RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	SSP120	P39931	234 aa	Known RBP	4.25	□□□□□ -1.73
SAF1	YBR280C	UBP6	P43593	499 aa	Known RBP	4.25	□□□□□ -1.73
SAF1	YBR280C	IRC6	P43615	237 aa		4.25	□□□□□ -1.73
SAF1	YBR280C	YJR141W	P47172	347 aa	Predicted RBP	4.25	□□□□□ -1.73
SAF1	YBR280C	INN1	P53901	409 aa		4.25	□□□□□ -1.73
SAF1	YBR280C	REC102	Q02721	264 aa		4.25	□□□□□ -1.73
SAF1	YBR280C	YMR209C	Q03648	457 aa		4.25	□□□□□ -1.73
SAF1	YBR280C	RQC1	Q05468	723 aa	Known RBP	4.25	□□□□□ -1.73
SAF1	YBR280C	MCM16	Q12262	181 aa		4.25	□□□□□ -1.73
SAF1	YBR280C	PRP46	Q12417	451 aa	Predicted RBP	4.25	□□□□□ -1.73
SAF1	YBR280C	PAR32	Q12515	295 aa	Known RBP	4.25	□□□□□ -1.73
SAF1	YBR280C	SPT3	P06844	337 aa		4.24	□□□□□ -1.73
SAF1	YBR280C	PBS2	P08018	668 aa		4.24	□□□□□ -1.73
SAF1	YBR280C	YSF3	P0C074	85 aa	Predicted RBP	4.24	□□□□□ -1.73
SAF1	YBR280C	PHO87	P25360	923 aa		4.24	□□□□□ -1.73
SAF1	YBR280C	YCR090C	P25654	182 aa	Known RBP	4.24	□□□□□ -1.73
SAF1	YBR280C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SAF1	YBR280C	PTH2	P34222	208 aa		4.24	□□□□□ -1.73
SAF1	YBR280C	RRP14	P36080	434 aa	Known RBP	4.24	□□□□□ -1.73
SAF1	YBR280C	TOK1	P40310	691 aa		4.24	□□□□□ -1.73
SAF1	YBR280C	MDV1	P47025	714 aa		4.24	□□□□□ -1.73
SAF1	YBR280C	RAD17	P48581	401 aa		4.24	□□□□□ -1.73
SAF1	YBR280C	PDR16	P53860	351 aa	Known RBP	4.24	□□□□□ -1.73
SAF1	YBR280C	YNL140C	P53910	189 aa		4.24	□□□□□ -1.73
SAF1	YBR280C	SKI8	Q02793	397 aa	Predicted RBP	4.24	□□□□□ -1.73
SAF1	YBR280C	MLH3	Q12083	715 aa		4.24	□□□□□ -1.73
SAF1	YBR280C	RIO1	Q12196	484 aa	Known RBP	4.24	□□□□□ -1.73
SAF1	YBR280C	MHT1	Q12525	324 aa		4.24	□□□□□ -1.73
SAF1	YBR280C	PRT1	P06103	763 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	ARD1	P07347	238 aa	Predicted RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	TY2A-LR1	P0C2J4	438 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	TY2A-F	P0CX61	438 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	TY2A-GR2	P0CX62	438 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	TY2A-C	P25383	438 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	VPS21	P36017	210 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
SAF1	YBR280C	YPT32	P51996	222 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	YGR053C	P53234	283 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	TY2A-DR2	Q03483	438 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	YMR155W	Q03795	547 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	TAF11	Q04226	346 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	RCN2	Q12044	265 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	TY2A-B	Q12260	438 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	TY2A-OR2	Q12293	438 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	TY2A-DR1	Q12392	438 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	TY2A-OR1	Q12439	438 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	AHA1	Q12449	350 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	TY2A-DR3	Q99303	438 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	MCM1	P11746	286 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	DAP2	P18962	818 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	IDH2	P28241	369 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	PHA2	P32452	334 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	RTG1	P32607	177 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	AUR1	P36107	401 aa	Predicted RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	YKR078W	P36158	585 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	VRP1	P37370	817 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	OLA1	P38219	394 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	YJL206C	P39529	758 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	AXL1	P40851	1208 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	CIN1	P40987	1014 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	MPS3	P47069	682 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	EMC2	P47133	292 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	UPF3	P48412	387 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	ALG12	P53730	551 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	RNY1	Q02933	434 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	CGI121	Q03705	181 aa	Known RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	NMD4	Q12129	218 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	RRP36	Q12481	300 aa	Predicted RBP	4.23	□□□□□ -1.73
SAF1	YBR280C	YCL012C	Q8J0M4	134 aa		4.23	□□□□□ -1.73
SAF1	YBR280C	RPS17A	P02407	136 aa	Known RBP	4.22	□□□□□ -1.73
SAF1	YBR280C	STE7	P06784	515 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	HMG1	P12683	1054 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	RPS17B	P14127	136 aa	Known RBP	4.22	□□□□□ -1.73
SAF1	YBR280C	GPI12	P23797	304 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	ERG8	P24521	451 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	PTC6	P25646	442 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	COX13	P32799	129 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	PTR2	P32901	601 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	BYE1	P36106	594 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	YBR062C	P38239	180 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	UTP9	P38882	575 aa	Known RBP	4.22	□□□□□ -1.73
SAF1	YBR280C	PEP8	P40335	379 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	YIL001W	P40560	513 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	GCD10	P41814	478 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	ALB1	P47019	175 aa	Predicted RBP	4.22	□□□□□ -1.73
SAF1	YBR280C	YJL043W	P47053	257 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	AIF1	P52923	378 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	ZIP2	P53061	704 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	SDH1	Q00711	640 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	YPL109C	Q02981	657 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	MSC1	Q03104	513 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	PNP1	Q05788	311 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	ISR1	Q06098	443 aa	Known RBP	4.22	□□□□□ -1.73
SAF1	YBR280C	SEC10	Q06245	871 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	YEH1	Q07804	573 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	ESA1	Q08649	445 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	YOR019W	Q99248	730 aa		4.22	□□□□□ -1.73
SAF1	YBR280C	SLH1	P53327	1967 aa	Known RBP	4.22	□□□□□ -1.73
SAF1	YBR280C	SRV2	P17555	526 aa	Known RBP	4.21	□□□□□ -1.74
SAF1	YBR280C	ART10	P18634	518 aa	Known RBP	4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms