RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 ASP1P38986 381 aaPredicted RBP-0.1□□□□□ -2.43
snR50snR50 FHL1P39521 936 aa-0.1□□□□□ -2.43
snR50snR50 ISC1P40015 477 aaKnown RBP-0.1□□□□□ -2.43
snR50snR50 DPH1P40487 425 aaKnown RBP-0.1□□□□□ -2.43
snR50snR50 ATG18P43601 500 aa-0.1□□□□□ -2.43
snR50snR50 BNS1P50084 137 aa-0.1□□□□□ -2.43
snR50snR50 COG1P53079 417 aa-0.1□□□□□ -2.43
snR50snR50 TEP1P53916 434 aa-0.1□□□□□ -2.43
snR50snR50 BUD22Q04347 519 aaKnown RBP-0.1□□□□□ -2.43
snR50snR50 DPB4Q04603 196 aaKnown RBP-0.1□□□□□ -2.43
snR50snR50 RIF2Q06208 395 aa-0.1□□□□□ -2.43
snR50snR50 SKG3Q06315 1026 aa-0.1□□□□□ -2.43
snR50snR50 CDD1Q06549 142 aa-0.1□□□□□ -2.43
snR50snR50 SNX3Q08826 162 aaKnown RBP-0.1□□□□□ -2.43
snR50snR50 SMF3Q12078 473 aaPredicted RBP-0.1□□□□□ -2.43
snR50snR50 TIR4Q12218 487 aaPredicted RBP-0.1□□□□□ -2.43
snR50snR50 SNU66Q12420 587 aaPredicted RBP-0.1□□□□□ -2.43
snR50snR50 TOP1P04786 769 aa-0.11□□□□□ -2.43
snR50snR50 CDC16P09798 840 aa-0.11□□□□□ -2.43
snR50snR50 TFS1P14306 219 aa-0.11□□□□□ -2.43
snR50snR50 HSC82P15108 705 aaKnown RBP-0.11□□□□□ -2.43
snR50snR50 VMA16P23968 213 aa-0.11□□□□□ -2.43
snR50snR50 ERG8P24521 451 aa-0.11□□□□□ -2.43
snR50snR50 ELO2P25358 347 aa-0.11□□□□□ -2.43
snR50snR50 IMG1P25626 169 aa-0.11□□□□□ -2.43
snR50snR50 ANR2P36090 516 aaPredicted RBP-0.11□□□□□ -2.43
snR50snR50 REG2P38232 338 aa-0.11□□□□□ -2.43
snR50snR50 SPC72P39723 622 aa-0.11□□□□□ -2.43
snR50snR50 SLZ1P40167 298 aa-0.11□□□□□ -2.43
snR50snR50 SYG1P40528 902 aa-0.11□□□□□ -2.43
snR50snR50 IGD1P43598 195 aa-0.11□□□□□ -2.43
snR50snR50 RPS7BP48164 190 aaKnown RBP-0.11□□□□□ -2.43
snR50snR50 NUP57P48837 541 aa-0.11□□□□□ -2.43
snR50snR50 VID30P53076 958 aa-0.11□□□□□ -2.43
snR50snR50 YGL088WP53151 121 aa-0.11□□□□□ -2.43
snR50snR50 LCL3P53153 274 aa-0.11□□□□□ -2.43
snR50snR50 MST27P53176 234 aa-0.11□□□□□ -2.43
snR50snR50 PIL1P53252 339 aaKnown RBP-0.11□□□□□ -2.43
snR50snR50 YNR048WP53740 393 aa-0.11□□□□□ -2.43
snR50snR50 COG6P53959 839 aa-0.11□□□□□ -2.43
snR50snR50 TOF2Q02208 771 aa-0.11□□□□□ -2.43
snR50snR50 SKI8Q02793 397 aaPredicted RBP-0.11□□□□□ -2.43
snR50snR50 MIX17Q03667 156 aa-0.11□□□□□ -2.43
snR50snR50 INP2Q03824 705 aa-0.11□□□□□ -2.43
snR50snR50 MYO5Q04439 1219 aaKnown RBP-0.11□□□□□ -2.43
snR50snR50 SOV1Q04748 898 aa-0.11□□□□□ -2.43
snR50snR50 RRP9Q06506 573 aaKnown RBP-0.11□□□□□ -2.43
snR50snR50 COX17Q12287 69 aa-0.11□□□□□ -2.43
snR50snR50 CEX1Q12453 761 aa-0.11□□□□□ -2.43
snR50snR50 YOL085CQ99345 113 aa-0.11□□□□□ -2.43
snR50snR50 MES1P00958 751 aaKnown RBP-0.12□□□□□ -2.43
snR50snR50 TPK1P06244 397 aa-0.12□□□□□ -2.43
snR50snR50 SST2P11972 698 aaKnown RBP-0.12□□□□□ -2.43
snR50snR50 FUS3P16892 353 aaKnown RBP-0.12□□□□□ -2.43
snR50snR50 PRP2P20095 876 aaPredicted RBP-0.12□□□□□ -2.43
snR50snR50 SLY1P22213 666 aa-0.12□□□□□ -2.43
snR50snR50 CLB4P24871 460 aa-0.12□□□□□ -2.43
snR50snR50 MIG1P27705 504 aa-0.12□□□□□ -2.43
snR50snR50 ITR1P30605 584 aa-0.12□□□□□ -2.43
snR50snR50 ATP11P32453 318 aa-0.12□□□□□ -2.43
snR50snR50 YKR032WP36127 104 aa-0.12□□□□□ -2.43
snR50snR50 ENP1P38333 483 aaKnown RBP-0.12□□□□□ -2.43
snR50snR50 AXL2P38928 823 aa-0.12□□□□□ -2.43
snR50snR50 PTI1P39927 425 aaPredicted RBP-0.12□□□□□ -2.43
snR50snR50 PUG1P40100 303 aa-0.12□□□□□ -2.43
snR50snR50 JLP2P40206 208 aa-0.12□□□□□ -2.43
snR50snR50 YIL059CP40520 121 aa-0.12□□□□□ -2.43
snR50snR50 CLD1P53264 445 aa-0.12□□□□□ -2.43
snR50snR50 ZPR1P53303 486 aaKnown RBP-0.12□□□□□ -2.43
snR50snR50 RHO5P53879 331 aaKnown RBP-0.12□□□□□ -2.43
snR50snR50 RCO1Q04779 684 aa-0.12□□□□□ -2.43
snR50snR50 YGK3Q12222 375 aaPredicted RBP-0.12□□□□□ -2.43
snR50snR50 YOL114CQ12322 202 aa-0.12□□□□□ -2.43
snR50snR50 RTP1Q12751 981 aa-0.12□□□□□ -2.43
snR50snR50 ARG4P04076 463 aaPredicted RBP-0.13□□□□□ -2.43
snR50snR50 CKA2P19454 339 aa-0.13□□□□□ -2.43
snR50snR50 PAP1P29468 568 aaKnown RBP-0.13□□□□□ -2.43
snR50snR50 SSE2P32590 693 aaKnown RBP-0.13□□□□□ -2.43
snR50snR50 GYP6P32806 458 aa-0.13□□□□□ -2.43
snR50snR50 MRE11P32829 692 aa-0.13□□□□□ -2.43
snR50snR50 YBR144CP34215 104 aa-0.13□□□□□ -2.43
snR50snR50 YCR041WP37265 110 aa-0.13□□□□□ -2.43
snR50snR50 ECM34P38728 170 aa-0.13□□□□□ -2.43
snR50snR50 POP2P39008 433 aa-0.13□□□□□ -2.43
snR50snR50 PEX22P39718 180 aa-0.13□□□□□ -2.43
snR50snR50 RBG1P39729 369 aa-0.13□□□□□ -2.43
snR50snR50 PCL7P40186 285 aa-0.13□□□□□ -2.43
snR50snR50 YJR142WP47173 342 aa-0.13□□□□□ -2.43
snR50snR50 HSH155P49955 971 aaKnown RBP-0.13□□□□□ -2.43
snR50snR50 YIP1P53039 248 aa-0.13□□□□□ -2.43
snR50snR50 TGL2P54857 326 aa-0.13□□□□□ -2.43
snR50snR50 REG1Q00816 1014 aa-0.13□□□□□ -2.43
snR50snR50 RTN1Q04947 295 aaKnown RBP-0.13□□□□□ -2.43
snR50snR50 HIM1Q06674 414 aa-0.13□□□□□ -2.43
snR50snR50 SGT1Q08446 395 aa-0.13□□□□□ -2.43
snR50snR50 DDC1Q08949 612 aa-0.13□□□□□ -2.43
snR50snR50 YPL272CQ08984 517 aa-0.13□□□□□ -2.43
snR50snR50 NYV1Q12255 253 aa-0.13□□□□□ -2.43
snR50snR50 NAG1Q8TGN9 163 aa-0.13□□□□□ -2.43
snR50snR50 AUS1Q08409 1394 aa-0.14□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms