RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W SKM1Q12469 655 aa1.96□□□□□ -2.1
HIT1YJR055W YBL111CQ3E7Y5 667 aa1.96□□□□□ -2.1
HIT1YJR055W RPL19AP0CX82 189 aaKnown RBP1.95□□□□□ -2.1
HIT1YJR055W RPL19BP0CX83 189 aaPredicted RBP1.95□□□□□ -2.1
HIT1YJR055W SPS22P25380 463 aa1.95□□□□□ -2.1
HIT1YJR055W DPB3P27344 201 aa1.95□□□□□ -2.1
HIT1YJR055W MNS1P32906 549 aa1.95□□□□□ -2.1
HIT1YJR055W MSR1P38714 643 aa1.95□□□□□ -2.1
HIT1YJR055W DPH1P40487 425 aaKnown RBP1.95□□□□□ -2.1
HIT1YJR055W TRS85P46944 698 aa1.95□□□□□ -2.1
HIT1YJR055W BRO1P48582 844 aa1.95□□□□□ -2.1
HIT1YJR055W IGO1P53897 168 aa1.95□□□□□ -2.1
HIT1YJR055W ATG16Q03818 150 aa1.95□□□□□ -2.1
HIT1YJR055W RPC11Q04307 110 aaPredicted RBP1.95□□□□□ -2.1
HIT1YJR055W YOR093CQ12275 1648 aa1.95□□□□□ -2.1
HIT1YJR055W DNF2Q12675 1612 aa1.95□□□□□ -2.1
HIT1YJR055W RPO31P04051 1460 aa1.94□□□□□ -2.1
HIT1YJR055W TAF2P23255 1407 aa1.94□□□□□ -2.1
HIT1YJR055W MMS1Q06211 1407 aa1.94□□□□□ -2.1
HIT1YJR055W COR1P07256 457 aa1.94□□□□□ -2.1
HIT1YJR055W HSC82P15108 705 aaKnown RBP1.94□□□□□ -2.1
HIT1YJR055W EST1P17214 699 aaPredicted RBP1.94□□□□□ -2.1
HIT1YJR055W PAP1P29468 568 aaKnown RBP1.94□□□□□ -2.1
HIT1YJR055W RRN3P36070 627 aa1.94□□□□□ -2.1
HIT1YJR055W MRPL10P36520 322 aa1.94□□□□□ -2.1
HIT1YJR055W YBR225WP38321 900 aa1.94□□□□□ -2.1
HIT1YJR055W KEL1P38853 1164 aaKnown RBP1.94□□□□□ -2.1
HIT1YJR055W ALG5P40350 334 aa1.94□□□□□ -2.1
HIT1YJR055W SYG1P40528 902 aa1.94□□□□□ -2.1
HIT1YJR055W MTM1P53320 366 aa1.94□□□□□ -2.1
HIT1YJR055W MRP51Q02950 344 aa1.94□□□□□ -2.1
HIT1YJR055W BRR1Q99177 341 aaPredicted RBP1.94□□□□□ -2.1
HIT1YJR055W GEA2P39993 1459 aaKnown RBP1.94□□□□□ -2.1
HIT1YJR055W MET5P47169 1442 aa1.93□□□□□ -2.1
HIT1YJR055W NFT1P0CE68 1218 aa1.93□□□□□ -2.1
HIT1YJR055W YAR066WP0CX18 203 aa1.93□□□□□ -2.1
HIT1YJR055W YHR214WP0CX19 203 aa1.93□□□□□ -2.1
HIT1YJR055W YCK1P23291 538 aa1.93□□□□□ -2.1
HIT1YJR055W SEF1P34228 1148 aa1.93□□□□□ -2.1
HIT1YJR055W KKQ8P36004 724 aa1.93□□□□□ -2.1
HIT1YJR055W RIB5P38145 238 aa1.93□□□□□ -2.1
HIT1YJR055W MBB1P39534 108 aa1.93□□□□□ -2.1
HIT1YJR055W ERP2P39704 215 aa1.93□□□□□ -2.1
HIT1YJR055W URB2P47108 1174 aa1.93□□□□□ -2.1
HIT1YJR055W CWC25P53854 179 aaKnown RBP1.93□□□□□ -2.1
HIT1YJR055W HXT11P54862 567 aa1.93□□□□□ -2.1
HIT1YJR055W PNG1Q02890 363 aa1.93□□□□□ -2.1
HIT1YJR055W YMR018WQ04364 514 aa1.93□□□□□ -2.1
HIT1YJR055W MFB1Q04922 465 aa1.93□□□□□ -2.1
HIT1YJR055W RAD61Q99359 647 aa1.93□□□□□ -2.1
HIT1YJR055W NUP2P32499 720 aa1.92□□□□□ -2.1
HIT1YJR055W VID24P38263 362 aa1.92□□□□□ -2.1
HIT1YJR055W MST28P39552 234 aa1.92□□□□□ -2.1
HIT1YJR055W IES5P40060 125 aa1.92□□□□□ -2.1
HIT1YJR055W GAB1P41733 394 aa1.92□□□□□ -2.1
HIT1YJR055W POP1P41812 875 aa1.92□□□□□ -2.1
HIT1YJR055W YJR085CP47131 105 aaKnown RBP1.92□□□□□ -2.1
HIT1YJR055W IMD4P50094 524 aaKnown RBP1.92□□□□□ -2.1
HIT1YJR055W MDG1P53885 366 aa1.92□□□□□ -2.1
HIT1YJR055W RKR1Q04781 1562 aa1.91□□□□□ -2.1
HIT1YJR055W RAV1P47104 1357 aa1.91□□□□□ -2.1
HIT1YJR055W TRP1P00912 224 aa1.91□□□□□ -2.1
HIT1YJR055W LEU4P06208 619 aaKnown RBP1.91□□□□□ -2.1
HIT1YJR055W TRX2P22803 104 aaKnown RBP1.91□□□□□ -2.1
HIT1YJR055W PWP2P25635 923 aaKnown RBP1.91□□□□□ -2.1
HIT1YJR055W CHS3P29465 1165 aa1.91□□□□□ -2.1
HIT1YJR055W YBL029WP38201 376 aa1.91□□□□□ -2.1
HIT1YJR055W YHR131CP38835 850 aa1.91□□□□□ -2.1
HIT1YJR055W SSU1P41930 458 aa1.91□□□□□ -2.1
HIT1YJR055W VID30P53076 958 aa1.91□□□□□ -2.1
HIT1YJR055W SLG1P54867 378 aa1.91□□□□□ -2.1
HIT1YJR055W YLL032CQ07834 825 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
HIT1YJR055W CUE5Q08412 411 aaKnown RBP1.91□□□□□ -2.1
HIT1YJR055W YKL097CP34245 136 aa1.9□□□□□ -2.11
HIT1YJR055W VPS24P36095 224 aaKnown RBP1.9□□□□□ -2.11
HIT1YJR055W TCD2P36101 447 aaKnown RBP1.9□□□□□ -2.11
HIT1YJR055W MUM2P38236 366 aa1.9□□□□□ -2.11
HIT1YJR055W YBR137WP38276 179 aa1.9□□□□□ -2.11
HIT1YJR055W YMR147WP40218 223 aaKnown RBP1.9□□□□□ -2.11
HIT1YJR055W UTP18P40362 594 aaPredicted RBP1.9□□□□□ -2.11
HIT1YJR055W NGL3Q03210 505 aa1.9□□□□□ -2.11
HIT1YJR055W YKU80Q04437 629 aa1.9□□□□□ -2.11
HIT1YJR055W YEH1Q07804 573 aa1.9□□□□□ -2.11
HIT1YJR055W IRC25Q07951 179 aa1.9□□□□□ -2.11
HIT1YJR055W MUM3Q08750 479 aa1.9□□□□□ -2.11
HIT1YJR055W RLM1Q12224 676 aa1.9□□□□□ -2.11
HIT1YJR055W YPT6Q99260 215 aa1.9□□□□□ -2.11
HIT1YJR055W BI3Q9ZZW7 517 aa1.9□□□□□ -2.11
HIT1YJR055W YCR041WP37265 110 aa1.89□□□□□ -2.11
HIT1YJR055W BMT2P38278 337 aa1.89□□□□□ -2.11
HIT1YJR055W LAM5P43560 674 aa1.89□□□□□ -2.11
HIT1YJR055W SSN8P47821 323 aa1.89□□□□□ -2.11
HIT1YJR055W PPM1Q04081 328 aa1.89□□□□□ -2.11
HIT1YJR055W VPS38Q05919 439 aa1.89□□□□□ -2.11
HIT1YJR055W IES4Q08561 116 aa1.89□□□□□ -2.11
HIT1YJR055W SSP2Q08646 371 aa1.89□□□□□ -2.11
HIT1YJR055W TIP1P27654 210 aaPredicted RBP1.88□□□□□ -2.11
HIT1YJR055W LYS14P40971 790 aa1.88□□□□□ -2.11
HIT1YJR055W FIN1Q03898 291 aa1.88□□□□□ -2.11
HIT1YJR055W SOV1Q04748 898 aa1.88□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms