RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 MBOAT7Q96N66 472 aa28.55■■■□□ 2.16
CPNE1-212ENST00000430570 H3BQV1 296 aa28.54■■■□□ 2.16
CPNE1-212ENST00000430570 WNT7AO00755 349 aa28.54■■■□□ 2.16
CPNE1-212ENST00000430570 MYL3P08590 195 aa28.54■■■□□ 2.16
CPNE1-212ENST00000430570 MOXD1Q6UVY6 613 aa28.54■■■□□ 2.16
CPNE1-212ENST00000430570 PPTC7Q8NI37 304 aa28.54■■■□□ 2.16
CPNE1-212ENST00000430570 A0A1W2PQ45 241 aaPredicted RBP28.53■■■□□ 2.16
CPNE1-212ENST00000430570 A0A1W2PQY0 241 aa28.53■■■□□ 2.16
CPNE1-212ENST00000430570 ZEB2O60315 1214 aa28.53■■■□□ 2.16
CPNE1-212ENST00000430570 U2AF2P26368 475 aaKnown RBP eCLIP28.53■■■□□ 2.163e-26■□□□□ 9.9
CPNE1-212ENST00000430570 SETQ01105 290 aaPredicted RBP28.53■■■□□ 2.16
CPNE1-212ENST00000430570 SP4Q02446 784 aa28.53■■■□□ 2.16
CPNE1-212ENST00000430570 Q4G0T1 1027 aa28.53■■■□□ 2.16
CPNE1-212ENST00000430570 GIMAP8Q8ND71 665 aaPredicted RBP28.53■■■□□ 2.16
CPNE1-212ENST00000430570 MSH4O15457 936 aa28.52■■■□□ 2.16
CPNE1-212ENST00000430570 SLC37A4O43826 429 aa28.52■■■□□ 2.16
CPNE1-212ENST00000430570 SPRYD3Q8NCJ5 442 aa28.52■■■□□ 2.16
CPNE1-212ENST00000430570 GJA10Q969M2 543 aa28.52■■■□□ 2.16
CPNE1-212ENST00000430570 DDX25Q9UHL0 483 aaKnown RBP28.52■■■□□ 2.16
CPNE1-212ENST00000430570 NFASCO94856 1347 aa28.52■■■□□ 2.16
CPNE1-212ENST00000430570 DHX15O43143 795 aaKnown RBP28.51■■■□□ 2.15
CPNE1-212ENST00000430570 CCNT1O60563 726 aaKnown RBP28.51■■■□□ 2.15
CPNE1-212ENST00000430570 ATN1P54259 1190 aaPredicted RBP28.51■■■□□ 2.15
CPNE1-212ENST00000430570 PURAQ00577 322 aaKnown RBP28.51■■■□□ 2.15
CPNE1-212ENST00000430570 GNL2Q13823 731 aaKnown RBP28.51■■■□□ 2.15
CPNE1-212ENST00000430570 BRDTQ58F21 947 aaPredicted RBP28.51■■■□□ 2.15
CPNE1-212ENST00000430570 MCTP1Q6DN14 999 aa28.51■■■□□ 2.15
CPNE1-212ENST00000430570 PPP4R3AQ6IN85 833 aa28.51■■■□□ 2.15
CPNE1-212ENST00000430570 NOSTRINQ8IVI9 506 aa28.51■■■□□ 2.15
CPNE1-212ENST00000430570 GPR20Q99678 358 aa28.51■■■□□ 2.15
CPNE1-212ENST00000430570 ZNF577Q9BSK1 485 aa28.51■■■□□ 2.15
CPNE1-212ENST00000430570 POLR3EQ9NVU0 708 aa28.51■■■□□ 2.15
CPNE1-212ENST00000430570 DDX39AO00148 427 aaKnown RBP28.5■■■□□ 2.15
CPNE1-212ENST00000430570 IPO5O00410 1097 aaKnown RBP28.5■■■□□ 2.15
CPNE1-212ENST00000430570 HOXD8P13378 290 aaPredicted RBP28.5■■■□□ 2.15
CPNE1-212ENST00000430570 SLC39A5Q6ZMH5 540 aa28.5■■■□□ 2.15
CPNE1-212ENST00000430570 SDF4Q9BRK5 362 aa28.5■■■□□ 2.15
CPNE1-212ENST00000430570 ATP2B1P20020 1258 aa28.49■■■□□ 2.15
CPNE1-212ENST00000430570 SYT1P21579 422 aa28.49■■■□□ 2.15
CPNE1-212ENST00000430570 PSMC6P62333 389 aa28.49■■■□□ 2.15
CPNE1-212ENST00000430570 DGKDQ16760 1214 aa28.49■■■□□ 2.15
CPNE1-212ENST00000430570 GLT1D1Q96MS3 346 aa28.49■■■□□ 2.15
CPNE1-212ENST00000430570 JPH1Q9HDC5 661 aaPredicted RBP28.49■■■□□ 2.15
CPNE1-212ENST00000430570 STARD7Q9NQZ5 370 aa28.49■■■□□ 2.15
CPNE1-212ENST00000430570 GSTTP1A0A1W2PQM5 241 aa28.48■■■□□ 2.15
CPNE1-212ENST00000430570 NOP56O00567 594 aaKnown RBP28.48■■■□□ 2.15
CPNE1-212ENST00000430570 PPFIA4O75335 1185 aa28.48■■■□□ 2.15
CPNE1-212ENST00000430570 HSP90AA1P07900 732 aaKnown RBP28.48■■■□□ 2.15
CPNE1-212ENST00000430570 GCFC2P16383 781 aaKnown RBP28.48■■■□□ 2.15
CPNE1-212ENST00000430570 LRRC26Q2I0M4 334 aa28.48■■■□□ 2.15
CPNE1-212ENST00000430570 SLC5A5Q92911 643 aa28.48■■■□□ 2.15
CPNE1-212ENST00000430570 VTI1AQ96AJ9 217 aa28.48■■■□□ 2.15
CPNE1-212ENST00000430570 MTG1Q9BT17 334 aaPredicted RBP28.48■■■□□ 2.15
CPNE1-212ENST00000430570 SLC9A2Q9UBY0 812 aa28.48■■■□□ 2.15
CPNE1-212ENST00000430570 KPNA6O60684 536 aa28.47■■■□□ 2.15
CPNE1-212ENST00000430570 CABYRO75952 493 aa28.47■■■□□ 2.15
CPNE1-212ENST00000430570 PDCP20941 246 aa28.47■■■□□ 2.15
CPNE1-212ENST00000430570 ETNPPLQ8TBG4 499 aa28.47■■■□□ 2.15
CPNE1-212ENST00000430570 PPP1R13LQ8WUF5 828 aa28.47■■■□□ 2.15
CPNE1-212ENST00000430570 KAT2BQ92831 832 aa28.47■■■□□ 2.15
CPNE1-212ENST00000430570 NAP1L4Q99733 375 aaKnown RBP28.47■■■□□ 2.15
CPNE1-212ENST00000430570 GRIN2DO15399 1336 aa28.47■■■□□ 2.15
CPNE1-212ENST00000430570 ELP1O95163 1332 aa28.47■■■□□ 2.15
CPNE1-212ENST00000430570 VPS37CA5D8V6 355 aaPredicted RBP28.46■■■□□ 2.15
CPNE1-212ENST00000430570 CCNE2O96020 404 aa28.46■■■□□ 2.15
CPNE1-212ENST00000430570 ZNF286BP0CG31 522 aa28.46■■■□□ 2.15
CPNE1-212ENST00000430570 MKI67P46013 3256 aaKnown RBP28.46■■■□□ 2.15
CPNE1-212ENST00000430570 POTEDQ86YR6 584 aa28.46■■■□□ 2.15
CPNE1-212ENST00000430570 SEPT1Q8WYJ6 367 aa28.46■■■□□ 2.15
CPNE1-212ENST00000430570 KCNMB3Q9NPA1 279 aa28.46■■■□□ 2.15
CPNE1-212ENST00000430570 TBC1D22BQ9NU19 505 aa28.46■■■□□ 2.15
CPNE1-212ENST00000430570 TOB1P50616 345 aaPredicted RBP28.45■■■□□ 2.15
CPNE1-212ENST00000430570 UTP14CQ5TAP6 766 aaKnown RBP28.45■■■□□ 2.15
CPNE1-212ENST00000430570 C16orf70Q9BSU1 422 aa28.45■■■□□ 2.15
CPNE1-212ENST00000430570 ALPK3Q96L96 1907 aa28.45■■■□□ 2.15
CPNE1-212ENST00000430570 LGALS2P05162 132 aa28.44■■■□□ 2.14
CPNE1-212ENST00000430570 TCF7P36402 384 aaPredicted RBP28.44■■■□□ 2.14
CPNE1-212ENST00000430570 ACTR2P61160 394 aa28.44■■■□□ 2.14
CPNE1-212ENST00000430570 NBR1Q14596 966 aa28.44■■■□□ 2.14
CPNE1-212ENST00000430570 SNX17Q15036 470 aa28.44■■■□□ 2.14
CPNE1-212ENST00000430570 ZNF174Q15697 407 aa28.44■■■□□ 2.14
CPNE1-212ENST00000430570 HAS1Q92839 578 aa28.44■■■□□ 2.14
CPNE1-212ENST00000430570 MTMR6Q9Y217 621 aa28.44■■■□□ 2.14
CPNE1-212ENST00000430570 PSMD10O75832 226 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 ITGA7Q13683 1181 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 LRCH2Q5VUJ6 765 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 FERMT3Q86UX7 667 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 TRIM50Q86XT4 487 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 RIT2Q99578 217 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 HTATIP2Q9BUP3 242 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 SCN10AQ9Y5Y9 1956 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 A0A0U1RQG5 324 aaPredicted RBP28.43■■■□□ 2.14
CPNE1-212ENST00000430570 ARVCFO00192 962 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 ATG7O95352 703 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 MCM7P33993 719 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 CDK7P50613 346 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 RTP1P59025 263 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 CHMP4BP1P59074 171 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 NBPF20Q3BBV1 942 aa28.43■■■□□ 2.14
CPNE1-212ENST00000430570 TRIM60Q495X7 471 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms