RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C PET127P32606 800 aa3.39□□□□□ -1.87
VPS53YJL029C ALG3P38179 458 aa3.39□□□□□ -1.87
VPS53YJL029C LIN1P38852 340 aaPredicted RBP3.39□□□□□ -1.87
VPS53YJL029C CAB2P40506 365 aa3.39□□□□□ -1.87
VPS53YJL029C YIL067CP40514 678 aa3.39□□□□□ -1.87
VPS53YJL029C FKH2P41813 862 aa3.39□□□□□ -1.87
VPS53YJL029C LCL3P53153 274 aa3.39□□□□□ -1.87
VPS53YJL029C ERG26P53199 349 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C FHN1P53279 174 aa3.39□□□□□ -1.87
VPS53YJL029C MPS1P54199 764 aa3.39□□□□□ -1.87
VPS53YJL029C LSM3P57743 89 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C RPM2Q02773 1202 aa3.39□□□□□ -1.87
VPS53YJL029C TVP15Q03860 143 aa3.39□□□□□ -1.87
VPS53YJL029C ECM11Q04110 302 aa3.39□□□□□ -1.87
VPS53YJL029C CDA1Q06702 301 aa3.39□□□□□ -1.87
VPS53YJL029C GPB1Q08886 897 aa3.39□□□□□ -1.87
VPS53YJL029C GLE1Q12315 538 aa3.39□□□□□ -1.87
VPS53YJL029C NCA2Q12374 616 aa3.39□□□□□ -1.87
VPS53YJL029C NOT5Q12514 560 aaPredicted RBP3.39□□□□□ -1.87
VPS53YJL029C RPS17AP02407 136 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C STE7P06784 515 aa3.39□□□□□ -1.87
VPS53YJL029C KIN2P13186 1147 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C RPS17BP14127 136 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C ASK1P35734 292 aa3.39□□□□□ -1.87
VPS53YJL029C VPS21P36017 210 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C OAF3P36023 863 aa3.39□□□□□ -1.87
VPS53YJL029C OSH7P38755 437 aa3.39□□□□□ -1.87
VPS53YJL029C UTP9P38882 575 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C SEC24P40482 926 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C IBA57P47158 497 aa3.39□□□□□ -1.87
VPS53YJL029C MTR3P48240 250 aaPredicted RBP3.39□□□□□ -1.87
VPS53YJL029C NOP19P53317 196 aaPredicted RBP3.39□□□□□ -1.87
VPS53YJL029C SDH1Q00711 640 aa3.39□□□□□ -1.87
VPS53YJL029C GAS3Q03655 524 aa3.39□□□□□ -1.87
VPS53YJL029C EMG1Q06287 252 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C UAF30Q08747 228 aa3.39□□□□□ -1.87
VPS53YJL029C YPL245WQ12179 454 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C TY1A-DR3Q12441 440 aa3.39□□□□□ -1.87
VPS53YJL029C MHT1Q12525 324 aa3.39□□□□□ -1.87
VPS53YJL029C ARG4P04076 463 aaPredicted RBP3.38□□□□□ -1.87
VPS53YJL029C SRV2P17555 526 aaKnown RBP3.38□□□□□ -1.87
VPS53YJL029C DBR1P24309 405 aaKnown RBP3.38□□□□□ -1.87
VPS53YJL029C MGR1P25573 417 aa3.38□□□□□ -1.87
VPS53YJL029C CAB3P36076 571 aa3.38□□□□□ -1.87
VPS53YJL029C YEN1P40028 759 aa3.38□□□□□ -1.87
VPS53YJL029C YIL001WP40560 513 aa3.38□□□□□ -1.87
VPS53YJL029C YRB1P41920 201 aaKnown RBP3.38□□□□□ -1.87
VPS53YJL029C MRPS18P42847 217 aa3.38□□□□□ -1.87
VPS53YJL029C FAR3P46671 204 aa3.38□□□□□ -1.87
VPS53YJL029C MPS3P47069 682 aa3.38□□□□□ -1.87
VPS53YJL029C YJR142WP47173 342 aa3.38□□□□□ -1.87
VPS53YJL029C AIF1P52923 378 aa3.38□□□□□ -1.87
VPS53YJL029C GOR1P53839 350 aa3.38□□□□□ -1.87
VPS53YJL029C YML119WQ03208 357 aa3.38□□□□□ -1.87
VPS53YJL029C YMR210WQ03649 449 aa3.38□□□□□ -1.87
VPS53YJL029C FAR8Q05040 523 aa3.38□□□□□ -1.87
VPS53YJL029C MCA1Q08601 432 aa3.38□□□□□ -1.87
VPS53YJL029C OCA4P25366 362 aa3.38□□□□□ -1.87
VPS53YJL029C SPB1P25582 841 aaPredicted RBP3.38□□□□□ -1.87
VPS53YJL029C FAA1P30624 700 aaKnown RBP3.38□□□□□ -1.87
VPS53YJL029C FUN30P31380 1131 aa3.38□□□□□ -1.87
VPS53YJL029C SUI1P32911 108 aaKnown RBP3.38□□□□□ -1.87
VPS53YJL029C SDH3P33421 198 aa3.38□□□□□ -1.87
VPS53YJL029C FRE2P36033 711 aa3.38□□□□□ -1.87
VPS53YJL029C CAF4P36130 643 aa3.38□□□□□ -1.87
VPS53YJL029C OMA1P36163 345 aa3.38□□□□□ -1.87
VPS53YJL029C BZZ1P38822 633 aa3.38□□□□□ -1.87
VPS53YJL029C MET30P39014 640 aa3.38□□□□□ -1.87
VPS53YJL029C SER3P40054 469 aa3.38□□□□□ -1.87
VPS53YJL029C PRM10P42946 383 aa3.38□□□□□ -1.87
VPS53YJL029C YNL140CP53910 189 aa3.38□□□□□ -1.87
VPS53YJL029C YPL066WQ12194 479 aa3.38□□□□□ -1.87
VPS53YJL029C ARD1P07347 238 aaPredicted RBP3.37□□□□□ -1.87
VPS53YJL029C GCD2P12754 651 aaPredicted RBP3.37□□□□□ -1.87
VPS53YJL029C SGV1P23293 657 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C PHO91P27514 894 aa3.37□□□□□ -1.87
VPS53YJL029C CTS1P29029 562 aa3.37□□□□□ -1.87
VPS53YJL029C SPO23P33757 523 aa3.37□□□□□ -1.87
VPS53YJL029C CTP1P38152 299 aa3.37□□□□□ -1.87
VPS53YJL029C YBR032WP38223 100 aa3.37□□□□□ -1.87
VPS53YJL029C ICE2P40499 491 aa3.37□□□□□ -1.87
VPS53YJL029C NEO1P40527 1151 aa3.37□□□□□ -1.87
VPS53YJL029C TAF6P53040 516 aa3.37□□□□□ -1.87
VPS53YJL029C TY1A-MR1Q04215 440 aa3.37□□□□□ -1.87
VPS53YJL029C YMR111CQ04461 462 aaPredicted RBP3.37□□□□□ -1.87
VPS53YJL029C MDM30Q05930 598 aa3.37□□□□□ -1.87
VPS53YJL029C BOP2Q06150 570 aa3.37□□□□□ -1.87
VPS53YJL029C NBA1Q08229 501 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C REX4Q08237 289 aa3.37□□□□□ -1.87
VPS53YJL029C RRP40Q08285 240 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C TMA46Q12000 345 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C AKR2Q12013 749 aa3.37□□□□□ -1.87
VPS53YJL029C RUP1Q12242 671 aa3.37□□□□□ -1.87
VPS53YJL029C PAR32Q12515 295 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C IRA2P19158 3079 aa3.37□□□□□ -1.87
VPS53YJL029C HXK2P04807 486 aaKnown RBP3.37□□□□□ -1.87
VPS53YJL029C COS2P0CX12 379 aa3.37□□□□□ -1.87
VPS53YJL029C COS3P0CX13 379 aa3.37□□□□□ -1.87
VPS53YJL029C MRP13P12686 339 aa3.37□□□□□ -1.87
VPS53YJL029C TRX3P25372 127 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms