RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	VPS33	P20795	691 aa		3.9	□□□□□ -1.79
SPI1	YER150W	PPH22	P23595	377 aa		3.9	□□□□□ -1.79
SPI1	YER150W	RBK1	P25332	333 aa		3.9	□□□□□ -1.79
SPI1	YER150W	YUR1	P26725	428 aa		3.9	□□□□□ -1.79
SPI1	YER150W	ADE1	P27616	306 aa		3.9	□□□□□ -1.79
SPI1	YER150W	KRE2	P27809	442 aa		3.9	□□□□□ -1.79
SPI1	YER150W	MEI4	P29467	408 aa		3.9	□□□□□ -1.79
SPI1	YER150W	SKG6	P32900	734 aa	Predicted RBP	3.9	□□□□□ -1.79
SPI1	YER150W	TYE7	P33122	291 aa	Predicted RBP	3.9	□□□□□ -1.79
SPI1	YER150W	ECT1	P33412	323 aa		3.9	□□□□□ -1.79
SPI1	YER150W	AST1	P35183	429 aa		3.9	□□□□□ -1.79
SPI1	YER150W	RPC25	P35718	212 aa		3.9	□□□□□ -1.79
SPI1	YER150W	DOA1	P36037	715 aa		3.9	□□□□□ -1.79
SPI1	YER150W	FES1	P38260	290 aa		3.9	□□□□□ -1.79
SPI1	YER150W	ERG7	P38604	731 aa		3.9	□□□□□ -1.79
SPI1	YER150W	VHS2	P40463	436 aa		3.9	□□□□□ -1.79
SPI1	YER150W	PHB1	P40961	287 aa		3.9	□□□□□ -1.79
SPI1	YER150W	OYE3	P41816	400 aa	Predicted RBP	3.9	□□□□□ -1.79
SPI1	YER150W	TOS3	P43637	560 aa		3.9	□□□□□ -1.79
SPI1	YER150W	AIM22	P47051	409 aa		3.9	□□□□□ -1.79
SPI1	YER150W	ASN2	P49090	572 aa	Known RBP	3.9	□□□□□ -1.79
SPI1	YER150W	TAM41	P53230	385 aa		3.9	□□□□□ -1.79
SPI1	YER150W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
SPI1	YER150W	NSG2	P53898	299 aa		3.9	□□□□□ -1.79
SPI1	YER150W	ADE16	P54113	591 aa	Known RBP	3.9	□□□□□ -1.79
SPI1	YER150W	MFM1	Q02783	413 aa		3.9	□□□□□ -1.79
SPI1	YER150W	MTG1	Q03151	367 aa	Predicted RBP	3.9	□□□□□ -1.79
SPI1	YER150W	EKI1	Q03764	534 aa		3.9	□□□□□ -1.79
SPI1	YER150W	PEX12	Q04370	399 aa		3.9	□□□□□ -1.79
SPI1	YER150W	MYO5	Q04439	1219 aa	Known RBP	3.9	□□□□□ -1.79
SPI1	YER150W	RSA3	Q05942	220 aa	Known RBP	3.9	□□□□□ -1.79
SPI1	YER150W	CDD1	Q06549	142 aa		3.9	□□□□□ -1.79
SPI1	YER150W	RXT3	Q07458	294 aa		3.9	□□□□□ -1.79
SPI1	YER150W	YDL144C	Q07589	356 aa		3.9	□□□□□ -1.79
SPI1	YER150W	PAM18	Q07914	168 aa		3.9	□□□□□ -1.79
SPI1	YER150W	YLR040C	Q07988	224 aa		3.9	□□□□□ -1.79
SPI1	YER150W	REX4	Q08237	289 aa		3.9	□□□□□ -1.79
SPI1	YER150W	GPN2	Q08726	347 aa	Predicted RBP	3.9	□□□□□ -1.79
SPI1	YER150W	RAX1	Q08760	435 aa		3.9	□□□□□ -1.79
SPI1	YER150W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.9	□□□□□ -1.79	not detected
SPI1	YER150W	RLM1	Q12224	676 aa		3.9	□□□□□ -1.79
SPI1	YER150W	SWI1	P09547	1314 aa		3.9	□□□□□ -1.79
SPI1	YER150W	ECM5	Q03214	1411 aa		3.89	□□□□□ -1.79
SPI1	YER150W	CAR1	P00812	333 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	RAD1	P06777	1100 aa		3.89	□□□□□ -1.79
SPI1	YER150W	CDC33	P07260	213 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	FBA1	P14540	359 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	MET16	P18408	261 aa	Predicted RBP	3.89	□□□□□ -1.79
SPI1	YER150W	PRP4	P20053	465 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	VPS1	P21576	704 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	MGR1	P25573	417 aa		3.89	□□□□□ -1.79
SPI1	YER150W	GSY2	P27472	705 aa		3.89	□□□□□ -1.79
SPI1	YER150W	SIN4	P32259	974 aa		3.89	□□□□□ -1.79
SPI1	YER150W	PDB1	P32473	366 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	SRB5	P32585	307 aa		3.89	□□□□□ -1.79
SPI1	YER150W	RAD23	P32628	398 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.89	□□□□□ -1.79	not detected
SPI1	YER150W	SPO23	P33757	523 aa		3.89	□□□□□ -1.79
SPI1	YER150W	CAF4	P36130	643 aa		3.89	□□□□□ -1.79
SPI1	YER150W	YNG2	P38806	282 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	YJL193W	P39542	402 aa		3.89	□□□□□ -1.79
SPI1	YER150W	SOK1	P40317	901 aa		3.89	□□□□□ -1.79
SPI1	YER150W	RSM25	P40496	264 aa		3.89	□□□□□ -1.79
SPI1	YER150W	GTS1	P40956	396 aa		3.89	□□□□□ -1.79
SPI1	YER150W	CDC40	P40968	455 aa	Predicted RBP	3.89	□□□□□ -1.79
SPI1	YER150W	YJL118W	P47022	219 aa		3.89	□□□□□ -1.79
SPI1	YER150W	IRC8	P47046	822 aa		3.89	□□□□□ -1.79
SPI1	YER150W	COX16	P47081	118 aa		3.89	□□□□□ -1.79
SPI1	YER150W	JJJ3	P47138	172 aa		3.89	□□□□□ -1.79
SPI1	YER150W	RFX1	P48743	811 aa		3.89	□□□□□ -1.79
SPI1	YER150W	IMD4	P50094	524 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	YGL159W	P53110	370 aa		3.89	□□□□□ -1.79
SPI1	YER150W	MRPL50	P53724	139 aa		3.89	□□□□□ -1.79
SPI1	YER150W	ORC3	P54790	616 aa		3.89	□□□□□ -1.79
SPI1	YER150W	VPS60	Q03390	229 aa		3.89	□□□□□ -1.79
SPI1	YER150W	RCR2	Q03446	210 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	YMR209C	Q03648	457 aa		3.89	□□□□□ -1.79
SPI1	YER150W	SPC24	Q04477	213 aa		3.89	□□□□□ -1.79
SPI1	YER150W	COX20	Q04935	205 aa		3.89	□□□□□ -1.79
SPI1	YER150W	DCR2	Q05924	578 aa		3.89	□□□□□ -1.79
SPI1	YER150W	STP3	Q05937	343 aa		3.89	□□□□□ -1.79
SPI1	YER150W	DCS1	Q06151	350 aa		3.89	□□□□□ -1.79
SPI1	YER150W	SHS1	Q07657	551 aa		3.89	□□□□□ -1.79
SPI1	YER150W	YEH2	Q07950	538 aa		3.89	□□□□□ -1.79
SPI1	YER150W	SIL1	Q08199	421 aa		3.89	□□□□□ -1.79
SPI1	YER150W	CRT10	Q08226	957 aa		3.89	□□□□□ -1.79
SPI1	YER150W	MSH5	Q12175	901 aa		3.89	□□□□□ -1.79
SPI1	YER150W	LSO2	Q3E772	92 aa	Known RBP	3.89	□□□□□ -1.79
SPI1	YER150W	AI5_BETA	Q9ZZX0	354 aa		3.89	□□□□□ -1.79
SPI1	YER150W	MF(ALPHA)1	P01149	165 aa		3.88	□□□□□ -1.79
SPI1	YER150W	CBF1	P17106	351 aa		3.88	□□□□□ -1.79
SPI1	YER150W	STE18	P18852	110 aa		3.88	□□□□□ -1.79
SPI1	YER150W	YSR3	P23501	404 aa		3.88	□□□□□ -1.79
SPI1	YER150W	VMA16	P23968	213 aa		3.88	□□□□□ -1.79
SPI1	YER150W	GIT1	P25346	518 aa		3.88	□□□□□ -1.79
SPI1	YER150W	PMI40	P29952	429 aa	Known RBP	3.88	□□□□□ -1.79
SPI1	YER150W	PRE4	P30657	266 aa		3.88	□□□□□ -1.79
SPI1	YER150W	GCG1	P32656	232 aa	Known RBP	3.88	□□□□□ -1.79
SPI1	YER150W	CSE1	P33307	960 aa		3.88	□□□□□ -1.79
SPI1	YER150W	CPR5	P35176	225 aa		3.88	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms