RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTG3	YBL103C	IRC25	Q07951	179 aa		3.55	□□□□□ -1.84
RTG3	YBL103C	SGT1	Q08446	395 aa		3.55	□□□□□ -1.84
RTG3	YBL103C	YRM1	Q12340	786 aa		3.55	□□□□□ -1.84
RTG3	YBL103C	ILV5	P06168	395 aa	Known RBP	3.54	□□□□□ -1.84
RTG3	YBL103C	CSE2	P33308	149 aa		3.54	□□□□□ -1.84
RTG3	YBL103C	MRP21	P38175	177 aa		3.54	□□□□□ -1.84
RTG3	YBL103C	OTU2	P38747	307 aa	Known RBP	3.54	□□□□□ -1.84
RTG3	YBL103C	BET5	Q03630	159 aa		3.54	□□□□□ -1.84
RTG3	YBL103C	RMD5	Q12508	421 aa		3.54	□□□□□ -1.84
RTG3	YBL103C	RFC3	P38629	340 aa		3.54	□□□□□ -1.84
RTG3	YBL103C	YJR011C	P47086	261 aa	Predicted RBP	3.54	□□□□□ -1.84
RTG3	YBL103C	AZR1	P50080	613 aa		3.54	□□□□□ -1.84
RTG3	YBL103C	REX4	Q08237	289 aa		3.54	□□□□□ -1.84
RTG3	YBL103C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.53	□□□□□ -1.84	not detected
RTG3	YBL103C	SIN4	P32259	974 aa		3.53	□□□□□ -1.84
RTG3	YBL103C	NUP2	P32499	720 aa		3.53	□□□□□ -1.84
RTG3	YBL103C	UTP9	P38882	575 aa	Known RBP	3.53	□□□□□ -1.84
RTG3	YBL103C	PHB2	P50085	310 aa		3.53	□□□□□ -1.84
RTG3	YBL103C	MNP1	P53163	194 aa	Predicted RBP	3.53	□□□□□ -1.84
RTG3	YBL103C	VTA1	Q06263	330 aa		3.53	□□□□□ -1.84
RTG3	YBL103C	RRI2	Q12348	645 aa		3.53	□□□□□ -1.84
RTG3	YBL103C	AHC1	Q12433	566 aa		3.53	□□□□□ -1.84
RTG3	YBL103C	MRP7	P12687	371 aa		3.52	□□□□□ -1.85
RTG3	YBL103C	CKA1	P15790	372 aa		3.52	□□□□□ -1.85
RTG3	YBL103C	ROX1	P25042	368 aa		3.52	□□□□□ -1.85
RTG3	YBL103C	ARA1	P38115	344 aa		3.52	□□□□□ -1.85
RTG3	YBL103C	RPS0B	P46654	252 aa	Known RBP	3.52	□□□□□ -1.85
RTG3	YBL103C	RPA49	Q01080	415 aa	Predicted RBP	3.52	□□□□□ -1.85
RTG3	YBL103C	MDM30	Q05930	598 aa		3.52	□□□□□ -1.85
RTG3	YBL103C	CUE5	Q08412	411 aa	Known RBP	3.52	□□□□□ -1.85
RTG3	YBL103C	RAD57	P25301	460 aa		3.51	□□□□□ -1.85
RTG3	YBL103C	CTR86	P25355	563 aa		3.51	□□□□□ -1.85
RTG3	YBL103C	NPL6	P32832	435 aa		3.51	□□□□□ -1.85
RTG3	YBL103C	AIM10	P39965	576 aa	Known RBP	3.51	□□□□□ -1.85
RTG3	YBL103C	UTP18	P40362	594 aa	Predicted RBP	3.51	□□□□□ -1.85
RTG3	YBL103C	GAB1	P41733	394 aa		3.51	□□□□□ -1.85
RTG3	YBL103C	IRC6	P43615	237 aa		3.51	□□□□□ -1.85
RTG3	YBL103C	HCS1	P34243	683 aa		3.5	□□□□□ -1.85
RTG3	YBL103C	DLD2	P46681	530 aa	Known RBP	3.5	□□□□□ -1.85
RTG3	YBL103C	RHO5	P53879	331 aa	Known RBP	3.5	□□□□□ -1.85
RTG3	YBL103C	SKI7	Q08491	747 aa	Predicted RBP	3.5	□□□□□ -1.85
RTG3	YBL103C	YOL159C-A	Q3E769	90 aa		3.5	□□□□□ -1.85
RTG3	YBL103C	RHB1	P25378	209 aa		3.49	□□□□□ -1.85
RTG3	YBL103C	JLP2	P40206	208 aa		3.49	□□□□□ -1.85
RTG3	YBL103C	YJR085C	P47131	105 aa	Known RBP	3.49	□□□□□ -1.85
RTG3	YBL103C	FMS1	P50264	508 aa		3.49	□□□□□ -1.85
RTG3	YBL103C	SPO12	P17123	173 aa		3.48	□□□□□ -1.85
RTG3	YBL103C	SPO7	P18410	259 aa		3.48	□□□□□ -1.85
RTG3	YBL103C	BEM1	P29366	551 aa		3.48	□□□□□ -1.85
RTG3	YBL103C	RML2	P32611	393 aa		3.48	□□□□□ -1.85
RTG3	YBL103C	SAS3	P34218	831 aa		3.48	□□□□□ -1.85
RTG3	YBL103C	MDE1	P47095	244 aa		3.48	□□□□□ -1.85
RTG3	YBL103C	MRPL19	P53875	158 aa		3.48	□□□□□ -1.85
RTG3	YBL103C	BCH1	Q05029	724 aa		3.48	□□□□□ -1.85
RTG3	YBL103C	NAM2	P11325	894 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	KRE2	P27809	442 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	SOR1	P35497	357 aa	Known RBP	3.47	□□□□□ -1.85
RTG3	YBL103C	NUP116	Q02630	1113 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	SOR2	Q07786	357 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	IZH2	Q12442	317 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	CLN1	P20437	546 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	PCF11	P39081	626 aa	Predicted RBP	3.47	□□□□□ -1.85
RTG3	YBL103C	GPI15	P53961	229 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	ADA2	Q02336	434 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	OAZ1	Q02803	292 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	PLP2	Q12017	286 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	VAM3	Q12241	283 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	RTN2	Q12443	393 aa		3.47	□□□□□ -1.85
RTG3	YBL103C	SMY1	P32364	656 aa	Known RBP	3.46	□□□□□ -1.86
RTG3	YBL103C	MID2	P36027	376 aa		3.46	□□□□□ -1.86
RTG3	YBL103C	APE3	P37302	537 aa	Known RBP	3.46	□□□□□ -1.86
RTG3	YBL103C	MIG3	P39943	394 aa		3.46	□□□□□ -1.86
RTG3	YBL103C	SUB1	P54000	292 aa	Known RBP	3.46	□□□□□ -1.86
RTG3	YBL103C	RRP45	Q05636	305 aa	Known RBP	3.46	□□□□□ -1.86
RTG3	YBL103C	GEX1	P25596	615 aa		3.45	□□□□□ -1.86
RTG3	YBL103C	HIR2	P32480	875 aa		3.45	□□□□□ -1.86
RTG3	YBL103C	NDE1	P40215	560 aa		3.45	□□□□□ -1.86
RTG3	YBL103C	GIP3	Q03016	1276 aa		3.45	□□□□□ -1.86
RTG3	YBL103C	HSP42	Q12329	375 aa		3.45	□□□□□ -1.86
RTG3	YBL103C	SFH5	P47008	294 aa		3.44	□□□□□ -1.86
RTG3	YBL103C	MTQ1	P53944	314 aa		3.44	□□□□□ -1.86
RTG3	YBL103C	RNY1	Q02933	434 aa	Known RBP	3.44	□□□□□ -1.86
RTG3	YBL103C	RKM1	Q08961	583 aa	Predicted RBP	3.44	□□□□□ -1.86
RTG3	YBL103C	SWE1	P32944	819 aa		3.43	□□□□□ -1.86
RTG3	YBL103C	YAL037W	P39728	267 aa		3.43	□□□□□ -1.86
RTG3	YBL103C	COS5	P47187	383 aa		3.43	□□□□□ -1.86
RTG3	YBL103C	TAF12	Q03761	539 aa		3.43	□□□□□ -1.86
RTG3	YBL103C	TAF11	Q04226	346 aa		3.43	□□□□□ -1.86
RTG3	YBL103C	COS7	Q07788	383 aa		3.43	□□□□□ -1.86
RTG3	YBL103C	SRL2	Q12020	392 aa		3.43	□□□□□ -1.86
RTG3	YBL103C	RED1	P14291	827 aa		3.42	□□□□□ -1.86
RTG3	YBL103C	CLB3	P24870	427 aa		3.42	□□□□□ -1.86
RTG3	YBL103C	ERG3	P32353	365 aa		3.42	□□□□□ -1.86
RTG3	YBL103C	NTC20	P38302	140 aa	Predicted RBP	3.42	□□□□□ -1.86
RTG3	YBL103C	SBE22	P38814	852 aa		3.42	□□□□□ -1.86
RTG3	YBL103C	YIL029C	P40538	142 aa		3.42	□□□□□ -1.86
RTG3	YBL103C	PHO86	P46956	311 aa		3.42	□□□□□ -1.86
RTG3	YBL103C	VPS72	Q03388	795 aa		3.42	□□□□□ -1.86
RTG3	YBL103C	ARX1	Q03862	593 aa	Known RBP	3.42	□□□□□ -1.86
RTG3	YBL103C	SCEI	P03882	235 aa		3.41	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 103.6 ms