RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W PMT1P33775 817 aa3.56□□□□□ -1.84
SEC28YIL076W CMC1P36064 111 aa3.56□□□□□ -1.84
SEC28YIL076W MSG5P38590 489 aa3.56□□□□□ -1.84
SEC28YIL076W TFG2P41896 400 aaPredicted RBP3.56□□□□□ -1.84
SEC28YIL076W SHY1P53266 389 aa3.56□□□□□ -1.84
SEC28YIL076W DSL1P53847 754 aa3.56□□□□□ -1.84
SEC28YIL076W HXT11P54862 567 aa3.56□□□□□ -1.84
SEC28YIL076W HER2Q03557 464 aa3.56□□□□□ -1.84
SEC28YIL076W IMH1Q06704 911 aaKnown RBP3.56□□□□□ -1.84
SEC28YIL076W YPR022CQ12139 1133 aa3.56□□□□□ -1.84
SEC28YIL076W PKH2Q12236 1081 aaKnown RBP3.56□□□□□ -1.84
SEC28YIL076W RPS8AP0CX39 200 aaKnown RBP3.55□□□□□ -1.84
SEC28YIL076W RPS8BP0CX40 200 aaKnown RBP3.55□□□□□ -1.84
SEC28YIL076W ECM25P32525 599 aa3.55□□□□□ -1.84
SEC28YIL076W CCT2P39076 527 aaKnown RBP3.55□□□□□ -1.84
SEC28YIL076W VMA13P41807 478 aaKnown RBP3.55□□□□□ -1.84
SEC28YIL076W HXT14P42833 540 aa3.55□□□□□ -1.84
SEC28YIL076W RMD9P53140 646 aaKnown RBP3.55□□□□□ -1.84
SEC28YIL076W PPM1Q04081 328 aa3.55□□□□□ -1.84
SEC28YIL076W YDR387CQ04162 555 aa3.55□□□□□ -1.84
SEC28YIL076W YMR027WQ04371 470 aa3.55□□□□□ -1.84
SEC28YIL076W TRP1P00912 224 aa3.54□□□□□ -1.84
SEC28YIL076W ITR1P30605 584 aa3.54□□□□□ -1.84
SEC28YIL076W GPI10P30777 616 aa3.54□□□□□ -1.84
SEC28YIL076W NIP100P33420 868 aa3.54□□□□□ -1.84
SEC28YIL076W VID24P38263 362 aa3.54□□□□□ -1.84
SEC28YIL076W YBR137WP38276 179 aa3.54□□□□□ -1.84
SEC28YIL076W TIM18Q08749 192 aa3.54□□□□□ -1.84
SEC28YIL076W WTM1Q12363 437 aaKnown RBP3.54□□□□□ -1.84
SEC28YIL076W IMP2'P32351 346 aa3.53□□□□□ -1.84
SEC28YIL076W APE2P32454 952 aaKnown RBP3.53□□□□□ -1.84
SEC28YIL076W MNS1P32906 549 aa3.53□□□□□ -1.84
SEC28YIL076W MET18P40469 1032 aa3.53□□□□□ -1.84
SEC28YIL076W HSP31Q04432 237 aa3.53□□□□□ -1.84
SEC28YIL076W ARG3P05150 338 aa3.52□□□□□ -1.85
SEC28YIL076W SLY1P22213 666 aa3.52□□□□□ -1.85
SEC28YIL076W PRP21P32524 280 aaPredicted RBP3.52□□□□□ -1.85
SEC28YIL076W ECM27P47144 725 aa3.52□□□□□ -1.85
SEC28YIL076W PEX25Q02969 394 aa3.52□□□□□ -1.85
SEC28YIL076W FDH1Q08911 376 aa3.52□□□□□ -1.85
SEC28YIL076W SPS4P09937 338 aa3.51□□□□□ -1.85
SEC28YIL076W NFT1P0CE68 1218 aa3.51□□□□□ -1.85
SEC28YIL076W RPI1P23250 407 aaKnown RBP3.51□□□□□ -1.85
SEC28YIL076W MTM1P53320 366 aa3.51□□□□□ -1.85
SEC28YIL076W FRE4P53746 719 aa3.51□□□□□ -1.85
SEC28YIL076W CWC25P53854 179 aaKnown RBP3.51□□□□□ -1.85
SEC28YIL076W YMR181CQ03231 154 aa3.51□□□□□ -1.85
SEC28YIL076W SNX3Q08826 162 aaKnown RBP3.51□□□□□ -1.85
SEC28YIL076W RIM20Q12033 661 aa3.51□□□□□ -1.85
SEC28YIL076W HIS4P00815 799 aaKnown RBP3.5□□□□□ -1.85
SEC28YIL076W PCL1P24867 279 aa3.5□□□□□ -1.85
SEC28YIL076W UTH1P36135 365 aa3.5□□□□□ -1.85
SEC28YIL076W VTC2P43585 828 aa3.5□□□□□ -1.85
SEC28YIL076W YIF1P53845 314 aaKnown RBP3.5□□□□□ -1.85
SEC28YIL076W JJJ1P53863 590 aa3.5□□□□□ -1.85
SEC28YIL076W HAL1Q01766 294 aa3.5□□□□□ -1.85
SEC28YIL076W RSN1Q03516 953 aa3.5□□□□□ -1.85
SEC28YIL076W RQC1Q05468 723 aaKnown RBP3.5□□□□□ -1.85
SEC28YIL076W PPH22P23595 377 aa3.49□□□□□ -1.85
SEC28YIL076W YNR048WP53740 393 aa3.49□□□□□ -1.85
SEC28YIL076W GIR2Q03768 265 aaPredicted RBP3.49□□□□□ -1.85
SEC28YIL076W SYF1Q04048 859 aaPredicted RBP3.49□□□□□ -1.85
SEC28YIL076W TEF1P02994 458 aaKnown RBP3.48□□□□□ -1.85
SEC28YIL076W TSA2Q04120 196 aa3.48□□□□□ -1.85
SEC28YIL076W ARG4P04076 463 aaPredicted RBP3.47□□□□□ -1.85
SEC28YIL076W TOP1P04786 769 aa3.47□□□□□ -1.85
SEC28YIL076W CYC3P06182 269 aa3.47□□□□□ -1.85
SEC28YIL076W GPH1P06738 902 aaKnown RBP3.47□□□□□ -1.85
SEC28YIL076W RIP1P08067 215 aa3.47□□□□□ -1.85
SEC28YIL076W RPL3P14126 387 aaKnown RBP3.47□□□□□ -1.85
SEC28YIL076W POP5P28005 173 aa3.47□□□□□ -1.85
SEC28YIL076W HXT3P32466 567 aaKnown RBP3.47□□□□□ -1.85
SEC28YIL076W MUD1P32605 298 aaKnown RBP3.47□□□□□ -1.85
SEC28YIL076W KKQ8P36004 724 aa3.47□□□□□ -1.85
SEC28YIL076W MRPL10P36520 322 aa3.47□□□□□ -1.85
SEC28YIL076W LYS1P38998 373 aaRIP-Chip data3.47□□□□□ -1.85not detected
SEC28YIL076W SAS2P40963 338 aa3.47□□□□□ -1.85
SEC28YIL076W MDG1P53885 366 aa3.47□□□□□ -1.85
SEC28YIL076W SEC63P14906 663 aa3.46□□□□□ -1.86
SEC28YIL076W VHC1P38329 1120 aa3.46□□□□□ -1.86
SEC28YIL076W YHR054CP38780 354 aa3.46□□□□□ -1.86
SEC28YIL076W YHR131CP38835 850 aa3.46□□□□□ -1.86
SEC28YIL076W ARF3P40994 183 aaRIP-Chip data3.46□□□□□ -1.86not detected
SEC28YIL076W SSU1P41930 458 aa3.46□□□□□ -1.86
SEC28YIL076W BRO1P48582 844 aa3.46□□□□□ -1.86
SEC28YIL076W SGT1Q08446 395 aa3.46□□□□□ -1.86
SEC28YIL076W MED1Q12321 566 aa3.46□□□□□ -1.86
SEC28YIL076W GRX6Q12438 231 aa3.46□□□□□ -1.86
SEC28YIL076W SIL1Q08199 421 aa3.45□□□□□ -1.86
SEC28YIL076W ORT1Q12375 292 aa3.45□□□□□ -1.86
SEC28YIL076W RTP1Q12751 981 aa3.45□□□□□ -1.86
SEC28YIL076W FAB1P34756 2278 aa3.45□□□□□ -1.86
SEC28YIL076W SNT1P25357 1226 aa3.44□□□□□ -1.86
SEC28YIL076W LSB5P25369 354 aa3.44□□□□□ -1.86
SEC28YIL076W KAR9P32526 644 aa3.44□□□□□ -1.86
SEC28YIL076W SMF1P38925 575 aa3.44□□□□□ -1.86
SEC28YIL076W ESL1P40456 1118 aa3.44□□□□□ -1.86
SEC28YIL076W HMS2P47175 358 aa3.44□□□□□ -1.86
SEC28YIL076W IRC25Q07951 179 aa3.44□□□□□ -1.86
SEC28YIL076W YDL012CQ12489 107 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms