RNA–Protein interactions for RNA: YEL048C

TCA17, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TCA17, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCA17YEL048C MRPL35Q06678 367 aa3.85□□□□□ -1.79
TCA17YEL048C PKH2Q12236 1081 aaKnown RBP3.85□□□□□ -1.79
TCA17YEL048C MRP7P12687 371 aa3.84□□□□□ -1.79
TCA17YEL048C PET123P17558 318 aa3.84□□□□□ -1.79
TCA17YEL048C ISY1P21374 235 aaPredicted RBP3.84□□□□□ -1.79
TCA17YEL048C TIP1P27654 210 aaPredicted RBP3.84□□□□□ -1.79
TCA17YEL048C APE2P32454 952 aaKnown RBP3.84□□□□□ -1.79
TCA17YEL048C NIP100P33420 868 aa3.84□□□□□ -1.79
TCA17YEL048C PIM1P36775 1133 aa3.84□□□□□ -1.79
TCA17YEL048C SWD3P38123 315 aa3.84□□□□□ -1.79
TCA17YEL048C OTU2P38747 307 aaKnown RBP3.84□□□□□ -1.79
TCA17YEL048C PRM5P40476 318 aa3.84□□□□□ -1.79
TCA17YEL048C ECM27P47144 725 aa3.84□□□□□ -1.79
TCA17YEL048C JJJ1P53863 590 aa3.84□□□□□ -1.79
TCA17YEL048C HRI1Q05905 244 aaKnown RBP3.84□□□□□ -1.79
TCA17YEL048C TIM18Q08749 192 aa3.84□□□□□ -1.79
TCA17YEL048C RRI2Q12348 645 aa3.84□□□□□ -1.79
TCA17YEL048C RRD2Q12461 358 aa3.84□□□□□ -1.79
TCA17YEL048C RAD61Q99359 647 aa3.84□□□□□ -1.79
TCA17YEL048C RPI1P23250 407 aaKnown RBP3.83□□□□□ -1.8
TCA17YEL048C DAL2P25335 343 aa3.83□□□□□ -1.8
TCA17YEL048C RVS161P25343 265 aaKnown RBP3.83□□□□□ -1.8
TCA17YEL048C ECM25P32525 599 aa3.83□□□□□ -1.8
TCA17YEL048C SWE1P32944 819 aa3.83□□□□□ -1.8
TCA17YEL048C HER2Q03557 464 aa3.83□□□□□ -1.8
TCA17YEL048C MHR1Q06630 226 aa3.83□□□□□ -1.8
TCA17YEL048C YLR278CQ05854 1341 aa3.82□□□□□ -1.8
TCA17YEL048C HIS4P00815 799 aaKnown RBP3.82□□□□□ -1.8
TCA17YEL048C PRP21P32524 280 aaPredicted RBP3.82□□□□□ -1.8
TCA17YEL048C MTC6P38849 526 aa3.82□□□□□ -1.8
TCA17YEL048C YIF1P53845 314 aaKnown RBP3.82□□□□□ -1.8
TCA17YEL048C YPR022CQ12139 1133 aa3.82□□□□□ -1.8
TCA17YEL048C ADH2P00331 348 aaKnown RBP3.81□□□□□ -1.8
TCA17YEL048C GPH1P06738 902 aaKnown RBP3.81□□□□□ -1.8
TCA17YEL048C PPH22P23595 377 aa3.81□□□□□ -1.8
TCA17YEL048C CDC60P26637 1090 aaKnown RBP3.81□□□□□ -1.8
TCA17YEL048C VHC1P38329 1120 aa3.81□□□□□ -1.8
TCA17YEL048C CCT2P39076 527 aaKnown RBP3.81□□□□□ -1.8
TCA17YEL048C PAN6P40459 309 aa3.81□□□□□ -1.8
TCA17YEL048C PPM1Q04081 328 aa3.81□□□□□ -1.8
TCA17YEL048C BSC6Q08280 497 aa3.81□□□□□ -1.8
TCA17YEL048C RPL3P14126 387 aaKnown RBP3.8□□□□□ -1.8
TCA17YEL048C HXT1P32465 570 aa3.8□□□□□ -1.8
TCA17YEL048C SMF1P38925 575 aa3.8□□□□□ -1.8
TCA17YEL048C ESL1P40456 1118 aa3.8□□□□□ -1.8
TCA17YEL048C MNP1P53163 194 aaPredicted RBP3.8□□□□□ -1.8
TCA17YEL048C FRE4P53746 719 aa3.8□□□□□ -1.8
TCA17YEL048C PEX25Q02969 394 aa3.8□□□□□ -1.8
TCA17YEL048C YMR181CQ03231 154 aa3.8□□□□□ -1.8
TCA17YEL048C VTA1Q06263 330 aa3.8□□□□□ -1.8
TCA17YEL048C RBD2Q12270 262 aa3.8□□□□□ -1.8
TCA17YEL048C GRX6Q12438 231 aa3.8□□□□□ -1.8
TCA17YEL048C ARG4P04076 463 aaPredicted RBP3.79□□□□□ -1.8
TCA17YEL048C MET17P06106 444 aa3.79□□□□□ -1.8
TCA17YEL048C MNS1P32906 549 aa3.79□□□□□ -1.8
TCA17YEL048C YHR054CP38780 354 aa3.79□□□□□ -1.8
TCA17YEL048C VMA13P41807 478 aaKnown RBP3.79□□□□□ -1.8
TCA17YEL048C KTR5P53966 522 aaPredicted RBP3.79□□□□□ -1.8
TCA17YEL048C YMR027WQ04371 470 aa3.79□□□□□ -1.8
TCA17YEL048C TEF1P02994 458 aaKnown RBP3.78□□□□□ -1.8
TCA17YEL048C CKA1P15790 372 aa3.78□□□□□ -1.8
TCA17YEL048C SLY1P22213 666 aa3.78□□□□□ -1.8
TCA17YEL048C SPR1P32603 445 aa3.78□□□□□ -1.8
TCA17YEL048C LYS1P38998 373 aaRIP-Chip data3.78□□□□□ -1.8 RIP-Chip
TCA17YEL048C TIS11P47977 285 aa3.78□□□□□ -1.8
TCA17YEL048C YLR152CP54072 576 aa3.78□□□□□ -1.8
TCA17YEL048C HXT11P54862 567 aa3.78□□□□□ -1.8
TCA17YEL048C REX4Q08237 289 aa3.78□□□□□ -1.8
TCA17YEL048C SGT1Q08446 395 aa3.78□□□□□ -1.8
TCA17YEL048C BUD21Q08492 214 aaPredicted RBP3.78□□□□□ -1.8
TCA17YEL048C SNX3Q08826 162 aaKnown RBP3.78□□□□□ -1.8
TCA17YEL048C RIP1P08067 215 aa3.77□□□□□ -1.81
TCA17YEL048C HXT3P32466 567 aaKnown RBP3.77□□□□□ -1.81
TCA17YEL048C IRC6P43615 237 aa3.77□□□□□ -1.81
TCA17YEL048C SHY1P53266 389 aa3.77□□□□□ -1.81
TCA17YEL048C YNR048WP53740 393 aa3.77□□□□□ -1.81
TCA17YEL048C CWC25P53854 179 aaKnown RBP3.77□□□□□ -1.81
TCA17YEL048C MRPL19P53875 158 aa3.77□□□□□ -1.81
TCA17YEL048C WTM1Q12363 437 aaKnown RBP3.77□□□□□ -1.81
TCA17YEL048C ROX1P25042 368 aa3.76□□□□□ -1.81
TCA17YEL048C HCS1P34243 683 aa3.76□□□□□ -1.81
TCA17YEL048C ARA1P38115 344 aa3.76□□□□□ -1.81
TCA17YEL048C FMS1P50264 508 aa3.76□□□□□ -1.81
TCA17YEL048C ITR1P30605 584 aa3.75□□□□□ -1.81
TCA17YEL048C MUD1P32605 298 aaKnown RBP3.75□□□□□ -1.81
TCA17YEL048C KKQ8P36004 724 aa3.75□□□□□ -1.81
TCA17YEL048C MSG5P38590 489 aa3.75□□□□□ -1.81
TCA17YEL048C SAS2P40963 338 aa3.75□□□□□ -1.81
TCA17YEL048C HMS2P47175 358 aa3.75□□□□□ -1.81
TCA17YEL048C TSR2Q06672 205 aaKnown RBP3.75□□□□□ -1.81
TCA17YEL048C SIL1Q08199 421 aa3.75□□□□□ -1.81
TCA17YEL048C TRP1P00912 224 aa3.74□□□□□ -1.81
TCA17YEL048C LSB5P25369 354 aa3.74□□□□□ -1.81
TCA17YEL048C PRS1P32895 427 aaKnown RBP3.74□□□□□ -1.81
TCA17YEL048C DLD2P46681 530 aaKnown RBP3.74□□□□□ -1.81
TCA17YEL048C MTM1P53320 366 aa3.74□□□□□ -1.81
TCA17YEL048C RSN1Q03516 953 aa3.74□□□□□ -1.81
TCA17YEL048C BET5Q03630 159 aa3.74□□□□□ -1.81
TCA17YEL048C HSP42Q12329 375 aa3.74□□□□□ -1.81
TCA17YEL048C RPS8AP0CX39 200 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms