RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C HES1P35843 434 aa3.42□□□□□ -1.86
VPS53YJL029C RIM2P38127 377 aa3.42□□□□□ -1.86
VPS53YJL029C RRN10P38204 145 aa3.42□□□□□ -1.86
VPS53YJL029C HXT6P39003 570 aaKnown RBP3.42□□□□□ -1.86
VPS53YJL029C HXT7P39004 570 aa3.42□□□□□ -1.86
VPS53YJL029C PLB1P39105 664 aa3.42□□□□□ -1.86
VPS53YJL029C PRP39P39682 629 aaKnown RBP3.42□□□□□ -1.86
VPS53YJL029C MET18P40469 1032 aa3.42□□□□□ -1.86
VPS53YJL029C GCD10P41814 478 aa3.42□□□□□ -1.86
VPS53YJL029C TY4A-JP47023 414 aa3.42□□□□□ -1.86
VPS53YJL029C GNP1P48813 663 aa3.42□□□□□ -1.86
VPS53YJL029C SGF73P53165 657 aa3.42□□□□□ -1.86
VPS53YJL029C YGR266WP53326 701 aa3.42□□□□□ -1.86
VPS53YJL029C SUR7P54003 302 aa3.42□□□□□ -1.86
VPS53YJL029C PRP38Q00723 242 aaPredicted RBP3.42□□□□□ -1.86
VPS53YJL029C SNP1Q00916 300 aaPredicted RBP3.42□□□□□ -1.86
VPS53YJL029C RMI1Q02685 241 aa3.42□□□□□ -1.86
VPS53YJL029C IRC15Q02733 499 aa3.42□□□□□ -1.86
VPS53YJL029C TY2A-DR2Q03483 438 aa3.42□□□□□ -1.86
VPS53YJL029C BUD22Q04347 519 aaKnown RBP3.42□□□□□ -1.86
VPS53YJL029C CRN1Q06440 651 aa3.42□□□□□ -1.86
VPS53YJL029C GIC2Q06648 383 aa3.42□□□□□ -1.86
VPS53YJL029C TEN1Q07921 160 aa3.42□□□□□ -1.86
VPS53YJL029C YLL054CQ12244 843 aa3.42□□□□□ -1.86
VPS53YJL029C TY2A-BQ12260 438 aa3.42□□□□□ -1.86
VPS53YJL029C TY2A-OR2Q12293 438 aa3.42□□□□□ -1.86
VPS53YJL029C TY2A-DR1Q12392 438 aa3.42□□□□□ -1.86
VPS53YJL029C TY2A-OR1Q12439 438 aa3.42□□□□□ -1.86
VPS53YJL029C SPE4Q12455 300 aa3.42□□□□□ -1.86
VPS53YJL029C TY2A-DR3Q99303 438 aa3.42□□□□□ -1.86
VPS53YJL029C RPS21AP0C0V8 87 aaKnown RBP3.41□□□□□ -1.86
VPS53YJL029C GUK1P15454 187 aaKnown RBP3.41□□□□□ -1.86
VPS53YJL029C URA4P20051 364 aa3.41□□□□□ -1.86
VPS53YJL029C MSB1P21339 1137 aaKnown RBP3.41□□□□□ -1.86
VPS53YJL029C ORC2P32833 620 aa3.41□□□□□ -1.86
VPS53YJL029C BMT2P38278 337 aa3.41□□□□□ -1.86
VPS53YJL029C YJL206CP39529 758 aa3.41□□□□□ -1.86
VPS53YJL029C PMT3P47190 753 aa3.41□□□□□ -1.86
VPS53YJL029C TIS11P47977 285 aa3.41□□□□□ -1.86
VPS53YJL029C LYS5P50113 272 aa3.41□□□□□ -1.86
VPS53YJL029C GTR2P53290 341 aa3.41□□□□□ -1.86
VPS53YJL029C BIO4P53630 237 aa3.41□□□□□ -1.86
VPS53YJL029C PEX25Q02969 394 aa3.41□□□□□ -1.86
VPS53YJL029C YLR053CQ12026 108 aa3.41□□□□□ -1.86
VPS53YJL029C REX3Q12090 404 aa3.41□□□□□ -1.86
VPS53YJL029C UPC2Q12151 913 aa3.41□□□□□ -1.86
VPS53YJL029C CBS2P14905 389 aa3.41□□□□□ -1.86
VPS53YJL029C HSC82P15108 705 aaKnown RBP3.41□□□□□ -1.86
VPS53YJL029C SLM5P25345 492 aaKnown RBP3.41□□□□□ -1.86
VPS53YJL029C MLF3P32047 452 aa3.41□□□□□ -1.86
VPS53YJL029C YMC1P32331 307 aa3.41□□□□□ -1.86
VPS53YJL029C EHT1P38295 451 aa3.41□□□□□ -1.86
VPS53YJL029C APQ12P40532 138 aa3.41□□□□□ -1.86
VPS53YJL029C ALK1P43633 760 aaKnown RBP3.41□□□□□ -1.86
VPS53YJL029C TIM54P47045 478 aa3.41□□□□□ -1.86
VPS53YJL029C AAT1Q01802 451 aa3.41□□□□□ -1.86
VPS53YJL029C MRS2Q01926 470 aa3.41□□□□□ -1.86
VPS53YJL029C YMR209CQ03648 457 aa3.41□□□□□ -1.86
VPS53YJL029C TRS23Q03784 219 aa3.41□□□□□ -1.86
VPS53YJL029C YMR155WQ03795 547 aa3.41□□□□□ -1.86
VPS53YJL029C DAL4Q04895 635 aa3.41□□□□□ -1.86
VPS53YJL029C GET4Q12125 312 aa3.41□□□□□ -1.86
VPS53YJL029C YPR022CQ12139 1133 aa3.41□□□□□ -1.86
VPS53YJL029C YPR011CQ12251 326 aa3.41□□□□□ -1.86
VPS53YJL029C RGT2Q12300 763 aa3.41□□□□□ -1.86
VPS53YJL029C YPL247CQ12523 523 aa3.41□□□□□ -1.86
VPS53YJL029C SRN2Q99176 213 aa3.41□□□□□ -1.86
VPS53YJL029C Q0010Q9ZZX9 128 aa3.41□□□□□ -1.86
VPS53YJL029C HFA1P32874 2273 aa3.4□□□□□ -1.86
VPS53YJL029C COX1P00401 534 aa3.4□□□□□ -1.87
VPS53YJL029C YPT1P01123 206 aaKnown RBP3.4□□□□□ -1.87
VPS53YJL029C RHO2P06781 192 aa3.4□□□□□ -1.87
VPS53YJL029C HEM13P11353 328 aaKnown RBP3.4□□□□□ -1.87
VPS53YJL029C YCR051WP25631 222 aa3.4□□□□□ -1.87
VPS53YJL029C TAH1P25638 111 aaPredicted RBP3.4□□□□□ -1.87
VPS53YJL029C PMT2P31382 759 aa3.4□□□□□ -1.87
VPS53YJL029C SIN4P32259 974 aa3.4□□□□□ -1.87
VPS53YJL029C CDC5P32562 705 aa3.4□□□□□ -1.87
VPS53YJL029C NUP120P35729 1037 aa3.4□□□□□ -1.87
VPS53YJL029C DOA1P36037 715 aa3.4□□□□□ -1.87
VPS53YJL029C YCR087C-AP37263 153 aa3.4□□□□□ -1.87
VPS53YJL029C YBR062CP38239 180 aa3.4□□□□□ -1.87
VPS53YJL029C PHO89P38361 574 aa3.4□□□□□ -1.87
VPS53YJL029C YHL008CP38750 627 aa3.4□□□□□ -1.87
VPS53YJL029C MNL1P38888 796 aa3.4□□□□□ -1.87
VPS53YJL029C QDR2P40474 542 aa3.4□□□□□ -1.87
VPS53YJL029C ELP2P42935 788 aa3.4□□□□□ -1.87
VPS53YJL029C SDT1P53078 280 aa3.4□□□□□ -1.87
VPS53YJL029C NNF2P53253 936 aa3.4□□□□□ -1.87
VPS53YJL029C USA1Q03714 838 aa3.4□□□□□ -1.87
VPS53YJL029C TAF12Q03761 539 aa3.4□□□□□ -1.87
VPS53YJL029C TPP1Q03796 238 aa3.4□□□□□ -1.87
VPS53YJL029C CSN9Q03981 162 aa3.4□□□□□ -1.87
VPS53YJL029C RAD34Q06665 692 aa3.4□□□□□ -1.87
VPS53YJL029C YLR413WQ06689 675 aa3.4□□□□□ -1.87
VPS53YJL029C CHS5Q12114 671 aaKnown RBP3.4□□□□□ -1.87
VPS53YJL029C RPS4AP0CX35 261 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C RPS4BP0CX36 261 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C NAR1P23503 491 aaKnown RBP3.39□□□□□ -1.87
VPS53YJL029C ERG1P32476 496 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 55 ms