RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W PNG1Q02890 363 aa3.02□□□□□ -1.93
PRE1YER012W CTF3Q12748 733 aa3.02□□□□□ -1.93
PRE1YER012W TOR2P32600 2474 aaKnown RBP3.01□□□□□ -1.93
PRE1YER012W ATR1P13090 542 aa3.01□□□□□ -1.93
PRE1YER012W VPS1P21576 704 aaKnown RBP3.01□□□□□ -1.93
PRE1YER012W IMG1P25626 169 aa3.01□□□□□ -1.93
PRE1YER012W RPL32P38061 130 aaKnown RBP3.01□□□□□ -1.93
PRE1YER012W ICS2P38284 255 aa3.01□□□□□ -1.93
PRE1YER012W PTH1P38876 190 aaKnown RBP3.01□□□□□ -1.93
PRE1YER012W VPS45P38932 577 aa3.01□□□□□ -1.93
PRE1YER012W HAT2P39984 401 aa3.01□□□□□ -1.93
PRE1YER012W AZR1P50080 613 aa3.01□□□□□ -1.93
PRE1YER012W MEP3P53390 489 aa3.01□□□□□ -1.93
PRE1YER012W RAD30Q04049 632 aa3.01□□□□□ -1.93
PRE1YER012W BNA5Q05979 453 aa3.01□□□□□ -1.93
PRE1YER012W MRPL51Q06090 140 aaPredicted RBP3.01□□□□□ -1.93
PRE1YER012W SDH5Q08230 162 aa3.01□□□□□ -1.93
PRE1YER012W NCE102Q12207 173 aaRIP-Chip data3.01□□□□□ -1.93not detected
PRE1YER012W CPR1P14832 162 aaKnown RBP3□□□□□ -1.93
PRE1YER012W RNA14P25298 677 aaKnown RBP3□□□□□ -1.93
PRE1YER012W PUT3P25502 979 aaPredicted RBP3□□□□□ -1.93
PRE1YER012W RRN3P36070 627 aa3□□□□□ -1.93
PRE1YER012W YKL023WP36103 277 aaKnown RBP3□□□□□ -1.93
PRE1YER012W EPL1P43572 832 aa3□□□□□ -1.93
PRE1YER012W RTP1Q12751 981 aa3□□□□□ -1.93
PRE1YER012W RAD52P06778 471 aaKnown RBP2.99□□□□□ -1.93
PRE1YER012W ARD1P07347 238 aaPredicted RBP2.99□□□□□ -1.93
PRE1YER012W PUP3P25451 205 aaKnown RBP2.99□□□□□ -1.93
PRE1YER012W DEG1P31115 442 aaKnown RBP2.99□□□□□ -1.93
PRE1YER012W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
PRE1YER012W YIL067CP40514 678 aa2.99□□□□□ -1.93
PRE1YER012W YFL040WP43562 540 aa2.99□□□□□ -1.93
PRE1YER012W TIS11P47977 285 aa2.99□□□□□ -1.93
PRE1YER012W ALT2P52892 507 aa2.99□□□□□ -1.93
PRE1YER012W LIF1P53150 421 aa2.99□□□□□ -1.93
PRE1YER012W YGR126WP53274 230 aa2.99□□□□□ -1.93
PRE1YER012W EFM6P53970 246 aa2.99□□□□□ -1.93
PRE1YER012W TCO89Q08921 799 aa2.99□□□□□ -1.93
PRE1YER012W YDR056CQ12025 205 aa2.99□□□□□ -1.93
PRE1YER012W BOS1P25385 244 aa2.98□□□□□ -1.93
PRE1YER012W PEP3P27801 918 aa2.98□□□□□ -1.93
PRE1YER012W CBF2P32504 956 aa2.98□□□□□ -1.93
PRE1YER012W SWD3P38123 315 aa2.98□□□□□ -1.93
PRE1YER012W DPH1P40487 425 aaKnown RBP2.98□□□□□ -1.93
PRE1YER012W GPD2P41911 440 aaKnown RBP2.98□□□□□ -1.93
PRE1YER012W LCL3P53153 274 aa2.98□□□□□ -1.93
PRE1YER012W IRC15Q02733 499 aa2.98□□□□□ -1.93
PRE1YER012W YMR018WQ04364 514 aa2.98□□□□□ -1.93
PRE1YER012W AIM33Q04516 312 aa2.98□□□□□ -1.93
PRE1YER012W IVY1Q04934 453 aa2.98□□□□□ -1.93
PRE1YER012W PHO92Q06390 306 aa2.98□□□□□ -1.93
PRE1YER012W IRA2P19158 3079 aa2.97□□□□□ -1.93
PRE1YER012W GFD2P25370 566 aaKnown RBP2.97□□□□□ -1.93
PRE1YER012W YIM1P28625 365 aa2.97□□□□□ -1.93
PRE1YER012W MUD2P36084 527 aaKnown RBP2.97□□□□□ -1.93
PRE1YER012W GAA1P39012 614 aa2.97□□□□□ -1.93
PRE1YER012W PAL1Q05518 499 aaKnown RBP2.97□□□□□ -1.93
PRE1YER012W SMD2Q06217 110 aaKnown RBP2.97□□□□□ -1.93
PRE1YER012W NBP2Q12163 236 aa2.97□□□□□ -1.93
PRE1YER012W FMP27Q06179 2628 aa2.97□□□□□ -1.93
PRE1YER012W RAD50P12753 1312 aa2.96□□□□□ -1.93
PRE1YER012W COX4P04037 155 aa2.96□□□□□ -1.94
PRE1YER012W YME1P32795 747 aa2.96□□□□□ -1.94
PRE1YER012W DRE2P36152 348 aa2.96□□□□□ -1.94
PRE1YER012W SLX1P38324 304 aa2.96□□□□□ -1.94
PRE1YER012W NAB3P38996 802 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
PRE1YER012W KAP123P40069 1113 aaKnown RBP2.96□□□□□ -1.94
PRE1YER012W SIP4P46954 829 aa2.96□□□□□ -1.94
PRE1YER012W YJR154WP47181 346 aa2.96□□□□□ -1.94
PRE1YER012W CBK1P53894 756 aa2.96□□□□□ -1.94
PRE1YER012W ARK1P53974 638 aa2.96□□□□□ -1.94
PRE1YER012W YDR341CQ05506 607 aaKnown RBP2.96□□□□□ -1.94
PRE1YER012W TMS1Q12116 473 aa2.96□□□□□ -1.94
PRE1YER012W ILV1P00927 576 aaKnown RBP2.95□□□□□ -1.94
PRE1YER012W ADE4P04046 510 aaKnown RBP2.95□□□□□ -1.94
PRE1YER012W CHS1P08004 1131 aa2.95□□□□□ -1.94
PRE1YER012W CLN3P13365 580 aa2.95□□□□□ -1.94
PRE1YER012W MRP4P32902 394 aa2.95□□□□□ -1.94
PRE1YER012W YBL059WP34224 193 aa2.95□□□□□ -1.94
PRE1YER012W RXT2P38255 430 aa2.95□□□□□ -1.94
PRE1YER012W GWT1P47026 490 aa2.95□□□□□ -1.94
PRE1YER012W VID30P53076 958 aa2.95□□□□□ -1.94
PRE1YER012W YGL138CP53122 345 aa2.95□□□□□ -1.94
PRE1YER012W COG4Q06096 861 aa2.95□□□□□ -1.94
PRE1YER012W OPY2Q06810 360 aa2.95□□□□□ -1.94
PRE1YER012W YOR365CQ08844 703 aa2.95□□□□□ -1.94
PRE1YER012W HSH49Q99181 213 aaPredicted RBP2.95□□□□□ -1.94
PRE1YER012W LAA1P39526 2014 aa2.95□□□□□ -1.94
PRE1YER012W TEL1P38110 2787 aa2.94□□□□□ -1.94
PRE1YER012W SUC2P00724 532 aa2.94□□□□□ -1.94
PRE1YER012W PEP4P07267 405 aaKnown RBP2.94□□□□□ -1.94
PRE1YER012W SPT15P13393 240 aaKnown RBP2.94□□□□□ -1.94
PRE1YER012W POL4P25615 582 aa2.94□□□□□ -1.94
PRE1YER012W ADK2P26364 225 aa2.94□□□□□ -1.94
PRE1YER012W HXT1P32465 570 aa2.94□□□□□ -1.94
PRE1YER012W YBR144CP34215 104 aa2.94□□□□□ -1.94
PRE1YER012W AUR1P36107 401 aaPredicted RBP2.94□□□□□ -1.94
PRE1YER012W TVP38P36164 337 aa2.94□□□□□ -1.94
PRE1YER012W ERP2P39704 215 aa2.94□□□□□ -1.94
PRE1YER012W FAR3P46671 204 aa2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 81.5 ms