Protein–RNA interactions for Protein: Q8CGC4

Lsm14b, Protein LSM14 homolog B, mousemouse

Known RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm14bQ8CGC4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Lsm14bQ8CGC4 Gm25239-201ENSMUST00000174915 86 ntBASIC35.03■■■■□ 3.2
Lsm14bQ8CGC4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.58■■■■□ 3.13
Lsm14bQ8CGC4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Lsm14bQ8CGC4 Psd-208ENSMUST00000224556 2034 ntBASIC33.73■■■□□ 2.99
Lsm14bQ8CGC4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Lsm14bQ8CGC4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
Lsm14bQ8CGC4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Lsm14bQ8CGC4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Lsm14bQ8CGC4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.57■■■□□ 2.8
Lsm14bQ8CGC4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Lsm14bQ8CGC4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Lsm14bQ8CGC4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Lsm14bQ8CGC4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Lsm14bQ8CGC4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Lsm14bQ8CGC4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Lsm14bQ8CGC4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Lsm14bQ8CGC4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.61■■■□□ 2.65
Lsm14bQ8CGC4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Lsm14bQ8CGC4 Gm15042-201ENSMUST00000120212 883 ntBASIC31.38■■■□□ 2.61
Lsm14bQ8CGC4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Lsm14bQ8CGC4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Lsm14bQ8CGC4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Lsm14bQ8CGC4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
Lsm14bQ8CGC4 Gm24109-201ENSMUST00000175489 103 ntBASIC30.94■■■□□ 2.54
Lsm14bQ8CGC4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Lsm14bQ8CGC4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Lsm14bQ8CGC4 Gm15045-201ENSMUST00000117359 883 ntBASIC30.9■■■□□ 2.54
Lsm14bQ8CGC4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
Lsm14bQ8CGC4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.68■■■□□ 2.5
Lsm14bQ8CGC4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Lsm14bQ8CGC4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.56■■■□□ 2.48
Lsm14bQ8CGC4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
Lsm14bQ8CGC4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Lsm14bQ8CGC4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Lsm14bQ8CGC4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.49■■■□□ 2.47
Lsm14bQ8CGC4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Lsm14bQ8CGC4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Lsm14bQ8CGC4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.41■■■□□ 2.46
Lsm14bQ8CGC4 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.28■■■□□ 2.44
Lsm14bQ8CGC4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Lsm14bQ8CGC4 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.23■■■□□ 2.43
Lsm14bQ8CGC4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Lsm14bQ8CGC4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Lsm14bQ8CGC4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Lsm14bQ8CGC4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Lsm14bQ8CGC4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Lsm14bQ8CGC4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Lsm14bQ8CGC4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.93■■■□□ 2.38
Lsm14bQ8CGC4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Lsm14bQ8CGC4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Lsm14bQ8CGC4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Lsm14bQ8CGC4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Lsm14bQ8CGC4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
Lsm14bQ8CGC4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
Lsm14bQ8CGC4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Lsm14bQ8CGC4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Lsm14bQ8CGC4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Lsm14bQ8CGC4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Lsm14bQ8CGC4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
Lsm14bQ8CGC4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.46■■■□□ 2.31
Lsm14bQ8CGC4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Lsm14bQ8CGC4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Lsm14bQ8CGC4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Lsm14bQ8CGC4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Lsm14bQ8CGC4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.33■■■□□ 2.29
Lsm14bQ8CGC4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Lsm14bQ8CGC4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Lsm14bQ8CGC4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.14■■■□□ 2.26
Lsm14bQ8CGC4 Gm23366-201ENSMUST00000175022 89 ntBASIC29.13■■■□□ 2.25
Lsm14bQ8CGC4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Lsm14bQ8CGC4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Lsm14bQ8CGC4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Lsm14bQ8CGC4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Lsm14bQ8CGC4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
Lsm14bQ8CGC4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Lsm14bQ8CGC4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Lsm14bQ8CGC4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.96■■■□□ 2.23
Lsm14bQ8CGC4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Lsm14bQ8CGC4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Lsm14bQ8CGC4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Lsm14bQ8CGC4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Lsm14bQ8CGC4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.91■■■□□ 2.22
Lsm14bQ8CGC4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Lsm14bQ8CGC4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Lsm14bQ8CGC4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
Lsm14bQ8CGC4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Lsm14bQ8CGC4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Lsm14bQ8CGC4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.68■■■□□ 2.18
Lsm14bQ8CGC4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Lsm14bQ8CGC4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Lsm14bQ8CGC4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.64■■■□□ 2.18
Lsm14bQ8CGC4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
Lsm14bQ8CGC4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Lsm14bQ8CGC4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.56■■■□□ 2.16
Lsm14bQ8CGC4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Lsm14bQ8CGC4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Lsm14bQ8CGC4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Lsm14bQ8CGC4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Lsm14bQ8CGC4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms