1P53163 194 aaPredicted RBP3.41□□□□□ -1.86
SEC28YIL076W APJ1P53940 528 aa3.41□□□□□ -1.86
SEC28YIL076W RPA49Q01080 415 aaPredicted RBP3.41□□□□□ -1.86
SEC28YIL076W VTA1Q06263 330 aa3.41□□□□□ -1.86
SEC28YIL076W CUE5Q08412 411 aaKnown RBP3.41□□□□□ -1.86
SEC28YIL076W ROX1P25042 368 aa3.4□□□□□ -1.87
SEC28YIL076W CSE2P33308 149 aa3.4□□□□□ -1.87
SEC28YIL076W ARA1P38115 344 aa3.4□□□□□ -1.87
SEC28YIL076W AIM10P39965 576 aaKnown RBP3.4□□□□□ -1.87
SEC28YIL076W UTP18P40362 594 aaPredicted RBP3.4□□□□□ -1.87
SEC28YIL076W GAB1P41733 394 aa3.4□□□□□ -1.87
SEC28YIL076W IRC6P43615 237 aa3.4□□□□□ -1.87
SEC28YIL076W YJR011CP47086 261 aaPredicted RBP3.4□□□□□ -1.87
SEC28YIL076W CKA1P15790 372 aa3.39□□□□□ -1.87
SEC28YIL076W RAD57P25301 460 aa3.39□□□□□ -1.87
SEC28YIL076W CTR86P25355 563 aa3.39□□□□□ -1.87
SEC28YIL076W RPS0BP46654 252 aaKnown RBP3.39□□□□□ -1.87
SEC28YIL076W RHO5P53879 331 aaKnown RBP3.39□□□□□ -1.87
SEC28YIL076W MDM30Q05930 598 aa3.39□□□□□ -1.87
SEC28YIL076W SKI7Q08491 747 aaPredicted RBP3.39□□□□□ -1.87
SEC28YIL076W AHC1Q12433 566 aa3.39□□□□□ -1.87
SEC28YIL076W NPL6P32832 435 aa3.38□□□□□ -1.87
SEC28YIL076W HCS1P34243 683 aa3.38□□□□□ -1.87
SEC28YIL076W PHB2P50085 310 aa3.38□□□□□ -1.87
SEC28YIL076W FMS1P50264 508 aa3.38□□□□□ -1.87
SEC28YIL076W SPO12P17123 173 aa3.37□□□□□ -1.87
SEC28YIL076W RHB1P25378 209 aa3.37□□□□□ -1.87
SEC28YIL076W KRE2P27809 442 aa3.37□□□□□ -1.87
SEC28YIL076W BEM1P29366 551 aa3.37□□□□□ -1.87
SEC28YIL076W JLP2P40206 208 aa3.37□□□□□ -1.87
SEC28YIL076W DLD2P46681 530 aaKnown RBP3.37□□□□□ -1.87
SEC28YIL076W MDE1P47095 244 aa3.37□□□□□ -1.87
SEC28YIL076W YJR085CP47131 105 aaKnown RBP3.37□□□□□ -1.87
SEC28YIL076W GPI15P53961 229 aa3.37□□□□□ -1.87
SEC28YIL076W YOL159C-AQ3E769 90 aa3.37□□□□□ -1.87
SEC28YIL076W NAM2P11325 894 aa3.36□□□□□ -1.87
SEC28YIL076W SPO7P18410 259 aa3.36□□□□□ -1.87
SEC28YIL076W SAS3P34218 831 aa3.36□□□□□ -1.87
SEC28YIL076W PCF11P39081 626 aaPredicted RBP3.36□□□□□ -1.87
SEC28YIL076W MRPL19P53875 158 aa3.36□□□□□ -1.87
SEC28YIL076W BCH1Q05029 724 aa3.36□□□□□ -1.87
SEC28YIL076W VAM3Q12241 283 aa3.36□□□□□ -1.87
SEC28YIL076W IZH2Q12442 317 aa3.36□□□□□ -1.87
SEC28YIL076W RTN2Q12443 393 aa3.36□□□□□ -1.87
SEC28YIL076W RML2P32611 393 aa3.35□□□□□ -1.87
SEC28YIL076W SOR1P35497 357 aaKnown RBP3.35□□□□□ -1.87
SEC28YIL076W MID2P36027 376 aa3.35□□□□□ -1.87
SEC28YIL076W OAZ1Q02803 292 aa3.35□□□□□ -1.87
SEC28YIL076W SOR2Q07786 357 aa3.35□□□□□ -1.87
SEC28YIL076W CLN1P20437 546 aa3.34□□□□□ -1.87
SEC28YIL076W SMY1P32364 656 aaKnown RBP3.34□□□□□ -1.87
SEC28YIL076W APE3P37302 537 aaKnown RBP3.34□□□□□ -1.87
SEC28YIL076W MIG3P39943 394 aa3.34□□□□□ -1.87
SEC28YIL076W NUP116Q02630 1113 aa3.34□□□□□ -1.87
SEC28YIL076W GIP3Q03016 1276 aa3.34□□□□□ -1.87
SEC28YIL076W RRP45Q05636 305 aaKnown RBP3.34□□□□□ -1.87
SEC28YIL076W PLP2Q12017 286 aa3.34□□□□□ -1.87
SEC28YIL076W HSP42Q12329 375 aa3.34□□□□□ -1.87
SEC28YIL076W GEX1P25596 615 aa3.33□□□□□ -1.88
SEC28YIL076W HIR2P32480 875 aa3.33□□□□□ -1.88
SEC28YIL076W YAL037WP39728 267 aa3.33□□□□□ -1.88
SEC28YIL076W SFH5P47008 294 aa3.33□□□□□ -1.88
SEC28YIL076W MTQ1P53944 314 aa3.33□□□□□ -1.88
SEC28YIL076W ADA2Q02336 434 aa3.33□□□□□ -1.88
SEC28YIL076W RKM1Q08961 583 aaPredicted RBP3.33□□□□□ -1.88
SEC28YIL076W RED1P14291 827 aa3.32□□□□□ -1.88
SEC28YIL076W TAF12Q03761 539 aa3.32□□□□□ -1.88
SEC28YIL076W SRL2Q12020 392 aa3.32□□□□□ -1.88
SEC28YIL076W SCEIP03882 235 aa3.31□□□□□ -1.88
SEC28YIL076W CLC1P17891 233 aa3.31□□□□□ -1.88
SEC28YIL076W CLB3P24870 427 aa3.31□□□□□ -1.88
SEC28YIL076W RTC2P38279 296 aa3.31□□□□□ -1.88
SEC28YIL076W SBE22P38814 852 aa3.31□□□□□ -1.88
SEC28YIL076W NDE1P40215 560 aa3.31□□□□□ -1.88
SEC28YIL076W DFG10P40526 253 aa3.31□□□□□ -1.88
SEC28YIL076W PHO86P46956 311 aa3.31□□□□□ -1.88
SEC28YIL076W COS5P47187 383 aa3.31□□□□□ -1.88
SEC28YIL076W RNY1Q02933 434 aaKnown RBP3.31□□□□□ -1.88
SEC28YIL076W TAF11Q04226 346 aa3.31□□□□□ -1.88
SEC28YIL076W COS7Q07788 383 aa3.31□□□□□ -1.88
SEC28YIL076W SRV2P17555 526 aaKnown RBP3.3□□□□□ -1.88
SEC28YIL076W ERG3P32353 365 aa3.3□□□□□ -1.88
SEC28YIL076W NTC20P38302 140 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms