RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	HEL1	P36113	551 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	OSH3	P38713	996 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	CCT2	P39076	527 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	TFG2	P41896	400 aa	Predicted RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	RPS0B	P46654	252 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	GUF1	P46943	645 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	YJL132W	P47014	750 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	RMD9	P53140	646 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	LSC1	P53598	329 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	BET4	Q00618	327 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	MSS11	Q03825	758 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	RSF1	Q05043	376 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	GLO2	Q05584	274 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	KEL3	Q08979	651 aa	Predicted RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	CFT2	Q12102	859 aa	Predicted RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	ARP6	Q12509	438 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	YLR278C	Q05854	1341 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	TY1B-A	O13527	1196 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	RPL1A	P0CX43	217 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	RPL1B	P0CX44	217 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	ARO3	P14843	370 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	SRV2	P17555	526 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	KRE2	P27809	442 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	SIN4	P32259	974 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	ACH1	P32316	526 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	PUP2	P32379	260 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	EFM2	P38347	419 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	RFC3	P38629	340 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	MEP2	P41948	499 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	MDV1	P47025	714 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	SAM50	P53969	484 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	RBA50	Q04418	439 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	IVY1	Q04934	453 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	YDR286C	Q05530	114 aa		2.19	□□□□□ -2.06
NCL1	YBL024W	DIS3	Q08162	1001 aa	Known RBP	2.19	□□□□□ -2.06
NCL1	YBL024W	YCR007C	P25354	239 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	RHB1	P25378	209 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	FRE1	P32791	686 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	ECM15	P35195	104 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	CAJ1	P39101	391 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	FAU1	P40099	211 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	SAS2	P40963	338 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	TOM22	P49334	152 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	GPI1	P53306	609 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	TDA7	P53882	636 aa	Predicted RBP	2.18	□□□□□ -2.06
NCL1	YBL024W	OCA2	P53949	197 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	NUP53	Q03790	475 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	YMR254C	Q04838	102 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	BNA5	Q05979	453 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	DCS1	Q06151	350 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	MLH2	Q07980	695 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	NRT1	Q08485	598 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	RKM1	Q08961	583 aa	Predicted RBP	2.18	□□□□□ -2.06
NCL1	YBL024W	UBX3	Q12229	455 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	FRE6	Q12473	712 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	SPT7	P35177	1332 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	COX3	P00420	269 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	TPM1	P17536	199 aa	Known RBP	2.18	□□□□□ -2.06
NCL1	YBL024W	BUB3	P26449	341 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	ERG1	P32476	496 aa	Known RBP	2.18	□□□□□ -2.06
NCL1	YBL024W	GYP6	P32806	458 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	VPS17	P32913	551 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	ZTA1	P38230	334 aa	Known RBP	2.18	□□□□□ -2.06
NCL1	YBL024W	MMS4	P38257	691 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	VPS52	P39904	641 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	YIL152W	P40455	235 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	VHS2	P40463	436 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	CSM2	P40465	213 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	AZF1	P41696	914 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	YPL107W	Q02873	248 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	RLI1	Q03195	608 aa	Known RBP	2.18	□□□□□ -2.06
NCL1	YBL024W	YMR034C	Q05131	434 aa	Predicted RBP	2.18	□□□□□ -2.06
NCL1	YBL024W	SNA4	Q07549	140 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	SMF3	Q12078	473 aa	Predicted RBP	2.18	□□□□□ -2.06
NCL1	YBL024W	AEP3	Q12089	606 aa		2.18	□□□□□ -2.06
NCL1	YBL024W	AMD1	P15274	810 aa	Known RBP	2.17	□□□□□ -2.06
NCL1	YBL024W	SEC62	P21825	274 aa		2.17	□□□□□ -2.06
NCL1	YBL024W	ATO2	P32907	282 aa		2.17	□□□□□ -2.06
NCL1	YBL024W	ASC1	P38011	319 aa	Known RBP	2.17	□□□□□ -2.06
NCL1	YBL024W	FAD1	P38913	306 aa		2.17	□□□□□ -2.06
NCL1	YBL024W	RHO5	P53879	331 aa	Known RBP	2.17	□□□□□ -2.06
NCL1	YBL024W	DIG1	Q03063	452 aa	Known RBP	2.17	□□□□□ -2.06
NCL1	YBL024W	HSP31	Q04432	237 aa		2.17	□□□□□ -2.06
NCL1	YBL024W	YLR456W	Q06199	204 aa		2.17	□□□□□ -2.06
NCL1	YBL024W	SYO1	Q07395	620 aa		2.17	□□□□□ -2.06
NCL1	YBL024W	CUE5	Q08412	411 aa	Known RBP	2.17	□□□□□ -2.06
NCL1	YBL024W	PGC1	Q08959	321 aa		2.17	□□□□□ -2.06
NCL1	YBL024W	NFI1	Q12216	726 aa		2.17	□□□□□ -2.06
NCL1	YBL024W	HSP42	Q12329	375 aa		2.17	□□□□□ -2.06
NCL1	YBL024W	MTR10	Q99189	972 aa		2.17	□□□□□ -2.06
NCL1	YBL024W	LEU4	P06208	619 aa	Known RBP	2.16	□□□□□ -2.06
NCL1	YBL024W	GLN3	P18494	730 aa		2.16	□□□□□ -2.06
NCL1	YBL024W	HNM1	P19807	563 aa		2.16	□□□□□ -2.06
NCL1	YBL024W	ANP1	P32629	500 aa		2.16	□□□□□ -2.06
NCL1	YBL024W	SOR1	P35497	357 aa	Known RBP	2.16	□□□□□ -2.06
NCL1	YBL024W	MIC60	P36112	540 aa		2.16	□□□□□ -2.06
NCL1	YBL024W	CBP4	P37267	147 aa		2.16	□□□□□ -2.06
NCL1	YBL024W	PCA1	P38360	1216 aa		2.16	□□□□□ -2.06
NCL1	YBL024W	YJR011C	P47086	261 aa	Predicted RBP	2.16	□□□□□ -2.06
NCL1	YBL024W	NCS2	P53923	493 aa	Predicted RBP	2.16	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms