Protein–RNA interactions for Protein: A1A535

Veph1, Ventricular zone-expressed PH domain-containing protein 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Veph1A1A535 Gm25239-201ENSMUST00000174915 86 ntBASIC41.2■■■■■ 4.19
Veph1A1A535 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
Veph1A1A535 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Veph1A1A535 Gm15042-201ENSMUST00000120212 883 ntBASIC36.03■■■■□ 3.36
Veph1A1A535 Gm24109-201ENSMUST00000175489 103 ntBASIC35.68■■■■□ 3.3
Veph1A1A535 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Veph1A1A535 Gm15045-201ENSMUST00000117359 883 ntBASIC35.16■■■■□ 3.22
Veph1A1A535 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
Veph1A1A535 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.77■■■■□ 3.16
Veph1A1A535 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
Veph1A1A535 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Veph1A1A535 Gm23366-201ENSMUST00000175022 89 ntBASIC34.46■■■■□ 3.11
Veph1A1A535 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Veph1A1A535 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.06■■■■□ 3.04
Veph1A1A535 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
Veph1A1A535 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Veph1A1A535 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.28■■■□□ 2.92
Veph1A1A535 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.26■■■□□ 2.92
Veph1A1A535 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33.22■■■□□ 2.91
Veph1A1A535 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.19■■■□□ 2.9
Veph1A1A535 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.05■■■□□ 2.88
Veph1A1A535 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Veph1A1A535 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.98■■■□□ 2.87
Veph1A1A535 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Veph1A1A535 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Veph1A1A535 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.76■■■□□ 2.84
Veph1A1A535 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Veph1A1A535 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Veph1A1A535 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Veph1A1A535 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Veph1A1A535 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.57■■■□□ 2.8
Veph1A1A535 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.51■■■□□ 2.79
Veph1A1A535 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
Veph1A1A535 Gm25238-201ENSMUST00000174914 89 ntBASIC32.48■■■□□ 2.79
Veph1A1A535 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Veph1A1A535 Psd-208ENSMUST00000224556 2034 ntBASIC32.27■■■□□ 2.76
Veph1A1A535 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Veph1A1A535 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.94■■■□□ 2.7
Veph1A1A535 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
Veph1A1A535 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Veph1A1A535 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.74■■■□□ 2.67
Veph1A1A535 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Veph1A1A535 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Veph1A1A535 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Veph1A1A535 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.54■■■□□ 2.64
Veph1A1A535 Gm27325-201ENSMUST00000175467 74 ntBASIC31.54■■■□□ 2.64
Veph1A1A535 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
Veph1A1A535 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Veph1A1A535 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Veph1A1A535 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.4■■■□□ 2.62
Veph1A1A535 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.39■■■□□ 2.61
Veph1A1A535 Gm25262-201ENSMUST00000174934 133 ntBASIC31.21■■■□□ 2.59
Veph1A1A535 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC31.11■■■□□ 2.57
Veph1A1A535 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Veph1A1A535 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.07■■■□□ 2.56
Veph1A1A535 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Veph1A1A535 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Veph1A1A535 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Veph1A1A535 Rab21-202ENSMUST00000218831 843 ntBASIC31.01■■■□□ 2.55
Veph1A1A535 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Veph1A1A535 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.93■■■□□ 2.54
Veph1A1A535 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Veph1A1A535 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Veph1A1A535 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.75■■■□□ 2.51
Veph1A1A535 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Veph1A1A535 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.69■■■□□ 2.5
Veph1A1A535 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.61■■■□□ 2.49
Veph1A1A535 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.61■■■□□ 2.49
Veph1A1A535 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Veph1A1A535 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Veph1A1A535 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.49
Veph1A1A535 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Veph1A1A535 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Veph1A1A535 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
Veph1A1A535 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Veph1A1A535 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
Veph1A1A535 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Veph1A1A535 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.49■■■□□ 2.47
Veph1A1A535 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Veph1A1A535 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Veph1A1A535 Gm26115-201ENSMUST00000175605 87 ntBASIC30.43■■■□□ 2.46
Veph1A1A535 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.43■■■□□ 2.46
Veph1A1A535 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Veph1A1A535 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Veph1A1A535 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Veph1A1A535 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Veph1A1A535 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Veph1A1A535 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Veph1A1A535 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Veph1A1A535 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Veph1A1A535 Gm8109-201ENSMUST00000194076 746 ntBASIC30.22■■■□□ 2.43
Veph1A1A535 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Veph1A1A535 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.21■■■□□ 2.43
Veph1A1A535 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.2■■■□□ 2.43
Veph1A1A535 CT025624.2-201ENSMUST00000223609 1909 ntBASIC30.18■■■□□ 2.42
Veph1A1A535 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.14■■■□□ 2.42
Veph1A1A535 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.08■■■□□ 2.41
Veph1A1A535 Gm42596-201ENSMUST00000196305 1958 ntBASIC30.07■■■□□ 2.4
Veph1A1A535 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Veph1A1A535 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms