RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gys1Q9Z1E4 738 aaKnown RBP10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Itsn2Q9Z0R6 1659 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ncapd2Q8K2Z4 1392 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Lrrc10bG3XA50 292 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 AoahO35298 574 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Sema6bO54951 886 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Tulp2P46686 562 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 CtshP49935 333 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Fam198aQ3UY90 562 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Krt35Q497I4 455 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ddx17Q501J6 650 aaKnown RBP10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Tbc1d9bQ5SVR0 1263 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Sh3gl3Q62421 347 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 VclQ64727 1066 aaKnown RBP10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 UnkQ8BL48 810 aaKnown RBP10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Yod1Q8CB27 343 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ppp1r42Q8R1Z4 357 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 SncaipQ99ME3 962 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Rbm18Q9CR83 190 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Nubp1Q9R060 320 aa10.05□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Fam171a2A2A699 822 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ppp1r36D3Z0R2 411 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Atp6ap1lD3Z5W0 336 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gm8922F6XVS9 199 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gm6460F6YJZ8 199 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gm8871F7AXK2 190 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Sap30bpQ02614 308 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ptcd3Q14C51 685 aaKnown RBP10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Nsrp1Q5NCR9 542 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Irak1Q62406 710 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Eif4bQ8BGD9 611 aaKnown RBP10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Pik3cbQ8BTI9 1064 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Dnajc22Q8CHS2 339 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Mtif2Q91YJ5 727 aaKnown RBP10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Tor1aip1Q921T2 595 aaKnown RBP10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Lmbr1lQ9D1E5 489 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Paip2Q9D6V8 124 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Tmco5aQ9D9D5 303 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ybx3Q9JKB3 361 aaKnown RBP10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Kif20bQ80WE4 1774 aaKnown RBP10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Pik3c2bE9QAN8 1632 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gm8212F6ZMY5 213 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 DldO08749 509 aaKnown RBP10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Aqp8P56404 261 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 DhpsQ3TXU5 369 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 PsapQ61207 557 aaKnown RBP10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Pcp4l1Q6W8Q3 68 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Stk32aQ8BGW6 398 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Lsm14bQ8CGC4 385 aaKnown RBP10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Polr3dQ91WD1 398 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 4930548H24RikQ9D496 437 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Fmnl1Q9JL26 1094 aa10.04□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Usp32F8VPZ3 1604 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Cep152A2AUM9 1736 aaKnown RBP10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Sipa1l2Q80TE4 1722 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gm36028A0A0U1RPM1 299 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Zfp626A0A0U1RQ84 676 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Veph1A1A535 833 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Ankle1A8VU90 534 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gbp11A9YVJ5 442 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Terf2O35144 541 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Grk6O70293 576 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Casp14O89094 257 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Rps6ka3P18654 740 aaKnown RBP10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Sesn1P58006 492 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Oog2Q7TPX8 476 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Sgsm2Q80U12 1005 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Hpcal4Q8BGZ1 191 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gbp9Q8BTS3 619 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Slc24a4Q8CGQ8 622 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Mtss1Q8R1S4 759 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Cgref1Q8R1U2 281 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Hps3Q91VB4 1002 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Hars2Q99KK9 505 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Luc7lQ9CYI4 371 aaKnown RBP10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Nphp1Q9QY53 687 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 PapolbQ9WVP6 641 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Cdk5rap2Q8K389 1822 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Lrrc7Q80TE7 1490 aa10.03□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Pcsk6F6XJP7 959 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Rps2P25444 293 aaKnown RBP10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Gnat2P50149 354 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Kiaa1468Q148V7 1216 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Tbc1d9Q3UYK3 1264 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Rbm44Q3V089 1013 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 MycbpapQ5SUV2 932 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 CstbQ62426 98 aaKnown RBP10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 RadilQ69Z89 1099 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Kiaa1328Q6NZK5 612 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 IqcgQ80W32 419 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 SnupnQ80W37 358 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Lrrtm3Q8BZ81 582 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Fam155aQ8CCS2 467 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Vps50Q8CI71 964 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Casc3Q8K3W3 698 aaKnown RBP10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 NaxeQ8K4Z3 282 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Tubg2Q8VCK3 451 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Chchd4Q8VEA4 139 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Farp2Q91VS8 1065 aa10.02□□□□□ -0.8
Upf3b-201ENSMUST00000076265 Foxp3Q99JB6 429 aa10.02□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms