RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 GLT8D2Q9H1C3 349 aa21.6■■□□□ 1.05
CCDC9-205ENST00000600117 FOXD4L1Q9NU39 408 aa21.6■■□□□ 1.05
CCDC9-205ENST00000600117 SLC5A4Q9NY91 659 aa21.6■■□□□ 1.05
CCDC9-205ENST00000600117 FLRT1Q9NZU1 646 aa21.6■■□□□ 1.05
CCDC9-205ENST00000600117 XBP1P17861 261 aa21.59■■□□□ 1.05
CCDC9-205ENST00000600117 GNA11P29992 359 aa21.59■■□□□ 1.05
CCDC9-205ENST00000600117 CCND3P30281 292 aaPredicted RBP21.59■■□□□ 1.05
CCDC9-205ENST00000600117 ZNF697Q5TEC3 545 aa21.59■■□□□ 1.05
CCDC9-205ENST00000600117 KRT40Q6A162 431 aa21.59■■□□□ 1.05
CCDC9-205ENST00000600117 ZNF467Q7Z7K2 595 aaPredicted RBP21.59■■□□□ 1.05
CCDC9-205ENST00000600117 C8orf76Q96K31 380 aa21.59■■□□□ 1.05
CCDC9-205ENST00000600117 PCDHA4Q9UN74 947 aa21.59■■□□□ 1.05
CCDC9-205ENST00000600117 FRMPD4Q14CM0 1322 aa21.58■■□□□ 1.05
CCDC9-205ENST00000600117 M0R2N6 131 aa21.58■■□□□ 1.05
CCDC9-205ENST00000600117 ALDH5A1P51649 535 aaPredicted RBP21.58■■□□□ 1.05
CCDC9-205ENST00000600117 OLFML2BQ68BL8 750 aa21.58■■□□□ 1.05
CCDC9-205ENST00000600117 GALNT17Q6IS24 598 aa21.58■■□□□ 1.05
CCDC9-205ENST00000600117 FCHSD1Q86WN1 690 aa21.58■■□□□ 1.05
CCDC9-205ENST00000600117 DNERQ8NFT8 737 aa21.58■■□□□ 1.05
CCDC9-205ENST00000600117 PRDM6Q9NQX0 595 aa21.58■■□□□ 1.05
CCDC9-205ENST00000600117 TMEM260Q9NX78 707 aa21.58■■□□□ 1.05
CCDC9-205ENST00000600117 KIF3AQ9Y496 699 aa21.58■■□□□ 1.05
CCDC9-205ENST00000600117 MMP1P03956 469 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 GUCY1B3Q02153 619 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 BECN1Q14457 450 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 MAMDC4Q6UXC1 1216 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 BLIDQ8IZY5 108 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 REXO1Q8N1G1 1221 aaKnown RBP21.57■■□□□ 1.04
CCDC9-205ENST00000600117 FBXO18Q8NFZ0 1043 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 BICD2Q8TD16 824 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 RASGRP4Q8TDF6 673 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 MORC4Q8TE76 937 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 RMDN3Q96TC7 470 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 PXMP2Q9NR77 195 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 ADD3Q9UEY8 706 aaKnown RBP21.57■■□□□ 1.04
CCDC9-205ENST00000600117 LRRC37A2A6NM11 1700 aa21.57■■□□□ 1.04
CCDC9-205ENST00000600117 MCM3APO60318 1980 aa21.56■■□□□ 1.04
CCDC9-205ENST00000600117 EDNRBP24530 442 aa21.56■■□□□ 1.04
CCDC9-205ENST00000600117 AP3B2Q13367 1082 aa21.56■■□□□ 1.04
CCDC9-205ENST00000600117 TRIM29Q14134 588 aa21.56■■□□□ 1.04
CCDC9-205ENST00000600117 JAKMIP3Q5VZ66 844 aa21.56■■□□□ 1.04
CCDC9-205ENST00000600117 OXER1Q8TDS5 423 aa21.56■■□□□ 1.04
CCDC9-205ENST00000600117 PCDHA6Q9UN73 950 aa21.56■■□□□ 1.04
CCDC9-205ENST00000600117 PCDHA8Q9Y5H6 950 aa21.56■■□□□ 1.04
CCDC9-205ENST00000600117 DDX49Q9Y6V7 483 aaKnown RBP21.56■■□□□ 1.04
CCDC9-205ENST00000600117 LTBP2Q14767 1821 aa21.55■■□□□ 1.04
CCDC9-205ENST00000600117 LOC102724159A0A0B4J2E5 919 aa21.55■■□□□ 1.04
CCDC9-205ENST00000600117 PWP2Q15269 919 aaKnown RBP21.55■■□□□ 1.04
CCDC9-205ENST00000600117 MSL3Q8N5Y2 521 aaKnown RBP21.55■■□□□ 1.04
CCDC9-205ENST00000600117 NSUN6Q8TEA1 469 aaKnown RBP21.55■■□□□ 1.04
CCDC9-205ENST00000600117 PGBD1Q96JS3 809 aa21.55■■□□□ 1.04
CCDC9-205ENST00000600117 CDX2Q99626 313 aaPredicted RBP21.55■■□□□ 1.04
CCDC9-205ENST00000600117 PDCD2LQ9BRP1 358 aa21.55■■□□□ 1.04
CCDC9-205ENST00000600117 TINF2Q9BSI4 451 aa21.55■■□□□ 1.04
CCDC9-205ENST00000600117 ANO3Q9BYT9 981 aa21.55■■□□□ 1.04
CCDC9-205ENST00000600117 SYNGAP1Q96PV0 1343 aa21.55■■□□□ 1.04
CCDC9-205ENST00000600117 SPDYE3A6NKU9 549 aa21.54■■□□□ 1.04
CCDC9-205ENST00000600117 FOSP01100 380 aaPredicted RBP21.54■■□□□ 1.04
CCDC9-205ENST00000600117 EIF2AK2P19525 551 aaKnown RBP21.54■■□□□ 1.04
CCDC9-205ENST00000600117 ARHGEF16Q5VV41 709 aa21.54■■□□□ 1.04
CCDC9-205ENST00000600117 MCTP2Q6DN12 878 aa21.54■■□□□ 1.04
CCDC9-205ENST00000600117 ARMCX2Q7L311 632 aa21.54■■□□□ 1.04
CCDC9-205ENST00000600117 MAFAQ8NHW3 353 aaPredicted RBP21.54■■□□□ 1.04
CCDC9-205ENST00000600117 IL31RAQ8NI17 732 aa21.54■■□□□ 1.04
CCDC9-205ENST00000600117 TNFRSF25Q93038 417 aa21.54■■□□□ 1.04
CCDC9-205ENST00000600117 SENP6Q9GZR1 1112 aaPredicted RBP21.54■■□□□ 1.04
CCDC9-205ENST00000600117 RBM19Q9Y4C8 960 aaKnown RBP21.54■■□□□ 1.04
CCDC9-205ENST00000600117 ASB14A6NK59 587 aa21.53■■□□□ 1.04
CCDC9-205ENST00000600117 SNAI1O95863 264 aaPredicted RBP21.53■■□□□ 1.04
CCDC9-205ENST00000600117 HSP90AA1P07900 732 aaKnown RBP21.53■■□□□ 1.04
CCDC9-205ENST00000600117 CYP2C19P33261 490 aa21.53■■□□□ 1.04
CCDC9-205ENST00000600117 KRT2P35908 639 aa21.53■■□□□ 1.04
CCDC9-205ENST00000600117 PGM5Q15124 567 aa21.53■■□□□ 1.04
CCDC9-205ENST00000600117 LARP1BQ659C4 914 aaKnown RBP21.53■■□□□ 1.04
CCDC9-205ENST00000600117 DIS3L2Q8IYB7 885 aaKnown RBP21.53■■□□□ 1.04
CCDC9-205ENST00000600117 SPRYD3Q8NCJ5 442 aa21.53■■□□□ 1.04
CCDC9-205ENST00000600117 IWS1Q96ST2 819 aa21.53■■□□□ 1.04
CCDC9-205ENST00000600117 PRKAG2Q9UGJ0 569 aa21.53■■□□□ 1.04
CCDC9-205ENST00000600117 BTBD18B2RXH4 712 aa21.52■■□□□ 1.04
CCDC9-205ENST00000600117 NR3C2P08235 984 aa21.52■■□□□ 1.04
CCDC9-205ENST00000600117 SREBF1P36956 1147 aa21.52■■□□□ 1.04
CCDC9-205ENST00000600117 ANP32AP39687 249 aaKnown RBP21.52■■□□□ 1.04
CCDC9-205ENST00000600117 NR5A1Q13285 461 aa21.52■■□□□ 1.04
CCDC9-205ENST00000600117 CRYGNQ8WXF5 182 aa21.52■■□□□ 1.04
CCDC9-205ENST00000600117 KATNBL1Q9H079 304 aa21.52■■□□□ 1.04
CCDC9-205ENST00000600117 SEMA6BQ9H3T3 888 aa21.52■■□□□ 1.04
CCDC9-205ENST00000600117 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.52■■□□□ 1.04
CCDC9-205ENST00000600117 MSCO60682 206 aa21.51■■□□□ 1.03
CCDC9-205ENST00000600117 MFSD14CQ5VZR4 134 aa21.51■■□□□ 1.03
CCDC9-205ENST00000600117 BRMS1Q9HCU9 246 aa21.51■■□□□ 1.03
CCDC9-205ENST00000600117 NCOR1O75376 2440 aa21.51■■□□□ 1.03
CCDC9-205ENST00000600117 MYH7BA7E2Y1 1941 aa21.51■■□□□ 1.03
CCDC9-205ENST00000600117 EDIL3O43854 480 aa21.5■■□□□ 1.03
CCDC9-205ENST00000600117 PDCP20941 246 aa21.5■■□□□ 1.03
CCDC9-205ENST00000600117 SYT1P21579 422 aa21.5■■□□□ 1.03
CCDC9-205ENST00000600117 ATN1P54259 1190 aaPredicted RBP21.5■■□□□ 1.03
CCDC9-205ENST00000600117 SAFBQ15424 915 aaKnown RBP eCLIP21.5■■□□□ 1.03
CCDC9-205ENST00000600117 EARS2Q5JPH6 523 aaKnown RBP21.5■■□□□ 1.03
CCDC9-205ENST00000600117 PCNX4Q63HM2 1172 aa21.5■■□□□ 1.03
CCDC9-205ENST00000600117 KRT25Q7Z3Z0 450 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms