RNA–Protein interactions for RNA: YDR066C

RTR2, Transcript of Protein of unknown function, yeast

Gene RTR2, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTR2	YDR066C	REE1	P40893	198 aa		2.39	□□□□□ -2.03
RTR2	YDR066C	SAS2	P40963	338 aa		2.39	□□□□□ -2.03
RTR2	YDR066C	ARF3	P40994	183 aa	RIP-Chip data	2.39	□□□□□ -2.03	not detected
RTR2	YDR066C	ARX1	Q03862	593 aa	Known RBP	2.39	□□□□□ -2.03
RTR2	YDR066C	RBD2	Q12270	262 aa		2.39	□□□□□ -2.03
RTR2	YDR066C	HRT3	Q12347	344 aa		2.39	□□□□□ -2.03
RTR2	YDR066C	SPS4	P09937	338 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	RPS8A	P0CX39	200 aa	Known RBP	2.38	□□□□□ -2.03
RTR2	YDR066C	RPS8B	P0CX40	200 aa	Known RBP	2.38	□□□□□ -2.03
RTR2	YDR066C	RED1	P14291	827 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	CRM1	P30822	1084 aa	Known RBP	2.38	□□□□□ -2.03
RTR2	YDR066C	DEG1	P31115	442 aa	Known RBP	2.38	□□□□□ -2.03
RTR2	YDR066C	YEL045C	P32616	141 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	CBP4	P37267	147 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	MSG5	P38590	489 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	PRM5	P40476	318 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	YFL067W	P43537	175 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	VTC2	P43585	828 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	NCA3	P46955	337 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	TIS11	P47977	285 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	SHE10	P53075	577 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	NCS2	P53923	493 aa	Predicted RBP	2.38	□□□□□ -2.03
RTR2	YDR066C	ADD37	Q03233	198 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	COG4	Q06096	861 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	TMC1	Q08422	150 aa	Predicted RBP	2.38	□□□□□ -2.03
RTR2	YDR066C	RAD61	Q99359	647 aa		2.38	□□□□□ -2.03
RTR2	YDR066C	RPI1	P23250	407 aa	Known RBP	2.37	□□□□□ -2.03
RTR2	YDR066C	APE2	P32454	952 aa	Known RBP	2.37	□□□□□ -2.03
RTR2	YDR066C	RML2	P32611	393 aa		2.37	□□□□□ -2.03
RTR2	YDR066C	UTP9	P38882	575 aa	Known RBP	2.37	□□□□□ -2.03
RTR2	YDR066C	FAA2	P39518	744 aa		2.37	□□□□□ -2.03
RTR2	YDR066C	SSU1	P41930	458 aa		2.37	□□□□□ -2.03
RTR2	YDR066C	YGR210C	P42942	411 aa		2.37	□□□□□ -2.03
RTR2	YDR066C	WWM1	P43582	211 aa	Known RBP	2.37	□□□□□ -2.03
RTR2	YDR066C	YGL242C	P53066	181 aa		2.37	□□□□□ -2.03
RTR2	YDR066C	RMD9	P53140	646 aa	Known RBP	2.37	□□□□□ -2.03
RTR2	YDR066C	IBD2	P53892	351 aa		2.37	□□□□□ -2.03
RTR2	YDR066C	HSP31	Q04432	237 aa		2.37	□□□□□ -2.03
RTR2	YDR066C	MHR1	Q06630	226 aa		2.37	□□□□□ -2.03
RTR2	YDR066C	RTP1	Q12751	981 aa		2.37	□□□□□ -2.03
RTR2	YDR066C	TRP1	P00912	224 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	HHF1	P02309	103 aa	Known RBP	2.36	□□□□□ -2.03
RTR2	YDR066C	CYC3	P06182	269 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	CDC31	P06704	161 aa	Known RBP	2.36	□□□□□ -2.03
RTR2	YDR066C	RAD57	P25301	460 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	SIN4	P32259	974 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	RPN12	P32496	274 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	SPR1	P32603	445 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	STB6	P36085	766 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	PIM1	P36775	1133 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	DED81	P38707	554 aa	Known RBP	2.36	□□□□□ -2.03
RTR2	YDR066C	GPD2	P41911	440 aa	Known RBP	2.36	□□□□□ -2.03
RTR2	YDR066C	LAM5	P43560	674 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	DLD2	P46681	530 aa	Known RBP	2.36	□□□□□ -2.03
RTR2	YDR066C	FRE4	P53746	719 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	YIF1	P53845	314 aa	Known RBP	2.36	□□□□□ -2.03
RTR2	YDR066C	RRG7	Q08774	242 aa	Predicted RBP	2.36	□□□□□ -2.03
RTR2	YDR066C	ORT1	Q12375	292 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	RMD5	Q12508	421 aa		2.36	□□□□□ -2.03
RTR2	YDR066C	GPH1	P06738	902 aa	Known RBP	2.35	□□□□□ -2.03
RTR2	YDR066C	SLY1	P22213	666 aa		2.35	□□□□□ -2.03
RTR2	YDR066C	GYP6	P32806	458 aa		2.35	□□□□□ -2.03
RTR2	YDR066C	RIB5	P38145	238 aa		2.35	□□□□□ -2.03
RTR2	YDR066C	VHC1	P38329	1120 aa		2.35	□□□□□ -2.03
RTR2	YDR066C	PTH1	P38876	190 aa	Known RBP	2.35	□□□□□ -2.03
RTR2	YDR066C	LSM5	P40089	93 aa	Known RBP	2.35	□□□□□ -2.03
RTR2	YDR066C	MTM1	P53320	366 aa		2.35	□□□□□ -2.03
RTR2	YDR066C	DSL1	P53847	754 aa		2.35	□□□□□ -2.03
RTR2	YDR066C	MDM1	Q01846	1127 aa		2.35	□□□□□ -2.03
RTR2	YDR066C	PPM1	Q04081	328 aa		2.35	□□□□□ -2.03
RTR2	YDR066C	TIM18	Q08749	192 aa		2.35	□□□□□ -2.03
RTR2	YDR066C	YLR108C	Q12259	485 aa		2.35	□□□□□ -2.03
RTR2	YDR066C	NFT1	P0CE68	1218 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	CTR86	P25355	563 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	KRE2	P27809	442 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	ARO2	P28777	376 aa	Known RBP	2.34	□□□□□ -2.03
RTR2	YDR066C	BEM1	P29366	551 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.34	□□□□□ -2.03	not detected
RTR2	YDR066C	SOR1	P35497	357 aa	Known RBP	2.34	□□□□□ -2.03
RTR2	YDR066C	PAN6	P40459	309 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	ECM27	P47144	725 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	MNP1	P53163	194 aa	Predicted RBP	2.34	□□□□□ -2.03
RTR2	YDR066C	BTN2	P53286	410 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	YNR048W	P53740	393 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	RRN11	Q04712	507 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	SOR2	Q07786	357 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	SNX3	Q08826	162 aa	Known RBP	2.34	□□□□□ -2.03
RTR2	YDR066C	FDH1	Q08911	376 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	PKH2	Q12236	1081 aa	Known RBP	2.34	□□□□□ -2.03
RTR2	YDR066C	VAM3	Q12241	283 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	AHC1	Q12433	566 aa		2.34	□□□□□ -2.03
RTR2	YDR066C	HIS4	P00815	799 aa	Known RBP	2.33	□□□□□ -2.04
RTR2	YDR066C	REC114	P32841	428 aa		2.33	□□□□□ -2.04
RTR2	YDR066C	ARA1	P38115	344 aa		2.33	□□□□□ -2.04
RTR2	YDR066C	OTU2	P38747	307 aa	Known RBP	2.33	□□□□□ -2.04
RTR2	YDR066C	YHR054C	P38780	354 aa		2.33	□□□□□ -2.04
RTR2	YDR066C	MTC6	P38849	526 aa		2.33	□□□□□ -2.04
RTR2	YDR066C	LYS1	P38998	373 aa	RIP-Chip data	2.33	□□□□□ -2.04	not detected
RTR2	YDR066C	RPS0B	P46654	252 aa	Known RBP	2.33	□□□□□ -2.04
RTR2	YDR066C	PHB2	P50085	310 aa		2.33	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms