RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C YLR462WO13556 202 aa3.28□□□□□ -1.88
CDC40YDR364C TPK2P06245 380 aa3.28□□□□□ -1.88
CDC40YDR364C CPR2P23285 205 aa3.28□□□□□ -1.88
CDC40YDR364C SYN8P31377 255 aa3.28□□□□□ -1.88
CDC40YDR364C LOT5P34234 306 aa3.28□□□□□ -1.88
CDC40YDR364C SWH1P35845 1188 aa3.28□□□□□ -1.88
CDC40YDR364C TCD2P36101 447 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C HEL1P36113 551 aa3.28□□□□□ -1.88
CDC40YDR364C UIP5P36137 443 aa3.28□□□□□ -1.88
CDC40YDR364C RPF2P36160 344 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C MNN2P38069 597 aa3.28□□□□□ -1.88
CDC40YDR364C OLA1P38219 394 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C TIF5P38431 405 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C YHL049CP38722 271 aa3.28□□□□□ -1.88
CDC40YDR364C CCT6P39079 546 aa3.28□□□□□ -1.88
CDC40YDR364C YEL075CP39972 122 aa3.28□□□□□ -1.88
CDC40YDR364C ALD5P40047 520 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C LCP5P40079 357 aaPredicted RBP3.28□□□□□ -1.88
CDC40YDR364C YER186CP40101 306 aa3.28□□□□□ -1.88
CDC40YDR364C YER189WP40104 122 aa3.28□□□□□ -1.88
CDC40YDR364C HXT14P42833 540 aa3.28□□□□□ -1.88
CDC40YDR364C YFL064CP43540 174 aa3.28□□□□□ -1.88
CDC40YDR364C MDE1P47095 244 aa3.28□□□□□ -1.88
CDC40YDR364C TCB2P48231 1178 aa3.28□□□□□ -1.88
CDC40YDR364C IMD4P50094 524 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C HOP2P53187 214 aa3.28□□□□□ -1.88
CDC40YDR364C TWF1P53250 332 aa3.28□□□□□ -1.88
CDC40YDR364C DCP2P53550 970 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C NOP13P53883 403 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
CDC40YDR364C AAT1Q01802 451 aa3.28□□□□□ -1.88
CDC40YDR364C ADA2Q02336 434 aa3.28□□□□□ -1.88
CDC40YDR364C MZM1Q03429 123 aaPredicted RBP3.28□□□□□ -1.88
CDC40YDR364C SNU56Q03782 492 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C UFO1Q04511 668 aa3.28□□□□□ -1.88
CDC40YDR364C ERV41Q04651 352 aa3.28□□□□□ -1.88
CDC40YDR364C YML053CQ04978 212 aa3.28□□□□□ -1.88
CDC40YDR364C RQC1Q05468 723 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C APL5Q08951 932 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C TGS1Q12052 315 aa3.28□□□□□ -1.88
CDC40YDR364C REX3Q12090 404 aa3.28□□□□□ -1.88
CDC40YDR364C RIO1Q12196 484 aaKnown RBP3.28□□□□□ -1.88
CDC40YDR364C YBL111CQ3E7Y5 667 aa3.28□□□□□ -1.88
CDC40YDR364C JIP3O13555 125 aa3.27□□□□□ -1.89
CDC40YDR364C MF(ALPHA)1P01149 165 aa3.27□□□□□ -1.89
CDC40YDR364C HXK2P04807 486 aaKnown RBP3.27□□□□□ -1.89
CDC40YDR364C YML002WP0CF17 737 aa3.27□□□□□ -1.89
CDC40YDR364C POT1P27796 417 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
CDC40YDR364C SEC1P30619 724 aaKnown RBP3.27□□□□□ -1.89
CDC40YDR364C PDB1P32473 366 aaKnown RBP3.27□□□□□ -1.89
CDC40YDR364C GCG1P32656 232 aaKnown RBP3.27□□□□□ -1.89
CDC40YDR364C UBC6P33296 250 aaPredicted RBP3.27□□□□□ -1.89
CDC40YDR364C CSE2P33308 149 aa3.27□□□□□ -1.89
CDC40YDR364C YBL055CP34220 418 aaPredicted RBP3.27□□□□□ -1.89
CDC40YDR364C NTR2P36118 322 aaPredicted RBP3.27□□□□□ -1.89
CDC40YDR364C TVP23P38962 199 aa3.27□□□□□ -1.89
CDC40YDR364C END3P39013 349 aa3.27□□□□□ -1.89
CDC40YDR364C PKP1P40530 394 aa3.27□□□□□ -1.89
CDC40YDR364C SWP82P43554 623 aa3.27□□□□□ -1.89
CDC40YDR364C CAK1P43568 368 aaPredicted RBP3.27□□□□□ -1.89
CDC40YDR364C MIC19P43594 170 aa3.27□□□□□ -1.89
CDC40YDR364C RPS0BP46654 252 aaKnown RBP3.27□□□□□ -1.89
CDC40YDR364C DLD2P46681 530 aaKnown RBP3.27□□□□□ -1.89
CDC40YDR364C DIA3P52290 468 aa3.27□□□□□ -1.89
CDC40YDR364C UTP6Q02354 440 aaKnown RBP3.27□□□□□ -1.89
CDC40YDR364C KAP120Q02932 1032 aa3.27□□□□□ -1.89
CDC40YDR364C ARO80Q04052 950 aa3.27□□□□□ -1.89
CDC40YDR364C IVY1Q04934 453 aa3.27□□□□□ -1.89
CDC40YDR364C YDR278CQ05612 105 aa3.27□□□□□ -1.89
CDC40YDR364C ECI1Q05871 280 aa3.27□□□□□ -1.89
CDC40YDR364C CDD1Q06549 142 aa3.27□□□□□ -1.89
CDC40YDR364C NOP6Q07623 225 aaKnown RBP3.27□□□□□ -1.89
CDC40YDR364C YDL242WQ07746 117 aa3.27□□□□□ -1.89
CDC40YDR364C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
CDC40YDR364C DCI1Q08558 271 aa3.27□□□□□ -1.89
CDC40YDR364C VPS54Q12071 889 aa3.27□□□□□ -1.89
CDC40YDR364C BAG7Q12128 409 aa3.27□□□□□ -1.89
CDC40YDR364C RLM1Q12224 676 aa3.27□□□□□ -1.89
CDC40YDR364C RPN5Q12250 445 aaKnown RBP3.27□□□□□ -1.89
CDC40YDR364C BI2P03873 423 aa3.26□□□□□ -1.89
CDC40YDR364C CHS1P08004 1131 aa3.26□□□□□ -1.89
CDC40YDR364C SRV2P17555 526 aaKnown RBP3.26□□□□□ -1.89
CDC40YDR364C VPS3P23643 1011 aa3.26□□□□□ -1.89
CDC40YDR364C RSA4P25382 515 aaKnown RBP3.26□□□□□ -1.89
CDC40YDR364C LAC1P28496 418 aa3.26□□□□□ -1.89
CDC40YDR364C YME1P32795 747 aa3.26□□□□□ -1.89
CDC40YDR364C MRP4P32902 394 aa3.26□□□□□ -1.89
CDC40YDR364C SOF1P33750 489 aaKnown RBP3.26□□□□□ -1.89
CDC40YDR364C WBP1P33767 430 aaKnown RBP3.26□□□□□ -1.89
CDC40YDR364C HCS1P34243 683 aa3.26□□□□□ -1.89
CDC40YDR364C LHS1P36016 881 aa3.26□□□□□ -1.89
CDC40YDR364C SPP381P38282 291 aaPredicted RBP3.26□□□□□ -1.89
CDC40YDR364C PCA1P38360 1216 aa3.26□□□□□ -1.89
CDC40YDR364C MSG5P38590 489 aa3.26□□□□□ -1.89
CDC40YDR364C YHL026CP38740 315 aa3.26□□□□□ -1.89
CDC40YDR364C SAP1P39955 897 aaKnown RBP3.26□□□□□ -1.89
CDC40YDR364C ASG1P40467 964 aa3.26□□□□□ -1.89
CDC40YDR364C YNL320WP42840 284 aa3.26□□□□□ -1.89
CDC40YDR364C SNZ3P43545 298 aa3.26□□□□□ -1.89
CDC40YDR364C MND1P53102 219 aa3.26□□□□□ -1.89
CDC40YDR364C SNZ2P53824 298 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms