RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W RRN11Q04712 507 aa3.41□□□□□ -1.86
RPN9YDR427W SIL1Q08199 421 aa3.41□□□□□ -1.86
RPN9YDR427W RRP12Q12754 1228 aaKnown RBP3.41□□□□□ -1.86
RPN9YDR427W YLR278CQ05854 1341 aa3.41□□□□□ -1.86
RPN9YDR427W HCS1P34243 683 aa3.4□□□□□ -1.87
RPN9YDR427W NAT2P37293 288 aa3.4□□□□□ -1.87
RPN9YDR427W MST28P39552 234 aa3.4□□□□□ -1.87
RPN9YDR427W SAS2P40963 338 aa3.4□□□□□ -1.87
RPN9YDR427W FMS1P50264 508 aa3.4□□□□□ -1.87
RPN9YDR427W MNP1P53163 194 aaPredicted RBP3.4□□□□□ -1.87
RPN9YDR427W PCP1P53259 346 aa3.4□□□□□ -1.87
RPN9YDR427W DSL1P53847 754 aa3.4□□□□□ -1.87
RPN9YDR427W YDR387CQ04162 555 aa3.4□□□□□ -1.87
RPN9YDR427W YOR387CQ08910 206 aa3.4□□□□□ -1.87
RPN9YDR427W YPL199CQ08954 240 aa3.4□□□□□ -1.87
RPN9YDR427W CLB3P24870 427 aa3.39□□□□□ -1.87
RPN9YDR427W TIP1P27654 210 aaPredicted RBP3.39□□□□□ -1.87
RPN9YDR427W SIN4P32259 974 aa3.39□□□□□ -1.87
RPN9YDR427W VHC1P38329 1120 aa3.39□□□□□ -1.87
RPN9YDR427W YIL067CP40514 678 aa3.39□□□□□ -1.87
RPN9YDR427W ECM27P47144 725 aa3.39□□□□□ -1.87
RPN9YDR427W ELP3Q02908 557 aaKnown RBP3.39□□□□□ -1.87
RPN9YDR427W ADD37Q03233 198 aa3.39□□□□□ -1.87
RPN9YDR427W MDM30Q05930 598 aa3.39□□□□□ -1.87
RPN9YDR427W ESA1Q08649 445 aa3.39□□□□□ -1.87
RPN9YDR427W ISN1Q99312 450 aa3.39□□□□□ -1.87
RPN9YDR427W RAD61Q99359 647 aa3.39□□□□□ -1.87
RPN9YDR427W HIS4P00815 799 aaKnown RBP3.38□□□□□ -1.87
RPN9YDR427W SAM1P10659 382 aaKnown RBP3.38□□□□□ -1.87
RPN9YDR427W SAM2P19358 384 aaKnown RBP3.38□□□□□ -1.87
RPN9YDR427W KRE2P27809 442 aa3.38□□□□□ -1.87
RPN9YDR427W ITR1P30605 584 aa3.38□□□□□ -1.87
RPN9YDR427W JNM1P36224 373 aa3.38□□□□□ -1.87
RPN9YDR427W PIM1P36775 1133 aa3.38□□□□□ -1.87
RPN9YDR427W REE1P40893 198 aa3.38□□□□□ -1.87
RPN9YDR427W OST1P41543 476 aaKnown RBP3.38□□□□□ -1.87
RPN9YDR427W YJR011CP47086 261 aaPredicted RBP3.38□□□□□ -1.87
RPN9YDR427W SSN8P47821 323 aa3.38□□□□□ -1.87
RPN9YDR427W BTN2P53286 410 aa3.38□□□□□ -1.87
RPN9YDR427W ARX1Q03862 593 aaKnown RBP3.38□□□□□ -1.87
RPN9YDR427W PBA1Q05778 276 aa3.38□□□□□ -1.87
RPN9YDR427W MUM3Q08750 479 aa3.38□□□□□ -1.87
RPN9YDR427W RKM1Q08961 583 aaPredicted RBP3.38□□□□□ -1.87
RPN9YDR427W CPR4P25334 318 aa3.37□□□□□ -1.87
RPN9YDR427W SPS22P25380 463 aa3.37□□□□□ -1.87
RPN9YDR427W NAM9P27929 486 aa3.37□□□□□ -1.87
RPN9YDR427W APE2P32454 952 aaKnown RBP3.37□□□□□ -1.87
RPN9YDR427W YBL059WP34224 193 aa3.37□□□□□ -1.87
RPN9YDR427W SWH1P35845 1188 aa3.37□□□□□ -1.87
RPN9YDR427W COS5P47187 383 aa3.37□□□□□ -1.87
RPN9YDR427W GOR1P53839 350 aa3.37□□□□□ -1.87
RPN9YDR427W YIF1P53845 314 aaKnown RBP3.37□□□□□ -1.87
RPN9YDR427W YMR155WQ03795 547 aa3.37□□□□□ -1.87
RPN9YDR427W COS7Q07788 383 aa3.37□□□□□ -1.87
RPN9YDR427W TIM18Q08749 192 aa3.37□□□□□ -1.87
RPN9YDR427W TMS1Q12116 473 aa3.37□□□□□ -1.87
RPN9YDR427W YPR022CQ12139 1133 aa3.37□□□□□ -1.87
RPN9YDR427W PKH2Q12236 1081 aaKnown RBP3.37□□□□□ -1.87
RPN9YDR427W YLR108CQ12259 485 aa3.37□□□□□ -1.87
RPN9YDR427W ORT1Q12375 292 aa3.37□□□□□ -1.87
RPN9YDR427W HHF1P02309 103 aaKnown RBP3.36□□□□□ -1.87
RPN9YDR427W DEG1P31115 442 aaKnown RBP3.36□□□□□ -1.87
RPN9YDR427W YME2P32843 850 aa3.36□□□□□ -1.87
RPN9YDR427W SDH3P33421 198 aa3.36□□□□□ -1.87
RPN9YDR427W PAD1P33751 242 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
RPN9YDR427W MRPL4P36517 319 aa3.36□□□□□ -1.87
RPN9YDR427W LYS1P38998 373 aaRIP-Chip data3.36□□□□□ -1.87not detected
RPN9YDR427W GPD2P41911 440 aaKnown RBP3.36□□□□□ -1.87
RPN9YDR427W YFL067WP43537 175 aa3.36□□□□□ -1.87
RPN9YDR427W YNR048WP53740 393 aa3.36□□□□□ -1.87
RPN9YDR427W HXT11P54862 567 aa3.36□□□□□ -1.87
RPN9YDR427W RRP45Q05636 305 aaKnown RBP3.36□□□□□ -1.87
RPN9YDR427W VAM3Q12241 283 aa3.36□□□□□ -1.87
RPN9YDR427W HSP42Q12329 375 aa3.36□□□□□ -1.87
RPN9YDR427W SUP35P05453 685 aaKnown RBP3.35□□□□□ -1.87
RPN9YDR427W RPI1P23250 407 aaKnown RBP3.35□□□□□ -1.87
RPN9YDR427W CTR86P25355 563 aa3.35□□□□□ -1.87
RPN9YDR427W ARO2P28777 376 aaKnown RBP3.35□□□□□ -1.87
RPN9YDR427W STB6P36085 766 aa3.35□□□□□ -1.87
RPN9YDR427W ARA1P38115 344 aa3.35□□□□□ -1.87
RPN9YDR427W RIB5P38145 238 aa3.35□□□□□ -1.87
RPN9YDR427W YBR137WP38276 179 aa3.35□□□□□ -1.87
RPN9YDR427W YHR054CP38780 354 aa3.35□□□□□ -1.87
RPN9YDR427W NDT80P38830 627 aa3.35□□□□□ -1.87
RPN9YDR427W YGR210CP42942 411 aa3.35□□□□□ -1.87
RPN9YDR427W RPS0BP46654 252 aaKnown RBP3.35□□□□□ -1.87
RPN9YDR427W FRE4P53746 719 aa3.35□□□□□ -1.87
RPN9YDR427W TOF1P53840 1238 aa3.35□□□□□ -1.87
RPN9YDR427W SKO1Q02100 647 aa3.35□□□□□ -1.87
RPN9YDR427W YMR181CQ03231 154 aa3.35□□□□□ -1.87
RPN9YDR427W YDR131CQ03899 556 aa3.35□□□□□ -1.87
RPN9YDR427W HEL2Q05580 639 aaKnown RBP3.35□□□□□ -1.87
RPN9YDR427W MRPL35Q06678 367 aa3.35□□□□□ -1.87
RPN9YDR427W RRG1Q12167 365 aaPredicted RBP3.35□□□□□ -1.87
RPN9YDR427W RMD5Q12508 421 aa3.35□□□□□ -1.87
RPN9YDR427W YCR051WP25631 222 aa3.34□□□□□ -1.87
RPN9YDR427W HIR2P32480 875 aa3.34□□□□□ -1.87
RPN9YDR427W BYE1P36106 594 aa3.34□□□□□ -1.87
RPN9YDR427W NTC20P38302 140 aaPredicted RBP3.34□□□□□ -1.87
RPN9YDR427W NOC2P39744 710 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 140.6 ms