RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W NOP13P53883 403 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
HFI1YPL254W RMI1Q02685 241 aa5.39□□□□□ -1.55
HFI1YPL254W TRS31Q03337 283 aa5.39□□□□□ -1.55
HFI1YPL254W SPG3Q04398 127 aaPredicted RBP5.39□□□□□ -1.55
HFI1YPL254W HRD3Q05787 833 aa5.39□□□□□ -1.55
HFI1YPL254W ARR3Q06598 404 aa5.39□□□□□ -1.55
HFI1YPL254W RPN8Q08723 338 aaKnown RBP5.39□□□□□ -1.55
HFI1YPL254W VCX1Q99385 411 aa5.39□□□□□ -1.55
HFI1YPL254W UBR2Q07963 1872 aa5.38□□□□□ -1.55
HFI1YPL254W SUC2P00724 532 aa5.38□□□□□ -1.55
HFI1YPL254W ATP6P00854 259 aa5.38□□□□□ -1.55
HFI1YPL254W TPK1P06244 397 aa5.38□□□□□ -1.55
HFI1YPL254W MIS1P09440 975 aaKnown RBP5.38□□□□□ -1.55
HFI1YPL254W YIH1P25637 258 aa5.38□□□□□ -1.55
HFI1YPL254W TFB1P32776 642 aa5.38□□□□□ -1.55
HFI1YPL254W ATO2P32907 282 aa5.38□□□□□ -1.55
HFI1YPL254W NIC96P34077 839 aa5.38□□□□□ -1.55
HFI1YPL254W DHR2P36009 735 aaPredicted RBP5.38□□□□□ -1.55
HFI1YPL254W YBR056WP38081 501 aa5.38□□□□□ -1.55
HFI1YPL254W PRM9P39551 298 aa5.38□□□□□ -1.55
HFI1YPL254W SEO1P39709 593 aa5.38□□□□□ -1.55
HFI1YPL254W MIT1P40002 666 aa5.38□□□□□ -1.55
HFI1YPL254W LRO1P40345 661 aa5.38□□□□□ -1.55
HFI1YPL254W YJR061WP40355 935 aa5.38□□□□□ -1.55
HFI1YPL254W YIL166CP40445 542 aa5.38□□□□□ -1.55
HFI1YPL254W COA1P40452 197 aa5.38□□□□□ -1.55
HFI1YPL254W YIL089WP40500 205 aa5.38□□□□□ -1.55
HFI1YPL254W RMR1P53060 241 aa5.38□□□□□ -1.55
HFI1YPL254W YNL058CP53947 316 aa5.38□□□□□ -1.55
HFI1YPL254W YNL033WP53964 284 aa5.38□□□□□ -1.55
HFI1YPL254W YNL019CP53975 284 aa5.38□□□□□ -1.55
HFI1YPL254W NGL2Q03264 515 aaKnown RBP5.38□□□□□ -1.55
HFI1YPL254W TAF12Q03761 539 aa5.38□□□□□ -1.55
HFI1YPL254W RAD30Q04049 632 aa5.38□□□□□ -1.55
HFI1YPL254W HSP31Q04432 237 aa5.38□□□□□ -1.55
HFI1YPL254W YMR226CQ05016 267 aaKnown RBP5.38□□□□□ -1.55
HFI1YPL254W ECM30Q06673 1274 aa5.38□□□□□ -1.55
HFI1YPL254W LOT6Q07923 191 aa5.38□□□□□ -1.55
HFI1YPL254W SGT1Q08446 395 aa5.38□□□□□ -1.55
HFI1YPL254W HUA2Q12134 243 aa5.38□□□□□ -1.55
HFI1YPL254W NBP2Q12163 236 aa5.38□□□□□ -1.55
HFI1YPL254W MSH5Q12175 901 aa5.38□□□□□ -1.55
HFI1YPL254W MDY2Q12285 212 aa5.38□□□□□ -1.55
HFI1YPL254W PHO5P00635 467 aa5.37□□□□□ -1.55
HFI1YPL254W MSS18P08593 268 aa5.37□□□□□ -1.55
HFI1YPL254W STE12P13574 688 aa5.37□□□□□ -1.55
HFI1YPL254W NMT1P14743 455 aa5.37□□□□□ -1.55
HFI1YPL254W STE4P18851 423 aa5.37□□□□□ -1.55
HFI1YPL254W VPS33P20795 691 aa5.37□□□□□ -1.55
HFI1YPL254W VPS3P23643 1011 aa5.37□□□□□ -1.55
HFI1YPL254W PHO3P24031 467 aa5.37□□□□□ -1.55
HFI1YPL254W YSP3P25036 478 aa5.37□□□□□ -1.55
HFI1YPL254W RVS161P25343 265 aaKnown RBP5.37□□□□□ -1.55
HFI1YPL254W CTR86P25355 563 aa5.37□□□□□ -1.55
HFI1YPL254W RSA4P25382 515 aaKnown RBP5.37□□□□□ -1.55
HFI1YPL254W YCR090CP25654 182 aaKnown RBP5.37□□□□□ -1.55
HFI1YPL254W RAD16P31244 790 aa5.37□□□□□ -1.55
HFI1YPL254W PTM1P32857 523 aa5.37□□□□□ -1.55
HFI1YPL254W RPT5P33297 434 aaKnown RBP5.37□□□□□ -1.55
HFI1YPL254W CSE1P33307 960 aa5.37□□□□□ -1.55
HFI1YPL254W CSE2P33308 149 aa5.37□□□□□ -1.55
HFI1YPL254W UTP9P38882 575 aaKnown RBP5.37□□□□□ -1.55
HFI1YPL254W YJL193WP39542 402 aa5.37□□□□□ -1.55
HFI1YPL254W ARB1P40024 610 aaKnown RBP5.37□□□□□ -1.55
HFI1YPL254W MAD2P40958 196 aa5.37□□□□□ -1.55
HFI1YPL254W ROK1P45818 564 aaPredicted RBP5.37□□□□□ -1.55
HFI1YPL254W SHE4P51534 789 aa5.37□□□□□ -1.55
HFI1YPL254W NOP19P53317 196 aaPredicted RBP5.37□□□□□ -1.55
HFI1YPL254W REG1Q00816 1014 aa5.37□□□□□ -1.55
HFI1YPL254W STP1Q00947 519 aa5.37□□□□□ -1.55
HFI1YPL254W RLI1Q03195 608 aaKnown RBP5.37□□□□□ -1.55
HFI1YPL254W RPN9Q04062 393 aaKnown RBP5.37□□□□□ -1.55
HFI1YPL254W GMC2Q06201 188 aa5.37□□□□□ -1.55
HFI1YPL254W DTD1Q07648 150 aaKnown RBP5.37□□□□□ -1.55
HFI1YPL254W DNL4Q08387 944 aaPredicted RBP5.37□□□□□ -1.55
HFI1YPL254W VIK1Q12045 647 aa5.37□□□□□ -1.55
HFI1YPL254W ULA1Q12059 462 aa5.37□□□□□ -1.55
HFI1YPL254W IES3Q12345 250 aa5.37□□□□□ -1.55
HFI1YPL254W ARP7Q12406 477 aa5.37□□□□□ -1.55
HFI1YPL254W URA3P03962 267 aa5.36□□□□□ -1.55
HFI1YPL254W TPK2P06245 380 aa5.36□□□□□ -1.55
HFI1YPL254W BCY1P07278 416 aaKnown RBP5.36□□□□□ -1.55
HFI1YPL254W SEC53P07283 254 aaKnown RBP5.36□□□□□ -1.55
HFI1YPL254W SEC12P11655 471 aa5.36□□□□□ -1.55
HFI1YPL254W PHO81P17442 1178 aa5.36□□□□□ -1.55
HFI1YPL254W UGA1P17649 471 aa5.36□□□□□ -1.55
HFI1YPL254W CSM1P25651 190 aa5.36□□□□□ -1.55
HFI1YPL254W BUB2P26448 306 aaPredicted RBP5.36□□□□□ -1.55
HFI1YPL254W SAC1P32368 623 aaKnown RBP5.36□□□□□ -1.55
HFI1YPL254W PET309P32522 965 aaPredicted RBP5.36□□□□□ -1.55
HFI1YPL254W CYS4P32582 507 aaKnown RBP5.36□□□□□ -1.55
HFI1YPL254W NUF2P33895 451 aa5.36□□□□□ -1.55
HFI1YPL254W MRP21P38175 177 aa5.36□□□□□ -1.55
HFI1YPL254W YBR285WP38354 144 aa5.36□□□□□ -1.55
HFI1YPL254W URA8P38627 578 aaPredicted RBP5.36□□□□□ -1.55
HFI1YPL254W MUP3P38734 546 aa5.36□□□□□ -1.55
HFI1YPL254W CYC2P38909 366 aa5.36□□□□□ -1.55
HFI1YPL254W FAA2P39518 744 aa5.36□□□□□ -1.55
HFI1YPL254W YHB1P39676 399 aaKnown RBP5.36□□□□□ -1.55
HFI1YPL254W SWD1P39706 426 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 131.6 ms