Protein–RNA interactions for Protein: Q8R1S4

Mtss1, Metastasis suppressor protein 1, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtss1Q8R1S4 Gm25239-201ENSMUST00000174915 86 ntBASIC37.74■■■■□ 3.63
Mtss1Q8R1S4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
Mtss1Q8R1S4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Mtss1Q8R1S4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.56■■■■□ 3.12
Mtss1Q8R1S4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.52■■■■□ 3.12
Mtss1Q8R1S4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Mtss1Q8R1S4 Gm15042-201ENSMUST00000120212 883 ntBASIC33.65■■■□□ 2.98
Mtss1Q8R1S4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Mtss1Q8R1S4 Psd-208ENSMUST00000224556 2034 ntBASIC33.16■■■□□ 2.9
Mtss1Q8R1S4 Gm15045-201ENSMUST00000117359 883 ntBASIC32.99■■■□□ 2.87
Mtss1Q8R1S4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.62■■■□□ 2.81
Mtss1Q8R1S4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Mtss1Q8R1S4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.5■■■□□ 2.79
Mtss1Q8R1S4 Gm24109-201ENSMUST00000175489 103 ntBASIC32.39■■■□□ 2.78
Mtss1Q8R1S4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Mtss1Q8R1S4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Mtss1Q8R1S4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Mtss1Q8R1S4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Mtss1Q8R1S4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Mtss1Q8R1S4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Mtss1Q8R1S4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Mtss1Q8R1S4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Mtss1Q8R1S4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Mtss1Q8R1S4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.67■■■□□ 2.66
Mtss1Q8R1S4 Gm23366-201ENSMUST00000175022 89 ntBASIC31.66■■■□□ 2.66
Mtss1Q8R1S4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
Mtss1Q8R1S4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Mtss1Q8R1S4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Mtss1Q8R1S4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Mtss1Q8R1S4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Mtss1Q8R1S4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.35■■■□□ 2.61
Mtss1Q8R1S4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Mtss1Q8R1S4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Mtss1Q8R1S4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Mtss1Q8R1S4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Mtss1Q8R1S4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Mtss1Q8R1S4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
Mtss1Q8R1S4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.86■■■□□ 2.53
Mtss1Q8R1S4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.85■■■□□ 2.53
Mtss1Q8R1S4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Mtss1Q8R1S4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Mtss1Q8R1S4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Mtss1Q8R1S4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.55■■■□□ 2.48
Mtss1Q8R1S4 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.55■■■□□ 2.48
Mtss1Q8R1S4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Mtss1Q8R1S4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Mtss1Q8R1S4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Mtss1Q8R1S4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Mtss1Q8R1S4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Mtss1Q8R1S4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Mtss1Q8R1S4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Mtss1Q8R1S4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Mtss1Q8R1S4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Mtss1Q8R1S4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Mtss1Q8R1S4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Mtss1Q8R1S4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.87■■■□□ 2.37
Mtss1Q8R1S4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.84■■■□□ 2.37
Mtss1Q8R1S4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Mtss1Q8R1S4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Mtss1Q8R1S4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Mtss1Q8R1S4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.74■■■□□ 2.35
Mtss1Q8R1S4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Mtss1Q8R1S4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
Mtss1Q8R1S4 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.68■■■□□ 2.34
Mtss1Q8R1S4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Mtss1Q8R1S4 Gm27325-201ENSMUST00000175467 74 ntBASIC29.61■■■□□ 2.33
Mtss1Q8R1S4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.59■■■□□ 2.33
Mtss1Q8R1S4 Gm25238-201ENSMUST00000174914 89 ntBASIC29.55■■■□□ 2.32
Mtss1Q8R1S4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.54■■■□□ 2.32
Mtss1Q8R1S4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.53■■■□□ 2.32
Mtss1Q8R1S4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.45■■■□□ 2.3
Mtss1Q8R1S4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Mtss1Q8R1S4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Mtss1Q8R1S4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.33■■■□□ 2.29
Mtss1Q8R1S4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Mtss1Q8R1S4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Mtss1Q8R1S4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
Mtss1Q8R1S4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Mtss1Q8R1S4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Mtss1Q8R1S4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Mtss1Q8R1S4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Mtss1Q8R1S4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Mtss1Q8R1S4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Mtss1Q8R1S4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Mtss1Q8R1S4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Mtss1Q8R1S4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
Mtss1Q8R1S4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Mtss1Q8R1S4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Mtss1Q8R1S4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Mtss1Q8R1S4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Mtss1Q8R1S4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29■■■□□ 2.23
Mtss1Q8R1S4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Mtss1Q8R1S4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.92■■■□□ 2.22
Mtss1Q8R1S4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Mtss1Q8R1S4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.88■■■□□ 2.21
Mtss1Q8R1S4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Mtss1Q8R1S4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Mtss1Q8R1S4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.8■■■□□ 2.2
Mtss1Q8R1S4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Mtss1Q8R1S4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms