RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W MFT1P33441 392 aaKnown RBP2.61□□□□□ -1.99
SSF2YDR312W NDE1P40215 560 aa2.61□□□□□ -1.99
SSF2YDR312W YJL213WP40896 331 aa2.61□□□□□ -1.99
SSF2YDR312W YGR117CP53270 476 aa2.61□□□□□ -1.99
SSF2YDR312W GPI1P53306 609 aa2.61□□□□□ -1.99
SSF2YDR312W SLG1P54867 378 aa2.61□□□□□ -1.99
SSF2YDR312W IRC15Q02733 499 aa2.61□□□□□ -1.99
SSF2YDR312W PDS5Q04264 1277 aa2.61□□□□□ -1.99
SSF2YDR312W MRD1Q06106 887 aaKnown RBP2.61□□□□□ -1.99
SSF2YDR312W SEC39Q12745 709 aa2.61□□□□□ -1.99
SSF2YDR312W LPD1P09624 499 aaKnown RBP2.6□□□□□ -1.99
SSF2YDR312W RPL31BP0C2H9 113 aaKnown RBP2.6□□□□□ -1.99
SSF2YDR312W ATP11P32453 318 aa2.6□□□□□ -1.99
SSF2YDR312W PMT1P33775 817 aa2.6□□□□□ -1.99
SSF2YDR312W PMU1P36069 295 aa2.6□□□□□ -1.99
SSF2YDR312W NOC2P39744 710 aaKnown RBP2.6□□□□□ -1.99
SSF2YDR312W HAT2P39984 401 aa2.6□□□□□ -1.99
SSF2YDR312W SHO1P40073 367 aa2.6□□□□□ -1.99
SSF2YDR312W YMR147WP40218 223 aaKnown RBP2.6□□□□□ -1.99
SSF2YDR312W ESL1P40456 1118 aa2.6□□□□□ -1.99
SSF2YDR312W MET18P40469 1032 aa2.6□□□□□ -1.99
SSF2YDR312W ARF3P40994 183 aaRIP-Chip data2.6□□□□□ -1.99not detected
SSF2YDR312W BUD27P43573 796 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
SSF2YDR312W TWF1P53250 332 aa2.6□□□□□ -1.99
SSF2YDR312W KEL3Q08979 651 aaPredicted RBP2.6□□□□□ -1.99
SSF2YDR312W LSP1Q12230 341 aaKnown RBP2.6□□□□□ -1.99
SSF2YDR312W GRX6Q12438 231 aa2.6□□□□□ -1.99
SSF2YDR312W VPS13Q07878 3144 aa2.59□□□□□ -1.99
SSF2YDR312W SIR4P11978 1358 aa2.59□□□□□ -2
SSF2YDR312W MET17P06106 444 aa2.59□□□□□ -2
SSF2YDR312W CBS2P14905 389 aa2.59□□□□□ -2
SSF2YDR312W GPI10P30777 616 aa2.59□□□□□ -2
SSF2YDR312W AVT5P38176 459 aa2.59□□□□□ -2
SSF2YDR312W VID24P38263 362 aa2.59□□□□□ -2
SSF2YDR312W SYG1P40528 902 aa2.59□□□□□ -2
SSF2YDR312W IRC6P43615 237 aa2.59□□□□□ -2
SSF2YDR312W BOR1P53838 576 aa2.59□□□□□ -2
SSF2YDR312W JJJ1P53863 590 aa2.59□□□□□ -2
SSF2YDR312W TRM44Q02648 567 aaKnown RBP2.59□□□□□ -2
SSF2YDR312W SPC19Q03954 165 aa2.59□□□□□ -2
SSF2YDR312W TAP42Q04372 366 aa2.59□□□□□ -2
SSF2YDR312W SMA2Q04658 369 aa2.59□□□□□ -2
SSF2YDR312W VPS74Q06385 345 aa2.59□□□□□ -2
SSF2YDR312W RIM20Q12033 661 aa2.59□□□□□ -2
SSF2YDR312W ATG29Q12092 213 aa2.59□□□□□ -2
SSF2YDR312W TY4B-HP0C2J7 1802 aa2.58□□□□□ -2
SSF2YDR312W TY4B-JP47024 1803 aa2.58□□□□□ -2
SSF2YDR312W CDC31P06704 161 aaKnown RBP2.58□□□□□ -2
SSF2YDR312W HPR1P17629 752 aaKnown RBP2.58□□□□□ -2
SSF2YDR312W EXO70P19658 623 aa2.58□□□□□ -2
SSF2YDR312W NPL6P32832 435 aa2.58□□□□□ -2
SSF2YDR312W CMC1P36064 111 aa2.58□□□□□ -2
SSF2YDR312W ALG8P40351 577 aa2.58□□□□□ -2
SSF2YDR312W POP1P41812 875 aa2.58□□□□□ -2
SSF2YDR312W GWT1P47026 490 aa2.58□□□□□ -2
SSF2YDR312W WSC2P53832 503 aa2.58□□□□□ -2
SSF2YDR312W SFI1Q12369 946 aa2.58□□□□□ -2
SSF2YDR312W RRD2Q12461 358 aa2.58□□□□□ -2
SSF2YDR312W BRR1Q99177 341 aaPredicted RBP2.58□□□□□ -2
SSF2YDR312W YML133CQ03099 1374 aa2.57□□□□□ -2
SSF2YDR312W ATR1P13090 542 aa2.57□□□□□ -2
SSF2YDR312W CKA1P15790 372 aa2.57□□□□□ -2
SSF2YDR312W ROX1P25042 368 aa2.57□□□□□ -2
SSF2YDR312W BUB3P26449 341 aa2.57□□□□□ -2
SSF2YDR312W FUN19P28003 413 aaPredicted RBP2.57□□□□□ -2
SSF2YDR312W SEC66P33754 206 aa2.57□□□□□ -2
SSF2YDR312W TUL1P36096 758 aa2.57□□□□□ -2
SSF2YDR312W FAU1P40099 211 aa2.57□□□□□ -2
SSF2YDR312W HXT14P42833 540 aa2.57□□□□□ -2
SSF2YDR312W OCA1P50946 238 aaPredicted RBP2.57□□□□□ -2
SSF2YDR312W YGL108CP53139 140 aa2.57□□□□□ -2
SSF2YDR312W MRPL19P53875 158 aa2.57□□□□□ -2
SSF2YDR312W KTR5P53966 522 aaPredicted RBP2.57□□□□□ -2
SSF2YDR312W MDM1Q01846 1127 aa2.57□□□□□ -2
SSF2YDR312W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SSF2YDR312W YLL056CQ12177 298 aa2.57□□□□□ -2
SSF2YDR312W CTF3Q12748 733 aa2.57□□□□□ -2
SSF2YDR312W YDR034W-BQ6Q5X2 51 aa2.57□□□□□ -2
SSF2YDR312W INH1P01097 85 aa2.56□□□□□ -2
SSF2YDR312W RNA14P25298 677 aaKnown RBP2.56□□□□□ -2
SSF2YDR312W PUT3P25502 979 aaPredicted RBP2.56□□□□□ -2
SSF2YDR312W FRE2P36033 711 aa2.56□□□□□ -2
SSF2YDR312W THI2P38141 450 aa2.56□□□□□ -2
SSF2YDR312W PCA1P38360 1216 aa2.56□□□□□ -2
SSF2YDR312W TIF5P38431 405 aaKnown RBP2.56□□□□□ -2
SSF2YDR312W SMF1P38925 575 aa2.56□□□□□ -2
SSF2YDR312W VMA13P41807 478 aaKnown RBP2.56□□□□□ -2
SSF2YDR312W GCD10P41814 478 aa2.56□□□□□ -2
SSF2YDR312W IDP2P41939 412 aa2.56□□□□□ -2
SSF2YDR312W ELP2P42935 788 aa2.56□□□□□ -2
SSF2YDR312W YJL132WP47014 750 aa2.56□□□□□ -2
SSF2YDR312W ARK1P53974 638 aa2.56□□□□□ -2
SSF2YDR312W TAF11Q04226 346 aa2.56□□□□□ -2
SSF2YDR312W SCM3Q12334 223 aa2.56□□□□□ -2
SSF2YDR312W TAO3P40468 2376 aa2.55□□□□□ -2
SSF2YDR312W SPB1P25582 841 aaPredicted RBP2.55□□□□□ -2
SSF2YDR312W HSP104P31539 908 aaKnown RBP2.55□□□□□ -2
SSF2YDR312W AFG1P32317 509 aa2.55□□□□□ -2
SSF2YDR312W YHR131CP38835 850 aa2.55□□□□□ -2
SSF2YDR312W YPI1P43587 155 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms