RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W LAM5P43560 674 aa3.34□□□□□ -1.87
RPN9YDR427W YGL138CP53122 345 aa3.34□□□□□ -1.87
RPN9YDR427W TSR1Q07381 788 aaKnown RBP3.34□□□□□ -1.87
RPN9YDR427W BSC6Q08280 497 aa3.34□□□□□ -1.87
RPN9YDR427W SGT1Q08446 395 aa3.34□□□□□ -1.87
RPN9YDR427W ARG4P04076 463 aaPredicted RBP3.33□□□□□ -1.88
RPN9YDR427W ILV5P06168 395 aaKnown RBP3.33□□□□□ -1.88
RPN9YDR427W FUR1P18562 216 aaKnown RBP3.33□□□□□ -1.88
RPN9YDR427W LSB5P25369 354 aa3.33□□□□□ -1.88
RPN9YDR427W RHB1P25378 209 aa3.33□□□□□ -1.88
RPN9YDR427W ADK2P26364 225 aa3.33□□□□□ -1.88
RPN9YDR427W BEM1P29366 551 aa3.33□□□□□ -1.88
RPN9YDR427W KAP120Q02932 1032 aa3.33□□□□□ -1.88
RPN9YDR427W DON1Q05610 365 aa3.33□□□□□ -1.88
RPN9YDR427W SKI7Q08491 747 aaPredicted RBP3.33□□□□□ -1.88
RPN9YDR427W YRF1-4O13559 1382 aa3.33□□□□□ -1.88
RPN9YDR427W TEF1P02994 458 aaKnown RBP3.32□□□□□ -1.88
RPN9YDR427W SCEIP03882 235 aa3.32□□□□□ -1.88
RPN9YDR427W ISY1P21374 235 aaPredicted RBP3.32□□□□□ -1.88
RPN9YDR427W REC107P21651 314 aa3.32□□□□□ -1.88
RPN9YDR427W LDB16P25587 256 aa3.32□□□□□ -1.88
RPN9YDR427W PRM5P40476 318 aa3.32□□□□□ -1.88
RPN9YDR427W MTM1P53320 366 aa3.32□□□□□ -1.88
RPN9YDR427W BNI5P53890 448 aaKnown RBP3.32□□□□□ -1.88
RPN9YDR427W TAF12Q03761 539 aa3.32□□□□□ -1.88
RPN9YDR427W ROY1Q04847 553 aa3.32□□□□□ -1.88
RPN9YDR427W PDX1P16451 410 aa3.31□□□□□ -1.88
RPN9YDR427W URA7P28274 579 aaKnown RBP3.31□□□□□ -1.88
RPN9YDR427W SMY1P32364 656 aaKnown RBP3.31□□□□□ -1.88
RPN9YDR427W NIP1P32497 812 aaKnown RBP3.31□□□□□ -1.88
RPN9YDR427W SOR1P35497 357 aaKnown RBP3.31□□□□□ -1.88
RPN9YDR427W YAL037WP39728 267 aa3.31□□□□□ -1.88
RPN9YDR427W WWM1P43582 211 aaKnown RBP3.31□□□□□ -1.88
RPN9YDR427W HMS2P47175 358 aa3.31□□□□□ -1.88
RPN9YDR427W RSN1Q03516 953 aa3.31□□□□□ -1.88
RPN9YDR427W HER2Q03557 464 aa3.31□□□□□ -1.88
RPN9YDR427W SPC19Q03954 165 aa3.31□□□□□ -1.88
RPN9YDR427W PPM1Q04081 328 aa3.31□□□□□ -1.88
RPN9YDR427W SOR2Q07786 357 aa3.31□□□□□ -1.88
RPN9YDR427W SLY1P22213 666 aa3.3□□□□□ -1.88
RPN9YDR427W RPC53P25441 422 aa3.3□□□□□ -1.88
RPN9YDR427W CDC60P26637 1090 aaKnown RBP3.3□□□□□ -1.88
RPN9YDR427W YEL045CP32616 141 aa3.3□□□□□ -1.88
RPN9YDR427W APE3P37302 537 aaKnown RBP3.3□□□□□ -1.88
RPN9YDR427W SWD3P38123 315 aa3.3□□□□□ -1.88
RPN9YDR427W RRT2P38332 387 aa3.3□□□□□ -1.88
RPN9YDR427W MTC6P38849 526 aa3.3□□□□□ -1.88
RPN9YDR427W PTH1P38876 190 aaKnown RBP3.3□□□□□ -1.88
RPN9YDR427W PRE5P40302 234 aaKnown RBP3.3□□□□□ -1.88
RPN9YDR427W SSU1P41930 458 aa3.3□□□□□ -1.88
RPN9YDR427W HRI1Q05905 244 aaKnown RBP3.3□□□□□ -1.88
RPN9YDR427W REX4Q08237 289 aa3.3□□□□□ -1.88
RPN9YDR427W RRG7Q08774 242 aaPredicted RBP3.3□□□□□ -1.88
RPN9YDR427W HRT3Q12347 344 aa3.3□□□□□ -1.88
RPN9YDR427W CLN3P13365 580 aa3.29□□□□□ -1.88
RPN9YDR427W SPO12P17123 173 aa3.29□□□□□ -1.88
RPN9YDR427W KKQ8P36004 724 aa3.29□□□□□ -1.88
RPN9YDR427W NCA3P46955 337 aa3.29□□□□□ -1.88
RPN9YDR427W PHO86P46956 311 aa3.29□□□□□ -1.88
RPN9YDR427W RPT4P53549 437 aaKnown RBP3.29□□□□□ -1.88
RPN9YDR427W GPI15P53961 229 aa3.29□□□□□ -1.88
RPN9YDR427W BET5Q03630 159 aa3.29□□□□□ -1.88
RPN9YDR427W SNX3Q08826 162 aaKnown RBP3.29□□□□□ -1.88
RPN9YDR427W BUG1Q12191 341 aa3.29□□□□□ -1.88
RPN9YDR427W AFI1Q99222 893 aa3.29□□□□□ -1.88
RPN9YDR427W ADH2P00331 348 aaKnown RBP3.28□□□□□ -1.88
RPN9YDR427W KAR9P32526 644 aa3.28□□□□□ -1.88
RPN9YDR427W MSG5P38590 489 aa3.28□□□□□ -1.88
RPN9YDR427W PCF11P39081 626 aaPredicted RBP3.28□□□□□ -1.88
RPN9YDR427W PAN6P40459 309 aa3.28□□□□□ -1.88
RPN9YDR427W TOM22P49334 152 aa3.28□□□□□ -1.88
RPN9YDR427W MDG1P53885 366 aa3.28□□□□□ -1.88
RPN9YDR427W ACL4Q03771 387 aa3.28□□□□□ -1.88
RPN9YDR427W MMR1Q06324 491 aa3.28□□□□□ -1.88
RPN9YDR427W FDH1Q08911 376 aa3.28□□□□□ -1.88
RPN9YDR427W CYC3P06182 269 aa3.27□□□□□ -1.89
RPN9YDR427W NFT1P0CE68 1218 aa3.27□□□□□ -1.89
RPN9YDR427W RPS8AP0CX39 200 aaKnown RBP3.27□□□□□ -1.89
RPN9YDR427W RPS8BP0CX40 200 aaKnown RBP3.27□□□□□ -1.89
RPN9YDR427W SRV2P17555 526 aaKnown RBP3.27□□□□□ -1.89
RPN9YDR427W URA4P20051 364 aa3.27□□□□□ -1.89
RPN9YDR427W RAD57P25301 460 aa3.27□□□□□ -1.89
RPN9YDR427W ERV1P27882 189 aa3.27□□□□□ -1.89
RPN9YDR427W MPE1P35728 441 aaKnown RBP3.27□□□□□ -1.89
RPN9YDR427W SDT1P53078 280 aa3.27□□□□□ -1.89
RPN9YDR427W GIP3Q03016 1276 aa3.27□□□□□ -1.89
RPN9YDR427W ERB1Q04660 807 aaKnown RBP3.27□□□□□ -1.89
RPN9YDR427W PAL1Q05518 499 aaKnown RBP3.27□□□□□ -1.89
RPN9YDR427W YLR345WQ06137 509 aa3.27□□□□□ -1.89
RPN9YDR427W DIS3Q08162 1001 aaKnown RBP3.27□□□□□ -1.89
RPN9YDR427W SRL2Q12020 392 aa3.27□□□□□ -1.89
RPN9YDR427W COX3P00420 269 aa3.26□□□□□ -1.89
RPN9YDR427W TRP1P00912 224 aa3.26□□□□□ -1.89
RPN9YDR427W PET123P17558 318 aa3.26□□□□□ -1.89
RPN9YDR427W CLN1P20437 546 aa3.26□□□□□ -1.89
RPN9YDR427W DAL2P25335 343 aa3.26□□□□□ -1.89
RPN9YDR427W BRF1P29056 596 aa3.26□□□□□ -1.89
RPN9YDR427W SPR1P32603 445 aa3.26□□□□□ -1.89
RPN9YDR427W MUD1P32605 298 aaKnown RBP3.26□□□□□ -1.89
RPN9YDR427W RRN10P38204 145 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 58.8 ms