RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W MIA40P36046 403 aa2.29□□□□□ -2.04
VPS16YPL045W MMS4P38257 691 aa2.29□□□□□ -2.04
VPS16YPL045W ERV46P39727 415 aa2.29□□□□□ -2.04
VPS16YPL045W YFR016CP43597 1233 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W PYK2P52489 506 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W YGR126WP53274 230 aa2.29□□□□□ -2.04
VPS16YPL045W YNL143CP53908 130 aa2.29□□□□□ -2.04
VPS16YPL045W OCA2P53949 197 aa2.29□□□□□ -2.04
VPS16YPL045W HEF3P53978 1044 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W VTC3Q02725 835 aa2.29□□□□□ -2.04
VPS16YPL045W GIS1Q03833 894 aa2.29□□□□□ -2.04
VPS16YPL045W DCS1Q06151 350 aa2.29□□□□□ -2.04
VPS16YPL045W HBT1Q07653 1046 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W DIS3Q08162 1001 aaKnown RBP2.29□□□□□ -2.04
VPS16YPL045W YLR049CQ12110 428 aa2.29□□□□□ -2.04
VPS16YPL045W GCN2P15442 1659 aa2.28□□□□□ -2.04
VPS16YPL045W GPH1P06738 902 aaKnown RBP2.28□□□□□ -2.04
VPS16YPL045W RHO2P06781 192 aa2.28□□□□□ -2.04
VPS16YPL045W RIP1P08067 215 aa2.28□□□□□ -2.04
VPS16YPL045W DAL80P26343 269 aa2.28□□□□□ -2.04
VPS16YPL045W MCM4P30665 933 aaKnown RBP2.28□□□□□ -2.04
VPS16YPL045W EMP70P32802 667 aa2.28□□□□□ -2.04
VPS16YPL045W TRM2P33753 639 aa2.28□□□□□ -2.04
VPS16YPL045W ALK1P43633 760 aaKnown RBP2.28□□□□□ -2.04
VPS16YPL045W IMD3P50095 523 aaKnown RBP2.28□□□□□ -2.04
VPS16YPL045W DRN1P53255 507 aaKnown RBP2.28□□□□□ -2.04
VPS16YPL045W RBA50Q04418 439 aa2.28□□□□□ -2.04
VPS16YPL045W ATG26Q06321 1198 aa2.28□□□□□ -2.04
VPS16YPL045W YFH1Q07540 174 aa2.28□□□□□ -2.04
VPS16YPL045W SUT2Q12286 268 aa2.28□□□□□ -2.04
VPS16YPL045W RRD2Q12461 358 aa2.28□□□□□ -2.04
VPS16YPL045W GLT1Q12680 2145 aaKnown RBP2.28□□□□□ -2.04
VPS16YPL045W NUP188P52593 1655 aaKnown RBP2.28□□□□□ -2.04
VPS16YPL045W CAR1P00812 333 aaKnown RBP2.28□□□□□ -2.05
VPS16YPL045W OM45P16547 393 aa2.28□□□□□ -2.05
VPS16YPL045W CNA1P23287 553 aa2.28□□□□□ -2.05
VPS16YPL045W RIM1P32445 135 aaKnown RBP2.28□□□□□ -2.05
VPS16YPL045W SSE1P32589 693 aaKnown RBP2.28□□□□□ -2.05
VPS16YPL045W SHP1P34223 423 aa2.28□□□□□ -2.05
VPS16YPL045W TCM62P38228 572 aaKnown RBP2.28□□□□□ -2.05
VPS16YPL045W VHC1P38329 1120 aa2.28□□□□□ -2.05
VPS16YPL045W UBA4P38820 440 aa2.28□□□□□ -2.05
VPS16YPL045W ELP2P42935 788 aa2.28□□□□□ -2.05
VPS16YPL045W LYS20P48570 428 aaKnown RBP2.28□□□□□ -2.05
VPS16YPL045W COP1P53622 1201 aaKnown RBP2.28□□□□□ -2.05
VPS16YPL045W ABZ2Q03266 374 aa2.28□□□□□ -2.05
VPS16YPL045W MDM30Q05930 598 aa2.28□□□□□ -2.05
VPS16YPL045W PHO92Q06390 306 aa2.28□□□□□ -2.05
VPS16YPL045W NDL1Q06568 189 aa2.28□□□□□ -2.05
VPS16YPL045W THP1Q08231 455 aa2.28□□□□□ -2.05
VPS16YPL045W YOR389WQ08912 624 aa2.28□□□□□ -2.05
VPS16YPL045W RKM1Q08961 583 aaPredicted RBP2.28□□□□□ -2.05
VPS16YPL045W ACF2Q12168 779 aa2.28□□□□□ -2.05
VPS16YPL045W NBL1Q3E7Y6 73 aa2.28□□□□□ -2.05
VPS16YPL045W RAV1P47104 1357 aa2.27□□□□□ -2.05
VPS16YPL045W YSP2Q06681 1438 aa2.27□□□□□ -2.05
VPS16YPL045W COX3P00420 269 aa2.27□□□□□ -2.05
VPS16YPL045W STE3P06783 470 aa2.27□□□□□ -2.05
VPS16YPL045W NUP1P20676 1076 aa2.27□□□□□ -2.05
VPS16YPL045W SGV1P23293 657 aaKnown RBP2.27□□□□□ -2.05
VPS16YPL045W KRE2P27809 442 aa2.27□□□□□ -2.05
VPS16YPL045W BEM1P29366 551 aa2.27□□□□□ -2.05
VPS16YPL045W SIN4P32259 974 aa2.27□□□□□ -2.05
VPS16YPL045W YMC1P32331 307 aa2.27□□□□□ -2.05
VPS16YPL045W PCA1P38360 1216 aa2.27□□□□□ -2.05
VPS16YPL045W RFC3P38629 340 aa2.27□□□□□ -2.05
VPS16YPL045W YHR210CP38893 341 aa2.27□□□□□ -2.05
VPS16YPL045W STB4P50104 949 aa2.27□□□□□ -2.05
VPS16YPL045W ASI1P54074 624 aa2.27□□□□□ -2.05
VPS16YPL045W POS5Q06892 414 aa2.27□□□□□ -2.05
VPS16YPL045W SFG1Q12507 346 aa2.27□□□□□ -2.05
VPS16YPL045W SRB8P25648 1427 aa2.27□□□□□ -2.05
VPS16YPL045W BI2P03873 423 aa2.27□□□□□ -2.05
VPS16YPL045W PDE2P06776 526 aa2.27□□□□□ -2.05
VPS16YPL045W RAD52P06778 471 aaKnown RBP2.27□□□□□ -2.05
VPS16YPL045W AQY1P0CD91 305 aa2.27□□□□□ -2.05
VPS16YPL045W SNF3P10870 884 aa2.27□□□□□ -2.05
VPS16YPL045W SCH9P11792 824 aaKnown RBP2.27□□□□□ -2.05
VPS16YPL045W SEC63P14906 663 aa2.27□□□□□ -2.05
VPS16YPL045W ALG1P16661 449 aa2.27□□□□□ -2.05
VPS16YPL045W ATP10P18496 279 aa2.27□□□□□ -2.05
VPS16YPL045W RHB1P25378 209 aa2.27□□□□□ -2.05
VPS16YPL045W NDI1P32340 513 aa2.27□□□□□ -2.05
VPS16YPL045W PRP21P32524 280 aaPredicted RBP2.27□□□□□ -2.05
VPS16YPL045W RRP1P35178 278 aaPredicted RBP2.27□□□□□ -2.05
VPS16YPL045W BNA4P38169 460 aa2.27□□□□□ -2.05
VPS16YPL045W CIN1P40987 1014 aa2.27□□□□□ -2.05
VPS16YPL045W SNG1P46950 547 aa2.27□□□□□ -2.05
VPS16YPL045W YIP5P53108 310 aa2.27□□□□□ -2.05
VPS16YPL045W ZPR1P53303 486 aaKnown RBP2.27□□□□□ -2.05
VPS16YPL045W ALF1P53904 254 aa2.27□□□□□ -2.05
VPS16YPL045W UTP6Q02354 440 aaKnown RBP2.27□□□□□ -2.05
VPS16YPL045W HAP1P0CE41 1502 aa2.26□□□□□ -2.05
VPS16YPL045W LEU4P06208 619 aaKnown RBP2.26□□□□□ -2.05
VPS16YPL045W HEM1P09950 548 aaPredicted RBP2.26□□□□□ -2.05
VPS16YPL045W PMR1P13586 950 aa2.26□□□□□ -2.05
VPS16YPL045W KIN3P22209 435 aa2.26□□□□□ -2.05
VPS16YPL045W GRR1P24814 1151 aa2.26□□□□□ -2.05
VPS16YPL045W RDS1P25611 832 aa2.26□□□□□ -2.05
VPS16YPL045W GSY2P27472 705 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms