RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C GPI1P53306 609 aa4.32□□□□□ -1.72
CDC42YLR229C NOP19P53317 196 aaPredicted RBP4.32□□□□□ -1.72
CDC42YLR229C NRD1P53617 575 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72 RIP-Chip
CDC42YLR229C YNL095CP53932 642 aa4.32□□□□□ -1.72
CDC42YLR229C IMP4P53941 290 aaKnown RBP4.32□□□□□ -1.72
CDC42YLR229C TIM11P81449 96 aaPredicted RBP4.32□□□□□ -1.72
CDC42YLR229C CEG1Q01159 459 aaPredicted RBP4.32□□□□□ -1.72
CDC42YLR229C SED5Q01590 340 aa4.32□□□□□ -1.72
CDC42YLR229C MET14Q02196 202 aa4.32□□□□□ -1.72
CDC42YLR229C YMR209CQ03648 457 aa4.32□□□□□ -1.72
CDC42YLR229C FIN1Q03898 291 aa4.32□□□□□ -1.72
CDC42YLR229C YDR132CQ03900 495 aa4.32□□□□□ -1.72
CDC42YLR229C GPI17Q04080 534 aa4.32□□□□□ -1.72
CDC42YLR229C SMP3Q04174 516 aa4.32□□□□□ -1.72
CDC42YLR229C CDA2Q06703 312 aa4.32□□□□□ -1.72
CDC42YLR229C SWC7Q06707 132 aa4.32□□□□□ -1.72
CDC42YLR229C LEA1Q08963 238 aaPredicted RBP4.32□□□□□ -1.72
CDC42YLR229C ULA1Q12059 462 aa4.32□□□□□ -1.72
CDC42YLR229C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
CDC42YLR229C NTO1Q12311 748 aa4.32□□□□□ -1.72
CDC42YLR229C APM4Q99186 491 aa4.32□□□□□ -1.72
CDC42YLR229C RHO2P06781 192 aa4.31□□□□□ -1.72
CDC42YLR229C ATP1P07251 545 aaKnown RBP4.31□□□□□ -1.72
CDC42YLR229C ATP12P22135 325 aa4.31□□□□□ -1.72
CDC42YLR229C CMK2P22517 447 aa4.31□□□□□ -1.72
CDC42YLR229C GDA1P32621 518 aa4.31□□□□□ -1.72
CDC42YLR229C CSE1P33307 960 aa4.31□□□□□ -1.72
CDC42YLR229C HCS1P34243 683 aa4.31□□□□□ -1.72
CDC42YLR229C TSA1P34760 196 aaKnown RBP4.31□□□□□ -1.72
CDC42YLR229C APT2P36973 181 aa4.31□□□□□ -1.72
CDC42YLR229C YBR241CP38142 488 aa4.31□□□□□ -1.72
CDC42YLR229C SIF2P38262 535 aa4.31□□□□□ -1.72
CDC42YLR229C YBR225WP38321 900 aa4.31□□□□□ -1.72
CDC42YLR229C VMA22P38784 181 aa4.31□□□□□ -1.72
CDC42YLR229C CYC2P38909 366 aa4.31□□□□□ -1.72
CDC42YLR229C YDR089WP38966 869 aa4.31□□□□□ -1.72
CDC42YLR229C SER3P40054 469 aa4.31□□□□□ -1.72
CDC42YLR229C ELO3P40319 345 aa4.31□□□□□ -1.72
CDC42YLR229C VHR1P40522 640 aa4.31□□□□□ -1.72
CDC42YLR229C PAC11P40960 533 aa4.31□□□□□ -1.72
CDC42YLR229C AGP3P43548 558 aa4.31□□□□□ -1.72
CDC42YLR229C CHA4P43634 648 aa4.31□□□□□ -1.72
CDC42YLR229C SNG1P46950 547 aa4.31□□□□□ -1.72
CDC42YLR229C RTT101P47050 842 aa4.31□□□□□ -1.72
CDC42YLR229C BIR1P47134 954 aa4.31□□□□□ -1.72
CDC42YLR229C UBC9P50623 157 aaPredicted RBP4.31□□□□□ -1.72
CDC42YLR229C BUD32P53323 261 aa4.31□□□□□ -1.72
CDC42YLR229C FMP30Q02883 468 aa4.31□□□□□ -1.72
CDC42YLR229C HSP31Q04432 237 aa4.31□□□□□ -1.72
CDC42YLR229C GAL83Q04739 417 aa4.31□□□□□ -1.72
CDC42YLR229C ECM22Q05958 814 aaPredicted RBP4.31□□□□□ -1.72
CDC42YLR229C TMA10Q06177 86 aa4.31□□□□□ -1.72
CDC42YLR229C YDL121CQ07541 149 aa4.31□□□□□ -1.72
CDC42YLR229C LOT6Q07923 191 aa4.31□□□□□ -1.72
CDC42YLR229C SLD7Q08457 257 aa4.31□□□□□ -1.72
CDC42YLR229C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
CDC42YLR229C YOR342CQ12182 319 aa4.31□□□□□ -1.72
CDC42YLR229C HTZ1Q12692 134 aaKnown RBP4.31□□□□□ -1.72
CDC42YLR229C YMR030W-AQ3E760 96 aa4.31□□□□□ -1.72
CDC42YLR229C AFI1Q99222 893 aa4.31□□□□□ -1.72
CDC42YLR229C MED11Q99278 115 aa4.31□□□□□ -1.72
CDC42YLR229C COX5AP00424 153 aa4.3□□□□□ -1.72
CDC42YLR229C RAP1P11938 827 aa4.3□□□□□ -1.72
CDC42YLR229C MRP13P12686 339 aa4.3□□□□□ -1.72
CDC42YLR229C MSS116P15424 664 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C HSP26P15992 214 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
CDC42YLR229C THR1P17423 357 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C RVS161P25343 265 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C RNQ1P25367 405 aa4.3□□□□□ -1.72
CDC42YLR229C DMC1P25453 334 aa4.3□□□□□ -1.72
CDC42YLR229C CRM1P30822 1084 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C CCR4P31384 837 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C UGP1P32861 499 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C TOM20P35180 183 aa4.3□□□□□ -1.72
CDC42YLR229C YKL063CP35725 167 aa4.3□□□□□ -1.72
CDC42YLR229C YKR051WP36142 418 aa4.3□□□□□ -1.72
CDC42YLR229C YBR285WP38354 144 aa4.3□□□□□ -1.72
CDC42YLR229C URA8P38627 578 aaPredicted RBP4.3□□□□□ -1.72
CDC42YLR229C YLF2P38746 405 aa4.3□□□□□ -1.72
CDC42YLR229C YHI9P38765 294 aa4.3□□□□□ -1.72
CDC42YLR229C ATG7P38862 630 aa4.3□□□□□ -1.72
CDC42YLR229C YHR182WP38870 785 aa4.3□□□□□ -1.72
CDC42YLR229C OPT1P40897 799 aa4.3□□□□□ -1.72
CDC42YLR229C RET2P43621 546 aa4.3□□□□□ -1.72
CDC42YLR229C DLD2P46681 530 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C ASN2P49090 572 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C GND2P53319 492 aa4.3□□□□□ -1.72
CDC42YLR229C CDC14Q00684 551 aa4.3□□□□□ -1.72
CDC42YLR229C RNY1Q02933 434 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C HPT1Q04178 221 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C YET2Q04210 160 aa4.3□□□□□ -1.72
CDC42YLR229C MRI1Q06489 411 aaKnown RBP4.3□□□□□ -1.72
CDC42YLR229C ASA1Q06822 443 aa4.3□□□□□ -1.72
CDC42YLR229C SYO1Q07395 620 aa4.3□□□□□ -1.72
CDC42YLR229C TRE2Q08693 809 aa4.3□□□□□ -1.72
CDC42YLR229C YPL191CQ08930 360 aa4.3□□□□□ -1.72
CDC42YLR229C YTM1Q12024 460 aaPredicted RBP4.3□□□□□ -1.72
CDC42YLR229C APC9Q12107 265 aa4.3□□□□□ -1.72
CDC42YLR229C LCB4Q12246 624 aa4.3□□□□□ -1.72
CDC42YLR229C ERG20P08524 352 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms