RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 CYP2R1Q6VVX0 501 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 DDX46Q7L014 1031 aaKnown RBP7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 CPNE8Q86YQ8 564 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 ASB11Q8WXH4 323 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 ERVK13-1Q9NX77 482 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 MCM8Q9UJA3 840 aa7.72□□□□□ -1.17
RNU4-39P-201ENST00000362455 FRMPD1Q5SYB0 1578 aa7.71□□□□□ -1.17
RNU4-39P-201ENST00000362455 ABCA9Q8IUA7 1624 aa7.71□□□□□ -1.17
RNU4-39P-201ENST00000362455 FHOD3Q2V2M9 1422 aa7.71□□□□□ -1.17
RNU4-39P-201ENST00000362455 YEATS2Q9ULM3 1422 aa7.71□□□□□ -1.17
RNU4-39P-201ENST00000362455 TBC1D8O95759 1140 aa7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 KCNA6P17658 529 aa7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 PRKCQQ04759 706 aa7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 SEPT7Q16181 437 aaKnown RBP7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 PIK3R6Q5UE93 754 aa7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 CDCA2Q69YH5 1023 aaPredicted RBP7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 UBE2R2Q712K3 238 aaPredicted RBP7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 ZC3H7AQ8IWR0 971 aaKnown RBP7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 TMEM52Q8NDY8 209 aa7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 ALG1Q9BT22 464 aa7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 ZNF281Q9Y2X9 895 aa7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 PCDHA2Q9Y5H9 948 aa7.71□□□□□ -1.18
RNU4-39P-201ENST00000362455 PLEKHD1A6NEE1 506 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 NPTXRO95502 500 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 STRN3Q13033 797 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 PAK1Q13153 545 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 KIZQ2M2Z5 673 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 PLEKHG6Q3KR16 790 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 PRSS36Q5K4E3 855 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 ATL2Q8NHH9 583 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 FCRL2Q96LA5 508 aaPredicted RBP7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 HOMER2Q9NSB8 354 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 TYW1Q9NV66 732 aaKnown RBP7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 SAMD15Q9P1V8 674 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 VAV3Q9UKW4 847 aa7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 PCF11O94913 1555 aaKnown RBP7.7□□□□□ -1.18
RNU4-39P-201ENST00000362455 AKNAQ7Z591 1439 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 C7orf72A4D263 438 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 EYA4O95677 639 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 PDGFRBP09619 1106 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 SRGAP2CP0DJJ0 459 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 CEBPAP49715 358 aaPredicted RBP7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 IKZF1Q13422 519 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 MSMPQ1L6U9 139 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 WWC2Q6AWC2 1192 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 DDX53Q86TM3 631 aaKnown RBP7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 PCDH19Q8TAB3 1148 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 WNK4Q96J92 1243 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 FBXL7Q9UJT9 491 aa7.69□□□□□ -1.18
RNU4-39P-201ENST00000362455 DENND4BO75064 1496 aaPredicted RBP7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 MADDQ8WXG6 1647 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 MYO1BO43795 1136 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 GLRX3O76003 335 aaKnown RBP7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 SOD2P04179 222 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 CKMP06732 381 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 CD96P40200 585 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 DHCR24Q15392 516 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 FERMT3Q86UX7 667 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 IGSF22Q8N9C0 903 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 MISP3Q96FF7 219 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 KLHL42Q9P2K6 505 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 PPARGC1AQ9UBK2 798 aaKnown RBP7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 COQ6Q9Y2Z9 468 aa7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 TIMM13Q9Y5L4 95 aaPredicted RBP7.68□□□□□ -1.18
RNU4-39P-201ENST00000362455 CPEP16870 476 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 BCL6P41182 706 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 RPL11P62913 178 aaKnown RBP7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 BNIP3Q12983 259 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 SKOR2Q2VWA4 1001 aaPredicted RBP7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 HLA-DQA1Q5Y7H0 255 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 ANKLE2Q86XL3 938 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 CHAMP1Q96JM3 812 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 G6PC3Q9BUM1 346 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 IRF2BPLQ9H1B7 796 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 IPPKQ9H8X2 491 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 CARS2Q9HA77 564 aaKnown RBP7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 METTL14Q9HCE5 456 aaKnown RBP7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 FANCAO15360 1455 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 SAMD9Q5K651 1589 aa7.67□□□□□ -1.18
RNU4-39P-201ENST00000362455 M0R2C6 588 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 CBX4O00257 560 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 NPHS1O60500 1241 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 GRK2P25098 689 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 GRK3P35626 688 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 LSAMPQ13449 338 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 FAM50AQ14320 339 aaKnown RBP7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 FAM9AQ8IZU1 332 aaPredicted RBP7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 OR2W6PQ8NHA6 318 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 BCL7CQ8WUZ0 217 aaPredicted RBP7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 DPF3Q92784 378 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 SYTL4Q96C24 671 aaPredicted RBP7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 MAP6Q96JE9 813 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 ORAI3Q9BRQ5 295 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 CELF4Q9BZC1 486 aaKnown RBP7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 BSDC1Q9NW68 430 aaPredicted RBP7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 TNFRSF10DQ9UBN6 386 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 BCORL1Q5H9F3 1711 aa7.66□□□□□ -1.18
RNU4-39P-201ENST00000362455 ALG1L2C9J202 215 aa7.65□□□□□ -1.18
RNU4-39P-201ENST00000362455 FAM47E-STBD1D6RA91 191 aa7.65□□□□□ -1.18
RNU4-39P-201ENST00000362455 WNT9AO14904 365 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms