RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C TES1P41903 349 aaKnown RBP3.06□□□□□ -1.92
RPC40YPR110C SSU1P41930 458 aa3.06□□□□□ -1.92
RPC40YPR110C RAV1P47104 1357 aa3.06□□□□□ -1.92
RPC40YPR110C YGR149WP48236 432 aa3.06□□□□□ -1.92
RPC40YPR110C FMS1P50264 508 aa3.06□□□□□ -1.92
RPC40YPR110C MNP1P53163 194 aaPredicted RBP3.06□□□□□ -1.92
RPC40YPR110C BNI5P53890 448 aaKnown RBP3.06□□□□□ -1.92
RPC40YPR110C YML133CQ03099 1374 aa3.06□□□□□ -1.92
RPC40YPR110C SLD5Q03406 294 aa3.06□□□□□ -1.92
RPC40YPR110C YMR034CQ05131 434 aaPredicted RBP3.06□□□□□ -1.92
RPC40YPR110C YLL067CQ07888 1374 aa3.06□□□□□ -1.92
RPC40YPR110C YEH2Q07950 538 aa3.06□□□□□ -1.92
RPC40YPR110C KEL3Q08979 651 aaPredicted RBP3.06□□□□□ -1.92
RPC40YPR110C YLL066CQ99208 1374 aa3.06□□□□□ -1.92
RPC40YPR110C SIN3P22579 1536 aa3.05□□□□□ -1.92
RPC40YPR110C YRF1-4O13559 1382 aa3.05□□□□□ -1.92
RPC40YPR110C BAR1P12630 587 aa3.05□□□□□ -1.92
RPC40YPR110C RPL3P14126 387 aaKnown RBP3.05□□□□□ -1.92
RPC40YPR110C APE1P14904 514 aa3.05□□□□□ -1.92
RPC40YPR110C AMD1P15274 810 aaKnown RBP3.05□□□□□ -1.92
RPC40YPR110C CDC23P16522 626 aa3.05□□□□□ -1.92
RPC40YPR110C GLK1P17709 500 aaKnown RBP3.05□□□□□ -1.92
RPC40YPR110C ATP11P32453 318 aa3.05□□□□□ -1.92
RPC40YPR110C ERG1P32476 496 aaKnown RBP3.05□□□□□ -1.92
RPC40YPR110C GCS1P35197 352 aa3.05□□□□□ -1.92
RPC40YPR110C OSH3P38713 996 aaKnown RBP3.05□□□□□ -1.92
RPC40YPR110C MET30P39014 640 aa3.05□□□□□ -1.92
RPC40YPR110C TFG2P41896 400 aaPredicted RBP3.05□□□□□ -1.92
RPC40YPR110C COS5P47187 383 aa3.05□□□□□ -1.92
RPC40YPR110C OCA1P50946 238 aaPredicted RBP3.05□□□□□ -1.92
RPC40YPR110C CUL3P53202 744 aa3.05□□□□□ -1.92
RPC40YPR110C TDA7P53882 636 aaPredicted RBP3.05□□□□□ -1.92
RPC40YPR110C RPM2Q02773 1202 aa3.05□□□□□ -1.92
RPC40YPR110C KAP120Q02932 1032 aa3.05□□□□□ -1.92
RPC40YPR110C RMT2Q03305 412 aa3.05□□□□□ -1.92
RPC40YPR110C YMR087WQ04299 284 aa3.05□□□□□ -1.92
RPC40YPR110C ERB1Q04660 807 aaKnown RBP3.05□□□□□ -1.92
RPC40YPR110C ROY1Q04847 553 aa3.05□□□□□ -1.92
RPC40YPR110C DON1Q05610 365 aa3.05□□□□□ -1.92
RPC40YPR110C SYO1Q07395 620 aa3.05□□□□□ -1.92
RPC40YPR110C SNA4Q07549 140 aa3.05□□□□□ -1.92
RPC40YPR110C COS7Q07788 383 aa3.05□□□□□ -1.92
RPC40YPR110C ICT1Q12385 394 aa3.05□□□□□ -1.92
RPC40YPR110C SMC6Q12749 1114 aa3.05□□□□□ -1.92
RPC40YPR110C BUD4P47136 1447 aa3.04□□□□□ -1.92
RPC40YPR110C HOM3P10869 527 aa3.04□□□□□ -1.92
RPC40YPR110C GLN3P18494 730 aa3.04□□□□□ -1.92
RPC40YPR110C ATP10P18496 279 aa3.04□□□□□ -1.92
RPC40YPR110C CPR2P23285 205 aa3.04□□□□□ -1.92
RPC40YPR110C PPH22P23595 377 aa3.04□□□□□ -1.92
RPC40YPR110C GEX1P25596 615 aa3.04□□□□□ -1.92
RPC40YPR110C FUN19P28003 413 aaPredicted RBP3.04□□□□□ -1.92
RPC40YPR110C AFG1P32317 509 aa3.04□□□□□ -1.92
RPC40YPR110C TMT1P32643 299 aa3.04□□□□□ -1.92
RPC40YPR110C YME2P32843 850 aa3.04□□□□□ -1.92
RPC40YPR110C SRP72P38688 640 aaKnown RBP3.04□□□□□ -1.92
RPC40YPR110C YND1P40009 630 aa3.04□□□□□ -1.92
RPC40YPR110C AZF1P41696 914 aa3.04□□□□□ -1.92
RPC40YPR110C DIM1P41819 318 aaKnown RBP3.04□□□□□ -1.92
RPC40YPR110C SCD6P45978 349 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
RPC40YPR110C RMD9P53140 646 aaKnown RBP3.04□□□□□ -1.92
RPC40YPR110C YGL082WP53155 381 aa3.04□□□□□ -1.92
RPC40YPR110C GPI1P53306 609 aa3.04□□□□□ -1.92
RPC40YPR110C VPS9P54787 451 aa3.04□□□□□ -1.92
RPC40YPR110C SKO1Q02100 647 aa3.04□□□□□ -1.92
RPC40YPR110C RBA50Q04418 439 aa3.04□□□□□ -1.92
RPC40YPR110C IVY1Q04934 453 aa3.04□□□□□ -1.92
RPC40YPR110C FMP42Q04991 504 aa3.04□□□□□ -1.92
RPC40YPR110C RRP45Q05636 305 aaKnown RBP3.04□□□□□ -1.92
RPC40YPR110C PHO92Q06390 306 aa3.04□□□□□ -1.92
RPC40YPR110C LSP1Q12230 341 aaKnown RBP3.04□□□□□ -1.92
RPC40YPR110C SSK2P53599 1579 aa3.04□□□□□ -1.92
RPC40YPR110C RIP1P08067 215 aa3.03□□□□□ -1.92
RPC40YPR110C SEC62P21825 274 aa3.03□□□□□ -1.92
RPC40YPR110C CLB1P24868 471 aa3.03□□□□□ -1.92
RPC40YPR110C YIM1P28625 365 aa3.03□□□□□ -1.92
RPC40YPR110C PXA2P34230 853 aa3.03□□□□□ -1.92
RPC40YPR110C PEX5P35056 612 aa3.03□□□□□ -1.92
RPC40YPR110C THI2P38141 450 aa3.03□□□□□ -1.92
RPC40YPR110C NTC20P38302 140 aaPredicted RBP3.03□□□□□ -1.92
RPC40YPR110C RRP3P38712 501 aaKnown RBP3.03□□□□□ -1.92
RPC40YPR110C LRP1P38801 184 aaKnown RBP3.03□□□□□ -1.92
RPC40YPR110C YIL169CP40442 995 aa3.03□□□□□ -1.92
RPC40YPR110C SYG1P40528 902 aa3.03□□□□□ -1.92
RPC40YPR110C YGL138CP53122 345 aa3.03□□□□□ -1.92
RPC40YPR110C RSC1P53236 928 aa3.03□□□□□ -1.92
RPC40YPR110C MPS1P54199 764 aa3.03□□□□□ -1.92
RPC40YPR110C DIG1Q03063 452 aaKnown RBP3.03□□□□□ -1.92
RPC40YPR110C HCR1Q05775 265 aaKnown RBP3.03□□□□□ -1.92
RPC40YPR110C FMP45Q07651 309 aa3.03□□□□□ -1.92
RPC40YPR110C CFT2Q12102 859 aaPredicted RBP3.03□□□□□ -1.92
RPC40YPR110C YDL009CQ12210 107 aa3.03□□□□□ -1.92
RPC40YPR110C ISA2Q12425 185 aa3.03□□□□□ -1.92
RPC40YPR110C AFI1Q99222 893 aa3.03□□□□□ -1.92
RPC40YPR110C ATG2P53855 1592 aa3.03□□□□□ -1.92
RPC40YPR110C SEC63P14906 663 aa3.02□□□□□ -1.93
RPC40YPR110C PPZ1P26570 692 aa3.02□□□□□ -1.93
RPC40YPR110C SEC1P30619 724 aaKnown RBP3.02□□□□□ -1.93
RPC40YPR110C SIP2P34164 415 aaKnown RBP3.02□□□□□ -1.93
RPC40YPR110C YNK1P36010 153 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 51.5 ms