RNA–Protein interactions for RNA: YLR200W

YKE2, Transcript of Subunit of the heterohexameric Gim/prefoldin protein complex, yeast

Gene YKE2, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKE2	YLR200W	BNI5	P53890	448 aa	Known RBP	3	□□□□□ -1.93
YKE2	YLR200W	SKO1	Q02100	647 aa		3	□□□□□ -1.93
YKE2	YLR200W	RLI1	Q03195	608 aa	Known RBP	3	□□□□□ -1.93
YKE2	YLR200W	ROY1	Q04847	553 aa		3	□□□□□ -1.93
YKE2	YLR200W	COS7	Q07788	383 aa		3	□□□□□ -1.93
YKE2	YLR200W	DAP1	Q12091	152 aa		3	□□□□□ -1.93
YKE2	YLR200W	ISA2	Q12425	185 aa		3	□□□□□ -1.93
YKE2	YLR200W	RRD2	Q12461	358 aa		3	□□□□□ -1.93
YKE2	YLR200W	ATR1	P13090	542 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	KRE2	P27809	442 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	FUN19	P28003	413 aa	Predicted RBP	2.99	□□□□□ -1.93
YKE2	YLR200W	URA7	P28274	579 aa	Known RBP	2.99	□□□□□ -1.93
YKE2	YLR200W	VMA8	P32610	256 aa	Known RBP	2.99	□□□□□ -1.93
YKE2	YLR200W	GCS1	P35197	352 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	THI2	P38141	450 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	VHC1	P38329	1120 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	CCT2	P39076	527 aa	Known RBP	2.99	□□□□□ -1.93
YKE2	YLR200W	YAT2	P40017	923 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	CAK1	P43568	368 aa	Predicted RBP	2.99	□□□□□ -1.93
YKE2	YLR200W	GWT1	P47026	490 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	RTT101	P47050	842 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	YGL138C	P53122	345 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	OGG1	P53397	376 aa	Predicted RBP	2.99	□□□□□ -1.93
YKE2	YLR200W	CRZ1	P53968	678 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	SIL1	Q08199	421 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	MED2	Q12124	431 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	RKM5	Q12367	367 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	AFI1	Q99222	893 aa		2.99	□□□□□ -1.93
YKE2	YLR200W	YLR278C	Q05854	1341 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	RPL15A	P05748	204 aa	Known RBP	2.98	□□□□□ -1.93
YKE2	YLR200W	YML002W	P0CF17	737 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	CRM1	P30822	1084 aa	Known RBP	2.98	□□□□□ -1.93
YKE2	YLR200W	SPC110	P32380	944 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	PRP21	P32524	280 aa	Predicted RBP	2.98	□□□□□ -1.93
YKE2	YLR200W	TFB1	P32776	642 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	RSM22	P36056	628 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	MDM31	P38880	579 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	SHO1	P40073	367 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	ALG8	P40351	577 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	DSL1	P53847	754 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	HSP31	Q04432	237 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	YMR317W	Q04893	1140 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	YLR345W	Q06137	509 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	VAM3	Q12241	283 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	SMC6	Q12749	1114 aa		2.98	□□□□□ -1.93
YKE2	YLR200W	HIS4	P00815	799 aa	Known RBP	2.97	□□□□□ -1.93
YKE2	YLR200W	CPR2	P23285	205 aa		2.97	□□□□□ -1.93
YKE2	YLR200W	SIN4	P32259	974 aa		2.97	□□□□□ -1.93
YKE2	YLR200W	DHH1	P39517	506 aa	Known RBP	2.97	□□□□□ -1.93
YKE2	YLR200W	HAT2	P39984	401 aa		2.97	□□□□□ -1.93
YKE2	YLR200W	VPS9	P54787	451 aa		2.97	□□□□□ -1.93
YKE2	YLR200W	CIK1	Q01649	594 aa		2.97	□□□□□ -1.93
YKE2	YLR200W	PNG1	Q02890	363 aa		2.97	□□□□□ -1.93
YKE2	YLR200W	HOT1	Q03213	719 aa		2.97	□□□□□ -1.93
YKE2	YLR200W	NDD1	Q08887	554 aa		2.97	□□□□□ -1.93
YKE2	YLR200W	RKM1	Q08961	583 aa	Predicted RBP	2.97	□□□□□ -1.93
YKE2	YLR200W	LPD1	P09624	499 aa	Known RBP	2.96	□□□□□ -1.94
YKE2	YLR200W	RPL20A	P0CX23	172 aa	Known RBP	2.96	□□□□□ -1.94
YKE2	YLR200W	RPL20B	P0CX24	172 aa	Predicted RBP	2.96	□□□□□ -1.94
YKE2	YLR200W	SEC63	P14906	663 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.94	not detected
YKE2	YLR200W	SRV2	P17555	526 aa	Known RBP	2.96	□□□□□ -1.94
YKE2	YLR200W	PUT3	P25502	979 aa	Predicted RBP	2.96	□□□□□ -1.94
YKE2	YLR200W	HIR2	P32480	875 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	ECM25	P32525	599 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	LOS1	P33418	1100 aa	Predicted RBP	2.96	□□□□□ -1.94
YKE2	YLR200W	PEX5	P35056	612 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	FRE2	P36033	711 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	PMU1	P36069	295 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	RFC3	P38629	340 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	YHR054C	P38780	354 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	RPH1	P39956	796 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	RPR2	P40571	144 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	YJR011C	P47086	261 aa	Predicted RBP	2.96	□□□□□ -1.94
YKE2	YLR200W	TCB2	P48231	1178 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	YDL186W	P48568	277 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	ODC1	Q03028	310 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	PPT2	Q12036	173 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	SET6	Q12529	373 aa		2.96	□□□□□ -1.94
YKE2	YLR200W	SCEI	P03882	235 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	YAR066W	P0CX18	203 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	YHR214W	P0CX19	203 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	URA4	P20051	364 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	CLN1	P20437	546 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	GEX1	P25596	615 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	YUR1	P26725	428 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	BEM1	P29366	551 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	PRO3	P32263	286 aa	Known RBP	2.95	□□□□□ -1.94
YKE2	YLR200W	NDI1	P32340	513 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	APE3	P37302	537 aa	Known RBP	2.95	□□□□□ -1.94
YKE2	YLR200W	SLM4	P38247	162 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	MMS4	P38257	691 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	RRT2	P38332	387 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	MTC4	P38335	694 aa	Known RBP	2.95	□□□□□ -1.94
YKE2	YLR200W	ISC1	P40015	477 aa	Known RBP	2.95	□□□□□ -1.94
YKE2	YLR200W	YJL213W	P40896	331 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	GCD10	P41814	478 aa		2.95	□□□□□ -1.94
YKE2	YLR200W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
YKE2	YLR200W	RPS0B	P46654	252 aa	Known RBP	2.95	□□□□□ -1.94
YKE2	YLR200W	ECM27	P47144	725 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 208.3 ms