RNA–Protein interactions for RNA: ENST00000373544.5

RABEPK-203, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 2,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-203ENST00000373544 VPS16Q9H269 839 aa13.53□□□□□ -0.24
RABEPK-203ENST00000373544 MAGEF1Q9HAY2 307 aa13.53□□□□□ -0.24
RABEPK-203ENST00000373544 DDX39AO00148 427 aaKnown RBP13.53□□□□□ -0.24
RABEPK-203ENST00000373544 MYL1P05976 194 aa13.53□□□□□ -0.24
RABEPK-203ENST00000373544 SFPQP23246 707 aaKnown RBP eCLIP13.53□□□□□ -0.24
RABEPK-203ENST00000373544 PABPC4Q13310 644 aaKnown RBP eCLIP13.53□□□□□ -0.24
RABEPK-203ENST00000373544 MOB2Q70IA6 237 aa13.53□□□□□ -0.24
RABEPK-203ENST00000373544 TRIM47Q96LD4 638 aa13.53□□□□□ -0.24
RABEPK-203ENST00000373544 FGFBP2Q9BYJ0 223 aa13.53□□□□□ -0.24
RABEPK-203ENST00000373544 VAV3Q9UKW4 847 aa13.53□□□□□ -0.24
RABEPK-203ENST00000373544 CTDP1Q9Y5B0 961 aaPredicted RBP13.53□□□□□ -0.24
RABEPK-203ENST00000373544 NKRFO15226 690 aaKnown RBP eCLIP13.52□□□□□ -0.24
RABEPK-203ENST00000373544 USP2O75604 605 aaPredicted RBP13.52□□□□□ -0.24
RABEPK-203ENST00000373544 OFD1O75665 1012 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 CYP3A4P08684 503 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 PLA2G4BP0C869 781 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 SPATA31C1P0DKV0 1188 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 ERCC3P19447 782 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 ADKP55263 362 aaKnown RBP13.52□□□□□ -0.24
RABEPK-203ENST00000373544 NR1I3Q14994 352 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 KRT31Q15323 416 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 NSMFQ6X4W1 530 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 IRF2BP1Q8IU81 584 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 BCAS3Q9H6U6 928 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 TRMT1Q9NXH9 659 aaKnown RBP13.52□□□□□ -0.24
RABEPK-203ENST00000373544 IMPACTQ9P2X3 320 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 R3HCC1Q9Y3T6 440 aaKnown RBP13.52□□□□□ -0.24
RABEPK-203ENST00000373544 PCNTO95613 3336 aa13.52□□□□□ -0.24
RABEPK-203ENST00000373544 A0A1B0GTH6 734 aa13.52□□□□□ -0.25
RABEPK-203ENST00000373544 VWA5AO00534 786 aa13.52□□□□□ -0.25
RABEPK-203ENST00000373544 PSMA7O14818 248 aa13.52□□□□□ -0.25
RABEPK-203ENST00000373544 ZBTB39O15060 712 aa13.52□□□□□ -0.25
RABEPK-203ENST00000373544 EIF2AK2P19525 551 aaKnown RBP13.52□□□□□ -0.25
RABEPK-203ENST00000373544 TRAF1Q13077 416 aa13.52□□□□□ -0.25
RABEPK-203ENST00000373544 CTTNQ14247 550 aaKnown RBP13.52□□□□□ -0.25
RABEPK-203ENST00000373544 CEP55Q53EZ4 464 aa13.52□□□□□ -0.25
RABEPK-203ENST00000373544 ANKRD40Q6AI12 368 aa13.52□□□□□ -0.25
RABEPK-203ENST00000373544 GPBP1Q86WP2 473 aa13.52□□□□□ -0.25
RABEPK-203ENST00000373544 CPLX3Q8WVH0 158 aa13.52□□□□□ -0.25
RABEPK-203ENST00000373544 SRRTQ9BXP5 876 aaKnown RBP13.52□□□□□ -0.25
RABEPK-203ENST00000373544 ZHX3Q9H4I2 956 aa13.52□□□□□ -0.25
RABEPK-203ENST00000373544 KCNJ18B7U540 433 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 USP14P54578 494 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 GSDMDP57764 484 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 RPS6P62753 249 aaKnown RBP13.51□□□□□ -0.25
RABEPK-203ENST00000373544 VGLL4Q14135 290 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 KCNJ12Q14500 433 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 LRCH2Q5VUJ6 765 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 CEP135Q66GS9 1140 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 MCTP2Q6DN12 878 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.51□□□□□ -0.25
RABEPK-203ENST00000373544 DNAJC19Q96DA6 116 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 TAAR1Q96RJ0 339 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 AS3MTQ9HBK9 375 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 ADARB2Q9NS39 739 aaKnown RBP13.51□□□□□ -0.25
RABEPK-203ENST00000373544 ADD3Q9UEY8 706 aaKnown RBP13.51□□□□□ -0.25
RABEPK-203ENST00000373544 PES1O00541 588 aaKnown RBP13.51□□□□□ -0.25
RABEPK-203ENST00000373544 ITGB5P18084 799 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 HSD17B4P51659 736 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 STIM1Q13586 685 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 CT47A1Q5JQC4 288 aaPredicted RBP13.51□□□□□ -0.25
RABEPK-203ENST00000373544 TTI2Q6NXR4 508 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 UNC13DQ70J99 1090 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.51□□□□□ -0.25
RABEPK-203ENST00000373544 PIGOQ8TEQ8 1089 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 CCDC47Q96A33 483 aaKnown RBP13.51□□□□□ -0.25
RABEPK-203ENST00000373544 C16orf45Q96MC5 204 aaPredicted RBP13.51□□□□□ -0.25
RABEPK-203ENST00000373544 FAM20AQ96MK3 541 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 DUSP9Q99956 384 aaKnown RBP13.51□□□□□ -0.25
RABEPK-203ENST00000373544 WDR11Q9BZH6 1224 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 SPTLC3Q9NUV7 552 aa13.51□□□□□ -0.25
RABEPK-203ENST00000373544 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
RABEPK-203ENST00000373544 KDM3AQ9Y4C1 1321 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 TBX3O15119 743 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 SUPT20HL1Q3ZLR7 823 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 TCP11X2Q5H9J9 407 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 SPECC1LQ69YQ0 1117 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 SULF1Q8IWU6 871 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 SYTL5Q8TDW5 730 aaPredicted RBP13.5□□□□□ -0.25
RABEPK-203ENST00000373544 DCPSQ96C86 337 aaKnown RBP13.5□□□□□ -0.25
RABEPK-203ENST00000373544 EIF2AK1Q9BQI3 630 aaKnown RBP13.5□□□□□ -0.25
RABEPK-203ENST00000373544 ZNF577Q9BSK1 485 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 NT5C3AQ9H0P0 336 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 SEMA6BQ9H3T3 888 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 N4BP3O15049 544 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 ZBED4O75132 1171 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 COASYQ13057 564 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 PLS1Q14651 629 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 ARSHQ5FYA8 562 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 HYIQ5T013 277 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 HAUS3Q68CZ6 603 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 SNRNP48Q6IEG0 339 aaKnown RBP13.5□□□□□ -0.25
RABEPK-203ENST00000373544 CNNM4Q6P4Q7 775 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 OTOP1Q7RTM1 612 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 TRMT1LQ7Z2T5 733 aaKnown RBP13.5□□□□□ -0.25
RABEPK-203ENST00000373544 KRT26Q7Z3Y9 468 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 TPH2Q8IWU9 490 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 CSGALNACT2Q8N6G5 542 aa13.5□□□□□ -0.25
RABEPK-203ENST00000373544 P2RX5Q93086 422 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms