RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C AVL9Q12500 764 aa1.76□□□□□ -2.13
RTR1YER139C FOB1O13329 566 aa1.75□□□□□ -2.13
RTR1YER139C OLE1P21147 510 aaKnown RBP1.75□□□□□ -2.13
RTR1YER139C YBR137WP38276 179 aa1.75□□□□□ -2.13
RTR1YER139C RCK2P38623 610 aa1.75□□□□□ -2.13
RTR1YER139C YER186CP40101 306 aa1.75□□□□□ -2.13
RTR1YER139C DFG10P40526 253 aa1.75□□□□□ -2.13
RTR1YER139C PFS2P42841 465 aaKnown RBP1.75□□□□□ -2.13
RTR1YER139C LAM5P43560 674 aa1.75□□□□□ -2.13
RTR1YER139C YGR066CP53242 292 aa1.75□□□□□ -2.13
RTR1YER139C CAF130P53280 1122 aaPredicted RBP1.75□□□□□ -2.13
RTR1YER139C VPS75P53853 264 aa1.75□□□□□ -2.13
RTR1YER139C PNG1Q02890 363 aa1.75□□□□□ -2.13
RTR1YER139C CYC3P06182 269 aa1.74□□□□□ -2.13
RTR1YER139C COR1P07256 457 aa1.74□□□□□ -2.13
RTR1YER139C DFR1P07807 211 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
RTR1YER139C MET8P15807 274 aa1.74□□□□□ -2.13
RTR1YER139C WBP1P33767 430 aaKnown RBP1.74□□□□□ -2.13
RTR1YER139C MBB1P39534 108 aa1.74□□□□□ -2.13
RTR1YER139C MIG3P39943 394 aa1.74□□□□□ -2.13
RTR1YER139C POP1P41812 875 aa1.74□□□□□ -2.13
RTR1YER139C PET130P47065 347 aa1.74□□□□□ -2.13
RTR1YER139C FLC3P53121 802 aa1.74□□□□□ -2.13
RTR1YER139C PCP1P53259 346 aa1.74□□□□□ -2.13
RTR1YER139C ARE2P53629 642 aaKnown RBP1.74□□□□□ -2.13
RTR1YER139C FIN1Q03898 291 aa1.74□□□□□ -2.13
RTR1YER139C MFB1Q04922 465 aa1.74□□□□□ -2.13
RTR1YER139C MUM3Q08750 479 aa1.74□□□□□ -2.13
RTR1YER139C AHC1Q12433 566 aa1.74□□□□□ -2.13
RTR1YER139C RRD2Q12461 358 aa1.74□□□□□ -2.13
RTR1YER139C TOP1P04786 769 aa1.73□□□□□ -2.13
RTR1YER139C PRP2P20095 876 aaPredicted RBP1.73□□□□□ -2.13
RTR1YER139C OCA4P25366 362 aa1.73□□□□□ -2.13
RTR1YER139C KAR9P32526 644 aa1.73□□□□□ -2.13
RTR1YER139C CSE2P33308 149 aa1.73□□□□□ -2.13
RTR1YER139C CST26P38226 397 aa1.73□□□□□ -2.13
RTR1YER139C YEL057CP39983 233 aa1.73□□□□□ -2.13
RTR1YER139C SPO22P40511 975 aa1.73□□□□□ -2.13
RTR1YER139C SSN8P47821 323 aa1.73□□□□□ -2.13
RTR1YER139C SUB1P54000 292 aaKnown RBP1.73□□□□□ -2.13
RTR1YER139C MED1Q12321 566 aa1.73□□□□□ -2.13
RTR1YER139C BRR1Q99177 341 aaPredicted RBP1.73□□□□□ -2.13
RTR1YER139C ARG3P05150 338 aa1.72□□□□□ -2.13
RTR1YER139C LEU4P06208 619 aaKnown RBP1.72□□□□□ -2.13
RTR1YER139C HSC82P15108 705 aaKnown RBP1.72□□□□□ -2.13
RTR1YER139C PRD1P25375 712 aa1.72□□□□□ -2.13
RTR1YER139C IMP2'P32351 346 aa1.72□□□□□ -2.13
RTR1YER139C MRE11P32829 692 aa1.72□□□□□ -2.13
RTR1YER139C PMT1P33775 817 aa1.72□□□□□ -2.13
RTR1YER139C YCR041WP37265 110 aa1.72□□□□□ -2.13
RTR1YER139C KEL1P38853 1164 aaKnown RBP1.72□□□□□ -2.13
RTR1YER139C ARF3P40994 183 aaRIP-Chip data1.72□□□□□ -2.13not detected
RTR1YER139C TIM10P87108 93 aa1.72□□□□□ -2.13
RTR1YER139C PDS5Q04264 1277 aa1.72□□□□□ -2.13
RTR1YER139C IMH1Q06704 911 aaKnown RBP1.72□□□□□ -2.13
RTR1YER139C SEC39Q12745 709 aa1.72□□□□□ -2.13
RTR1YER139C YDL007C-AQ2V2Q0 85 aa1.72□□□□□ -2.13
RTR1YER139C RAV1P47104 1357 aa1.72□□□□□ -2.13
RTR1YER139C YML133CQ03099 1374 aa1.72□□□□□ -2.13
RTR1YER139C YLL067CQ07888 1374 aa1.72□□□□□ -2.13
RTR1YER139C YLL066CQ99208 1374 aa1.72□□□□□ -2.13
RTR1YER139C MET17P06106 444 aa1.71□□□□□ -2.14
RTR1YER139C RPL31BP0C2H9 113 aaKnown RBP1.71□□□□□ -2.14
RTR1YER139C GPI10P30777 616 aa1.71□□□□□ -2.14
RTR1YER139C SPT10P35208 640 aa1.71□□□□□ -2.14
RTR1YER139C ERP2P39704 215 aa1.71□□□□□ -2.14
RTR1YER139C NDE1P40215 560 aa1.71□□□□□ -2.14
RTR1YER139C MET28P40573 187 aa1.71□□□□□ -2.14
RTR1YER139C URB2P47108 1174 aa1.71□□□□□ -2.14
RTR1YER139C TWF1P53250 332 aa1.71□□□□□ -2.14
RTR1YER139C DIA1P54005 336 aa1.71□□□□□ -2.14
RTR1YER139C YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
RTR1YER139C PLP2Q12017 286 aa1.71□□□□□ -2.14
RTR1YER139C RIM20Q12033 661 aa1.71□□□□□ -2.14
RTR1YER139C RRI2Q12348 645 aa1.71□□□□□ -2.14
RTR1YER139C MRP7P12687 371 aa1.7□□□□□ -2.14
RTR1YER139C TIP1P27654 210 aaPredicted RBP1.7□□□□□ -2.14
RTR1YER139C AFG1P32317 509 aa1.7□□□□□ -2.14
RTR1YER139C FMT1P32785 401 aa1.7□□□□□ -2.14
RTR1YER139C CMC1P36064 111 aa1.7□□□□□ -2.14
RTR1YER139C CBP4P37267 147 aa1.7□□□□□ -2.14
RTR1YER139C MUM2P38236 366 aa1.7□□□□□ -2.14
RTR1YER139C OCA1P50946 238 aaPredicted RBP1.7□□□□□ -2.14
RTR1YER139C MKC7P53379 596 aa1.7□□□□□ -2.14
RTR1YER139C MRD1Q06106 887 aaKnown RBP1.7□□□□□ -2.14
RTR1YER139C ATG29Q12092 213 aa1.7□□□□□ -2.14
RTR1YER139C PKH2Q12236 1081 aaKnown RBP1.7□□□□□ -2.14
RTR1YER139C INH1P01097 85 aa1.69□□□□□ -2.14
RTR1YER139C CKA1P15790 372 aa1.69□□□□□ -2.14
RTR1YER139C IDH2P28241 369 aaKnown RBP1.69□□□□□ -2.14
RTR1YER139C RAD14P28519 371 aa1.69□□□□□ -2.14
RTR1YER139C ITR1P30605 584 aa1.69□□□□□ -2.14
RTR1YER139C SMY1P32364 656 aaKnown RBP1.69□□□□□ -2.14
RTR1YER139C RPN12P32496 274 aa1.69□□□□□ -2.14
RTR1YER139C HXT14P42833 540 aa1.69□□□□□ -2.14
RTR1YER139C YGL108CP53139 140 aa1.69□□□□□ -2.14
RTR1YER139C CRH1P53301 507 aa1.69□□□□□ -2.14
RTR1YER139C MRPL19P53875 158 aa1.69□□□□□ -2.14
RTR1YER139C MRPS16Q02608 121 aa1.69□□□□□ -2.14
RTR1YER139C YMR181CQ03231 154 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms