RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	FPR2	P25090	351 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	CORO7	P57737	925 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	TCEA2	Q15560	299 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	RSPO2	Q6UXX9	243 aa	Predicted RBP	6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	CEP68	Q76N32	757 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	IFNL3	Q8IZI9	196 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	LZTR1	Q8N653	840 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	SLC7A14	Q8TBB6	771 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	CLUHP3	Q96NS8	147 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	MRPL4	Q9BYD3	311 aa	Known RBP	6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	FBLN5	Q9UBX5	448 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	SFMBT1	Q9UHJ3	866 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	CD2AP	Q9Y5K6	639 aa		6.23	□□□□□ -1.41
RBM39-231	ENST00000477334	AQP7	O14520	342 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	PLD2	O14939	933 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	PEX10	O60683	326 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	PNLIP	P16233	465 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	ARL4A	P40617	200 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	GTF2A2	P52657	109 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	GPR85	P60893	370 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	LSAMP	Q13449	338 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	ADGRF1	Q5T601	910 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	BICRAL	Q6AI39	1079 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	BRAP	Q7Z569	592 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	ZNF605	Q86T29	641 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	MTDH	Q86UE4	582 aa	Known RBP	6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	NLRP10	Q86W26	655 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	TMEM169	Q96HH4	297 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	ZFYVE21	Q9BQ24	234 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	MTA3	Q9BTC8	594 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	MCOLN1	Q9GZU1	580 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	CRTAC1	Q9NQ79	661 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	PPARGC1A	Q9UBK2	798 aa	Known RBP	6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	SMG5	Q9UPR3	1016 aa	Known RBP	6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	PCDHA9	Q9Y5H5	950 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	PCDHA8	Q9Y5H6	950 aa		6.22	□□□□□ -1.41
RBM39-231	ENST00000477334	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	C22orf46	C9J442	243 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	SEMA7A	O75326	666 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	CRTAM	O95727	393 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	PDE6B	P35913	854 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	LINC00310	P59036	64 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	GUCY1A3	Q02108	690 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	TRIM61	Q5EBN2	209 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	CIAPIN1	Q6FI81	312 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	LBX2	Q6XYB7	198 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	AMIGO3	Q86WK7	504 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	SYNPO	Q8N3V7	929 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	PLEKHO2	Q8TD55	490 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	TRMT2B	Q96GJ1	504 aa	Known RBP	6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	FEZ1	Q99689	392 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	ZNF552	Q9H707	407 aa	Predicted RBP	6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	CLDND1	Q9NY35	253 aa		6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	6.21	□□□□□ -1.42
RBM39-231	ENST00000477334	MYOCOS	A0A1B0GUC4	107 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	EFCAB14	O75071	495 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	RASGRP1	O95267	797 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	HSD3B2	P26439	372 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	PABPC4	Q13310	644 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	KIZ	Q2M2Z5	673 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	FNDC3B	Q53EP0	1204 aa	Known RBP	6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	PLEKHG4	Q58EX7	1191 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	FGD2	Q7Z6J4	655 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	GSTCD	Q8NEC7	633 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	SCLY	Q96I15	445 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	JAM3	Q9BX67	310 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	RXFP1	Q9HBX9	757 aa		6.2	□□□□□ -1.42
RBM39-231	ENST00000477334	NUDT19	A8MXV4	375 aa		6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	NUAK1	O60285	661 aa		6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	SOD2	P04179	222 aa		6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	NTRK1	P04629	796 aa		6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	DLG4	P78352	724 aa		6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	CABP7	Q86V35	215 aa		6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	MAGEB10	Q96LZ2	347 aa	Predicted RBP	6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	ALG1	Q9BT22	464 aa		6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	CDIP1	Q9H305	208 aa		6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	TRIM39	Q9HCM9	518 aa		6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	TNFRSF12A	Q9NP84	129 aa		6.19	□□□□□ -1.42
RBM39-231	ENST00000477334	TEX51	A0A1B0GUA7	166 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	OR14I1	A6ND48	311 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	KCNQ2	O43526	872 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	CLSTN1	O94985	981 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	MPO	P05164	745 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	DBH	P09172	617 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	SRGAP2C	P0DJJ0	459 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	GLI4	P10075	376 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	SDS	P20132	328 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	GRK2	P25098	689 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	GRK3	P35626	688 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	PAK1	Q13153	545 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	RAB3GAP1	Q15042	981 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	WWC2	Q6AWC2	1192 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	KCNJ15	Q99712	375 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	IPPK	Q9H8X2	491 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	COA3	Q9Y2R0	106 aa	Predicted RBP	6.18	□□□□□ -1.42
RBM39-231	ENST00000477334		X6R8D5	127 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	CADPS	Q9ULU8	1353 aa		6.18	□□□□□ -1.42
RBM39-231	ENST00000477334	SHROOM4	Q9ULL8	1493 aa		6.17	□□□□□ -1.42

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