RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C CSG2P35206 410 aa3.31□□□□□ -1.88
CDC40YDR364C FTH1P38310 465 aa3.31□□□□□ -1.88
CDC40YDR364C RCK2P38623 610 aa3.31□□□□□ -1.88
CDC40YDR364C YHR097CP38809 366 aaKnown RBP3.31□□□□□ -1.88
CDC40YDR364C MTG2P38860 518 aa3.31□□□□□ -1.88
CDC40YDR364C YTA12P40341 825 aa3.31□□□□□ -1.88
CDC40YDR364C RPC17P47076 161 aa3.31□□□□□ -1.88
CDC40YDR364C KAP114P53067 1004 aa3.31□□□□□ -1.88
CDC40YDR364C HOS2P53096 452 aaPredicted RBP3.31□□□□□ -1.88
CDC40YDR364C YGR111WP53265 400 aa3.31□□□□□ -1.88
CDC40YDR364C EOS1P53938 366 aa3.31□□□□□ -1.88
CDC40YDR364C DIG1Q03063 452 aaKnown RBP3.31□□□□□ -1.88
CDC40YDR364C USA1Q03714 838 aa3.31□□□□□ -1.88
CDC40YDR364C PPM1Q04081 328 aa3.31□□□□□ -1.88
CDC40YDR364C VTI1Q04338 217 aa3.31□□□□□ -1.88
CDC40YDR364C ROY1Q04847 553 aa3.31□□□□□ -1.88
CDC40YDR364C GTB1Q04924 702 aa3.31□□□□□ -1.88
CDC40YDR364C RSF1Q05043 376 aa3.31□□□□□ -1.88
CDC40YDR364C YLR455WQ06188 304 aa3.31□□□□□ -1.88
CDC40YDR364C YSH1Q06224 779 aaPredicted RBP3.31□□□□□ -1.88
CDC40YDR364C YDL086WQ07505 273 aa3.31□□□□□ -1.88
CDC40YDR364C ABP140Q08641 628 aaKnown RBP3.31□□□□□ -1.88
CDC40YDR364C YPL191CQ08930 360 aa3.31□□□□□ -1.88
CDC40YDR364C HSP42Q12329 375 aa3.31□□□□□ -1.88
CDC40YDR364C MDM20Q12387 796 aaKnown RBP3.31□□□□□ -1.88
CDC40YDR364C GIS3Q12418 502 aa3.31□□□□□ -1.88
CDC40YDR364C AVL9Q12500 764 aa3.31□□□□□ -1.88
CDC40YDR364C CTF3Q12748 733 aa3.31□□□□□ -1.88
CDC40YDR364C AI5_BETAQ9ZZX0 354 aa3.31□□□□□ -1.88
CDC40YDR364C COX1P00401 534 aa3.3□□□□□ -1.88
CDC40YDR364C COX4P04037 155 aa3.3□□□□□ -1.88
CDC40YDR364C RPS3P05750 240 aaKnown RBP3.3□□□□□ -1.88
CDC40YDR364C YPK1P12688 680 aaKnown RBP3.3□□□□□ -1.88
CDC40YDR364C RPL3P14126 387 aaKnown RBP3.3□□□□□ -1.88
CDC40YDR364C GLK1P17709 500 aaKnown RBP3.3□□□□□ -1.88
CDC40YDR364C GLN3P18494 730 aa3.3□□□□□ -1.88
CDC40YDR364C RPO26P20435 155 aa3.3□□□□□ -1.88
CDC40YDR364C PRR1P28708 518 aa3.3□□□□□ -1.88
CDC40YDR364C PMT1P33775 817 aa3.3□□□□□ -1.88
CDC40YDR364C SEF1P34228 1148 aa3.3□□□□□ -1.88
CDC40YDR364C RRP1P35178 278 aaPredicted RBP3.3□□□□□ -1.88
CDC40YDR364C LAS1P36146 502 aaPredicted RBP3.3□□□□□ -1.88
CDC40YDR364C APL3P38065 1025 aa3.3□□□□□ -1.88
CDC40YDR364C YHR054CP38780 354 aa3.3□□□□□ -1.88
CDC40YDR364C CCT4P39078 528 aaKnown RBP3.3□□□□□ -1.88
CDC40YDR364C LAM5P43560 674 aa3.3□□□□□ -1.88
CDC40YDR364C PHO86P46956 311 aa3.3□□□□□ -1.88
CDC40YDR364C CTK2P46962 323 aa3.3□□□□□ -1.88
CDC40YDR364C PET130P47065 347 aa3.3□□□□□ -1.88
CDC40YDR364C BRO1P48582 844 aa3.3□□□□□ -1.88
CDC40YDR364C AZR1P50080 613 aa3.3□□□□□ -1.88
CDC40YDR364C ALT2P52892 507 aa3.3□□□□□ -1.88
CDC40YDR364C DRN1P53255 507 aaKnown RBP3.3□□□□□ -1.88
CDC40YDR364C IPI3P53877 555 aa3.3□□□□□ -1.88
CDC40YDR364C YNL134CP53912 376 aaKnown RBP3.3□□□□□ -1.88
CDC40YDR364C ALG11P53954 548 aaKnown RBP3.3□□□□□ -1.88
CDC40YDR364C YAT1P80235 687 aa3.3□□□□□ -1.88
CDC40YDR364C YPL107WQ02873 248 aa3.3□□□□□ -1.88
CDC40YDR364C PRP3Q03338 469 aaPredicted RBP3.3□□□□□ -1.88
CDC40YDR364C RSM28Q03430 361 aa3.3□□□□□ -1.88
CDC40YDR364C TRS23Q03784 219 aa3.3□□□□□ -1.88
CDC40YDR364C YDR109CQ04585 715 aa3.3□□□□□ -1.88
CDC40YDR364C ARG7Q04728 441 aa3.3□□□□□ -1.88
CDC40YDR364C SWA2Q06677 668 aa3.3□□□□□ -1.88
CDC40YDR364C SIL1Q08199 421 aa3.3□□□□□ -1.88
CDC40YDR364C SPE3Q12074 293 aaKnown RBP3.3□□□□□ -1.88
CDC40YDR364C PRS5Q12265 496 aaKnown RBP3.3□□□□□ -1.88
CDC40YDR364C YBR255C-AQ3E776 120 aa3.3□□□□□ -1.88
CDC40YDR364C AI5_ALPHAQ9ZZX1 630 aa3.3□□□□□ -1.88
CDC40YDR364C YPR117WQ06116 2489 aa3.3□□□□□ -1.88
CDC40YDR364C CDC8P00572 216 aa3.29□□□□□ -1.88
CDC40YDR364C PDA1P16387 420 aaKnown RBP3.29□□□□□ -1.88
CDC40YDR364C URA7P28274 579 aaKnown RBP3.29□□□□□ -1.88
CDC40YDR364C PUP2P32379 260 aa3.29□□□□□ -1.88
CDC40YDR364C EFB1P32471 206 aaKnown RBP3.29□□□□□ -1.88
CDC40YDR364C CDC5P32562 705 aa3.29□□□□□ -1.88
CDC40YDR364C GYP6P32806 458 aa3.29□□□□□ -1.88
CDC40YDR364C BUD2P33314 1104 aa3.29□□□□□ -1.88
CDC40YDR364C LTV1P34078 463 aa3.29□□□□□ -1.88
CDC40YDR364C CMC1P36064 111 aa3.29□□□□□ -1.88
CDC40YDR364C DRE2P36152 348 aa3.29□□□□□ -1.88
CDC40YDR364C GEX2P36173 615 aa3.29□□□□□ -1.88
CDC40YDR364C CCL1P37366 393 aa3.29□□□□□ -1.88
CDC40YDR364C RRT2P38332 387 aa3.29□□□□□ -1.88
CDC40YDR364C ALG5P40350 334 aa3.29□□□□□ -1.88
CDC40YDR364C YJR054WP47114 497 aa3.29□□□□□ -1.88
CDC40YDR364C OCA1P50946 238 aaPredicted RBP3.29□□□□□ -1.88
CDC40YDR364C YIP4P53093 235 aa3.29□□□□□ -1.88
CDC40YDR364C STR3P53101 465 aaKnown RBP3.29□□□□□ -1.88
CDC40YDR364C NMA2P53204 395 aa3.29□□□□□ -1.88
CDC40YDR364C BUD17P53727 317 aa3.29□□□□□ -1.88
CDC40YDR364C ARX1Q03862 593 aaKnown RBP3.29□□□□□ -1.88
CDC40YDR364C URH1Q04179 340 aa3.29□□□□□ -1.88
CDC40YDR364C YDR222WQ04925 415 aa3.29□□□□□ -1.88
CDC40YDR364C YLR456WQ06199 204 aa3.29□□□□□ -1.88
CDC40YDR364C LUC7Q07508 261 aaPredicted RBP3.29□□□□□ -1.88
CDC40YDR364C DNL4Q08387 944 aaPredicted RBP3.29□□□□□ -1.88
CDC40YDR364C GPN2Q08726 347 aaPredicted RBP3.29□□□□□ -1.88
CDC40YDR364C FMP40Q08968 688 aaPredicted RBP3.29□□□□□ -1.88
CDC40YDR364C SGT2Q12118 346 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms