RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR48, Length 113 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR48	snR48	SYN8	P31377	255 aa		0.5	□□□□□ -2.33
snR48	snR48	PDB1	P32473	366 aa	Known RBP	0.5	□□□□□ -2.33
snR48	snR48	IFA38	P38286	347 aa		0.5	□□□□□ -2.33
snR48	snR48	YER186C	P40101	306 aa		0.5	□□□□□ -2.33
snR48	snR48	VPS4	P52917	437 aa		0.5	□□□□□ -2.33
snR48	snR48	TGL2	P54857	326 aa		0.5	□□□□□ -2.33
snR48	snR48	MUB1	Q03162	620 aa		0.5	□□□□□ -2.33
snR48	snR48	LIP2	Q06005	328 aa		0.5	□□□□□ -2.33
snR48	snR48	RKM5	Q12367	367 aa		0.5	□□□□□ -2.33
snR48	snR48	POP5	P28005	173 aa		0.49	□□□□□ -2.33
snR48	snR48	REC114	P32841	428 aa		0.49	□□□□□ -2.33
snR48	snR48	UBP11	P36026	717 aa		0.49	□□□□□ -2.33
snR48	snR48	ALY1	P36117	915 aa		0.49	□□□□□ -2.33
snR48	snR48	NUP133	P36161	1157 aa		0.49	□□□□□ -2.33
snR48	snR48	BNA4	P38169	460 aa		0.49	□□□□□ -2.33
snR48	snR48	PAF1	P38351	445 aa		0.49	□□□□□ -2.33
snR48	snR48	YNG2	P38806	282 aa	Known RBP	0.49	□□□□□ -2.33
snR48	snR48	MIG3	P39943	394 aa		0.49	□□□□□ -2.33
snR48	snR48	ISC1	P40015	477 aa	Known RBP	0.49	□□□□□ -2.33
snR48	snR48	SLZ1	P40167	298 aa		0.49	□□□□□ -2.33
snR48	snR48	SSU1	P41930	458 aa		0.49	□□□□□ -2.33
snR48	snR48	ATP22	P50273	684 aa	Predicted RBP	0.49	□□□□□ -2.33
snR48	snR48	PCP1	P53259	346 aa		0.49	□□□□□ -2.33
snR48	snR48	MTM1	P53320	366 aa		0.49	□□□□□ -2.33
snR48	snR48	MRPL13	Q02204	264 aa		0.49	□□□□□ -2.33
snR48	snR48	MSC1	Q03104	513 aa		0.49	□□□□□ -2.33
snR48	snR48	THP1	Q08231	455 aa		0.49	□□□□□ -2.33
snR48	snR48	YAR066W	P0CX18	203 aa		0.48	□□□□□ -2.33
snR48	snR48	YHR214W	P0CX19	203 aa		0.48	□□□□□ -2.33
snR48	snR48	PUP3	P25451	205 aa	Known RBP	0.48	□□□□□ -2.33
snR48	snR48	YCL049C	P25577	312 aa		0.48	□□□□□ -2.33
snR48	snR48	BUB3	P26449	341 aa		0.48	□□□□□ -2.33
snR48	snR48	CSE2	P33308	149 aa		0.48	□□□□□ -2.33
snR48	snR48	TEF4	P36008	412 aa	Known RBP	0.48	□□□□□ -2.33
snR48	snR48	PIL1	P53252	339 aa	Known RBP	0.48	□□□□□ -2.33
snR48	snR48	OGG1	P53397	376 aa	Predicted RBP	0.48	□□□□□ -2.33
snR48	snR48	HXT11	P54862	567 aa		0.48	□□□□□ -2.33
snR48	snR48	MRPS16	Q02608	121 aa		0.48	□□□□□ -2.33
snR48	snR48	YPR195C	Q06594	109 aa		0.48	□□□□□ -2.33
snR48	snR48	MUM3	Q08750	479 aa		0.48	□□□□□ -2.33
snR48	snR48	PEP4	P07267	405 aa	Known RBP	0.47	□□□□□ -2.33
snR48	snR48	RPB2	P08518	1224 aa	Known RBP	0.47	□□□□□ -2.33
snR48	snR48	YCK1	P23291	538 aa		0.47	□□□□□ -2.33
snR48	snR48	CYS4	P32582	507 aa	Known RBP	0.47	□□□□□ -2.33
snR48	snR48	RML2	P32611	393 aa		0.47	□□□□□ -2.33
snR48	snR48	CNS1	P33313	385 aa		0.47	□□□□□ -2.33
snR48	snR48	SHP1	P34223	423 aa		0.47	□□□□□ -2.33
snR48	snR48	SPT10	P35208	640 aa		0.47	□□□□□ -2.33
snR48	snR48	TCM62	P38228	572 aa	Known RBP	0.47	□□□□□ -2.33
snR48	snR48	YBR225W	P38321	900 aa		0.47	□□□□□ -2.33
snR48	snR48	CIN4	P39110	191 aa		0.47	□□□□□ -2.33
snR48	snR48	LAM5	P43560	674 aa		0.47	□□□□□ -2.33
snR48	snR48	FAR3	P46671	204 aa		0.47	□□□□□ -2.33
snR48	snR48	ZPR1	P53303	486 aa	Known RBP	0.47	□□□□□ -2.33
snR48	snR48	ARC35	P53731	342 aa	Known RBP	0.47	□□□□□ -2.33
snR48	snR48	EFM6	P53970	246 aa		0.47	□□□□□ -2.33
snR48	snR48	ADA2	Q02336	434 aa		0.47	□□□□□ -2.33
snR48	snR48	YPL107W	Q02873	248 aa		0.47	□□□□□ -2.33
snR48	snR48	ODC1	Q03028	310 aa		0.47	□□□□□ -2.33
snR48	snR48	YDR239C	Q03780	787 aa		0.47	□□□□□ -2.33
snR48	snR48	PPM1	Q04081	328 aa		0.47	□□□□□ -2.33
snR48	snR48	ADH1	P00330	348 aa	Known RBP	0.46	□□□□□ -2.34
snR48	snR48	GAL1	P04385	528 aa		0.46	□□□□□ -2.34
snR48	snR48	LEU4	P06208	619 aa	Known RBP	0.46	□□□□□ -2.34
snR48	snR48	PHO81	P17442	1178 aa		0.46	□□□□□ -2.34
snR48	snR48	SPO7	P18410	259 aa		0.46	□□□□□ -2.34
snR48	snR48	UBC1	P21734	215 aa	Known RBP	0.46	□□□□□ -2.34
snR48	snR48	SMY1	P32364	656 aa	Known RBP	0.46	□□□□□ -2.34
snR48	snR48	YBR144C	P34215	104 aa		0.46	□□□□□ -2.34
snR48	snR48	AFG3	P39925	761 aa		0.46	□□□□□ -2.34
snR48	snR48	YER184C	P39961	794 aa		0.46	□□□□□ -2.34
snR48	snR48	SEC9	P40357	651 aa		0.46	□□□□□ -2.34
snR48	snR48	YGR018C	P53211	109 aa		0.46	□□□□□ -2.34
snR48	snR48	MET14	Q02196	202 aa		0.46	□□□□□ -2.34
snR48	snR48	TCO89	Q08921	799 aa		0.46	□□□□□ -2.34
snR48	snR48	KEL3	Q08979	651 aa	Predicted RBP	0.46	□□□□□ -2.34
snR48	snR48	AHC1	Q12433	566 aa		0.46	□□□□□ -2.34
snR48	snR48	TY1B-A	O13527	1196 aa	Known RBP	0.45	□□□□□ -2.34
snR48	snR48	COX4	P04037	155 aa		0.45	□□□□□ -2.34
snR48	snR48	NAM2	P11325	894 aa		0.45	□□□□□ -2.34
snR48	snR48	MFT1	P33441	392 aa	Known RBP	0.45	□□□□□ -2.34
snR48	snR48	DTR1	P38125	572 aa		0.45	□□□□□ -2.34
snR48	snR48	POP1	P41812	875 aa		0.45	□□□□□ -2.34
snR48	snR48	MRP51	Q02950	344 aa		0.45	□□□□□ -2.34
snR48	snR48	MCH1	Q07376	486 aa		0.45	□□□□□ -2.34
snR48	snR48	RIX7	Q07844	837 aa	Known RBP	0.45	□□□□□ -2.34
snR48	snR48	IZH2	Q12442	317 aa		0.45	□□□□□ -2.34
snR48	snR48	RAX2	Q12465	1220 aa		0.45	□□□□□ -2.34
snR48	snR48	RAD61	Q99359	647 aa		0.45	□□□□□ -2.34
snR48	snR48	ART10	P18634	518 aa	Known RBP	0.44	□□□□□ -2.34
snR48	snR48	SNT1	P25357	1226 aa		0.44	□□□□□ -2.34
snR48	snR48	MRP20	P32387	263 aa		0.44	□□□□□ -2.34
snR48	snR48	REG2	P38232	338 aa		0.44	□□□□□ -2.34
snR48	snR48	YPS6	P40583	537 aa		0.44	□□□□□ -2.34
snR48	snR48	YFL012W	P43580	148 aa		0.44	□□□□□ -2.34
snR48	snR48	ALK1	P43633	760 aa	Known RBP	0.44	□□□□□ -2.34
snR48	snR48	LYS4	P49367	693 aa	Predicted RBP	0.44	□□□□□ -2.34
snR48	snR48	PNG1	Q02890	363 aa		0.44	□□□□□ -2.34
snR48	snR48	VIP1	Q06685	1146 aa	Known RBP	0.44	□□□□□ -2.34
snR48	snR48	DNL4	Q08387	944 aa	Predicted RBP	0.44	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 61.4 ms