RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PPP1R1BQ9UD71 204 aaPredicted RBP6.57□□□□□ -1.36
CLK1-203ENST00000409769 INVSQ9Y283 1065 aa6.57□□□□□ -1.36
CLK1-203ENST00000409769 WDR62O43379 1518 aa6.56□□□□□ -1.36
CLK1-203ENST00000409769 MRC2Q9UBG0 1479 aa6.56□□□□□ -1.36
CLK1-203ENST00000409769 HGSO14964 777 aaPredicted RBP6.56□□□□□ -1.36
CLK1-203ENST00000409769 PDPK1O15530 556 aa6.56□□□□□ -1.36
CLK1-203ENST00000409769 MAFKO60675 156 aa6.56□□□□□ -1.36
CLK1-203ENST00000409769 SNRPB2P08579 225 aaKnown RBP6.56□□□□□ -1.36
CLK1-203ENST00000409769 FPR2P25090 351 aa6.56□□□□□ -1.36
CLK1-203ENST00000409769 MCTP2Q6DN12 878 aa6.56□□□□□ -1.36
CLK1-203ENST00000409769 GLB1LQ6UWU2 654 aa6.56□□□□□ -1.36
CLK1-203ENST00000409769 FAM26EQ8N5C1 309 aa6.56□□□□□ -1.36
CLK1-203ENST00000409769 CHST13Q8NET6 341 aa6.56□□□□□ -1.36
CLK1-203ENST00000409769 BTN2A2Q8WVV5 523 aa6.56□□□□□ -1.36
CLK1-203ENST00000409769 ZNF536O15090 1300 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 A0A1W2PQU0 124 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 ZNF28P17035 718 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 LTBRP36941 435 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 BCL6P41182 706 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 CYP4F3Q08477 520 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 LSAMPQ13449 338 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 RASA3Q14644 834 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 CR1LQ2VPA4 569 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 EMC4Q5J8M3 183 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 PRAMEF18Q5VWM3 479 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 PHOSPHO1Q8TCT1 267 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 TOE1Q96GM8 510 aaKnown RBP6.55□□□□□ -1.36
CLK1-203ENST00000409769 CLIC6Q96NY7 704 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 DTLQ9NZJ0 730 aa6.55□□□□□ -1.36
CLK1-203ENST00000409769 DDX3XO00571 662 aaKnown RBP eCLIP6.54□□□□□ -1.36
CLK1-203ENST00000409769 LAMTOR5O43504 91 aa6.54□□□□□ -1.36
CLK1-203ENST00000409769 ZNF20P17024 532 aa6.54□□□□□ -1.36
CLK1-203ENST00000409769 TNFRSF1AP19438 455 aa6.54□□□□□ -1.36
CLK1-203ENST00000409769 ECI1P42126 302 aa6.54□□□□□ -1.36
CLK1-203ENST00000409769 NLRP10Q86W26 655 aa6.54□□□□□ -1.36
CLK1-203ENST00000409769 CCDC103Q8IW40 242 aa6.54□□□□□ -1.36
CLK1-203ENST00000409769 PPIL6Q8IXY8 311 aa6.54□□□□□ -1.36
CLK1-203ENST00000409769 LRRC47Q8N1G4 583 aaKnown RBP6.54□□□□□ -1.36
CLK1-203ENST00000409769 DVL3Q92997 716 aaPredicted RBP6.54□□□□□ -1.36
CLK1-203ENST00000409769 TMEM209Q96SK2 561 aa6.54□□□□□ -1.36
CLK1-203ENST00000409769 EPB41L1Q9H4G0 881 aa6.54□□□□□ -1.36
CLK1-203ENST00000409769 ERCC6Q03468 1493 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 TBX1O43435 398 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 CYP1A1P04798 512 aaPredicted RBP6.53□□□□□ -1.36
CLK1-203ENST00000409769 GFRA1P56159 465 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 PPP2R2AP63151 447 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 ADAM9Q13443 819 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 HSP90AA2PQ14568 343 aaPredicted RBP6.53□□□□□ -1.36
CLK1-203ENST00000409769 LONRF2Q1L5Z9 754 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 STEAP3Q658P3 488 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 CYP4F22Q6NT55 531 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 KREMEN2Q8NCW0 462 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 RCBTB1Q8NDN9 531 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 C8orf49Q96NF6 230 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 DEPDC7Q96QD5 511 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 SSBP3Q9BWW4 388 aaPredicted RBP6.53□□□□□ -1.36
CLK1-203ENST00000409769 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 L2HGDHQ9H9P8 463 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 HSPBP1Q9NZL4 362 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 PCDHB4Q9Y5E5 795 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 WDR97A6NE52 1622 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 POLA1P09884 1462 aaPredicted RBP6.53□□□□□ -1.36
CLK1-203ENST00000409769 FGD5Q6ZNL6 1462 aa6.53□□□□□ -1.36
CLK1-203ENST00000409769 TADA3O75528 432 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 DGKIO75912 1065 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 FGFR1P11362 822 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 STAT5AP42229 794 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 KCNJ6P48051 423 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 MAP4K2Q12851 820 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 JMYQ8N9B5 988 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 C1orf159Q96HA4 380 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 CHAMP1Q96JM3 812 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 CDK5RAP1Q96SZ6 601 aaKnown RBP6.52□□□□□ -1.37
CLK1-203ENST00000409769 SPATA9Q9BWV2 254 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 LGR4Q9BXB1 951 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 TMEM168Q9H0V1 697 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 OSBPL2Q9H1P3 480 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 SNTG2Q9NY99 539 aa6.52□□□□□ -1.37
CLK1-203ENST00000409769 TMEFF2Q9UIK5 374 aaPredicted RBP6.52□□□□□ -1.37
CLK1-203ENST00000409769 TCRBV5S2A0A599 114 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 KRIT1O00522 736 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 MATN3O15232 486 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 ZXDAP98168 799 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 SLC35F1Q5T1Q4 408 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 STK32CQ86UX6 486 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 TRIM48Q8IWZ4 208 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 YTHDC1Q96MU7 727 aaKnown RBP6.51□□□□□ -1.37
CLK1-203ENST00000409769 DNAJC2Q99543 621 aaKnown RBP6.51□□□□□ -1.37
CLK1-203ENST00000409769 SYT3Q9BQG1 590 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 AARSD1Q9BTE6 412 aaKnown RBP6.51□□□□□ -1.37
CLK1-203ENST00000409769 SMOC1Q9H4F8 434 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 ARHGEF4Q9NR80 690 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 PCDHA2Q9Y5H9 948 aa6.51□□□□□ -1.37
CLK1-203ENST00000409769 CUX2O14529 1486 aa6.5□□□□□ -1.37
CLK1-203ENST00000409769 FAM221BA6H8Z2 402 aa6.5□□□□□ -1.37
CLK1-203ENST00000409769 ADCY3O60266 1144 aa6.5□□□□□ -1.37
CLK1-203ENST00000409769 IL13P35225 146 aa6.5□□□□□ -1.37
CLK1-203ENST00000409769 NFE2L2Q16236 605 aa6.5□□□□□ -1.37
CLK1-203ENST00000409769 MTERF2Q49AM1 385 aa6.5□□□□□ -1.37
CLK1-203ENST00000409769 ZC3H12BQ5HYM0 836 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms