RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W YCR006CP25350 157 aa1.46□□□□□ -2.18
SMC4YLR086W KRR1P25586 316 aaPredicted RBP1.46□□□□□ -2.18
SMC4YLR086W PEP3P27801 918 aa1.46□□□□□ -2.18
SMC4YLR086W ASK1P35734 292 aa1.46□□□□□ -2.18
SMC4YLR086W UIP5P36137 443 aa1.46□□□□□ -2.18
SMC4YLR086W TIF4631P39935 952 aaKnown RBP1.46□□□□□ -2.18
SMC4YLR086W CAK1P43568 368 aaPredicted RBP1.46□□□□□ -2.18
SMC4YLR086W YJR011CP47086 261 aaPredicted RBP1.46□□□□□ -2.18
SMC4YLR086W YGL108CP53139 140 aa1.46□□□□□ -2.18
SMC4YLR086W YGR126WP53274 230 aa1.46□□□□□ -2.18
SMC4YLR086W YMR254CQ04838 102 aa1.46□□□□□ -2.18
SMC4YLR086W YDR341CQ05506 607 aaKnown RBP1.46□□□□□ -2.18
SMC4YLR086W RRP45Q05636 305 aaKnown RBP1.46□□□□□ -2.18
SMC4YLR086W UBX3Q12229 455 aa1.46□□□□□ -2.18
SMC4YLR086W SMC6Q12749 1114 aa1.46□□□□□ -2.18
SMC4YLR086W SCEIP03882 235 aa1.46□□□□□ -2.18
SMC4YLR086W HOM3P10869 527 aa1.46□□□□□ -2.18
SMC4YLR086W MDM10P18409 493 aa1.46□□□□□ -2.18
SMC4YLR086W TYR1P20049 452 aa1.46□□□□□ -2.18
SMC4YLR086W DBF4P32325 704 aa1.46□□□□□ -2.18
SMC4YLR086W RAD24P32641 659 aa1.46□□□□□ -2.18
SMC4YLR086W SWH1P35845 1188 aa1.46□□□□□ -2.18
SMC4YLR086W TCM62P38228 572 aaKnown RBP1.46□□□□□ -2.18
SMC4YLR086W YIL152WP40455 235 aa1.46□□□□□ -2.18
SMC4YLR086W PCI8P40512 444 aa1.46□□□□□ -2.18
SMC4YLR086W YPS6P40583 537 aa1.46□□□□□ -2.18
SMC4YLR086W RPS7BP48164 190 aaKnown RBP1.46□□□□□ -2.18
SMC4YLR086W ATP23P53722 227 aa1.46□□□□□ -2.18
SMC4YLR086W YPL068CQ02749 293 aa1.46□□□□□ -2.18
SMC4YLR086W ERB1Q04660 807 aaKnown RBP1.46□□□□□ -2.18
SMC4YLR086W MCP2Q06567 569 aa1.46□□□□□ -2.18
SMC4YLR086W NUP157P40064 1391 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W YSP2Q06681 1438 aa1.45□□□□□ -2.18
SMC4YLR086W ARO1P08566 1588 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W SPO14P36126 1683 aa1.45□□□□□ -2.18
SMC4YLR086W NUP188P52593 1655 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W YPR089WO13585 888 aa1.45□□□□□ -2.18
SMC4YLR086W CLB1P24868 471 aa1.45□□□□□ -2.18
SMC4YLR086W MDL1P33310 695 aa1.45□□□□□ -2.18
SMC4YLR086W MBB1P39534 108 aa1.45□□□□□ -2.18
SMC4YLR086W FAU1P40099 211 aa1.45□□□□□ -2.18
SMC4YLR086W ATF1P40353 525 aa1.45□□□□□ -2.18
SMC4YLR086W SGN1P40561 250 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
SMC4YLR086W PTR3P43606 678 aa1.45□□□□□ -2.18
SMC4YLR086W PKP2P53170 491 aa1.45□□□□□ -2.18
SMC4YLR086W OGG1P53397 376 aaPredicted RBP1.45□□□□□ -2.18
SMC4YLR086W BNI5P53890 448 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W NCS2P53923 493 aaPredicted RBP1.45□□□□□ -2.18
SMC4YLR086W FMP30Q02883 468 aa1.45□□□□□ -2.18
SMC4YLR086W YDR239CQ03780 787 aa1.45□□□□□ -2.18
SMC4YLR086W ARX1Q03862 593 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W COQ9Q05779 260 aa1.45□□□□□ -2.18
SMC4YLR086W CHC1P22137 1653 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W GAL4P04386 881 aa1.45□□□□□ -2.18
SMC4YLR086W SPC110P32380 944 aa1.45□□□□□ -2.18
SMC4YLR086W NTC20P38302 140 aaPredicted RBP1.45□□□□□ -2.18
SMC4YLR086W CCT2P39076 527 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W RTS2P40962 232 aa1.45□□□□□ -2.18
SMC4YLR086W PFA5Q03289 374 aa1.45□□□□□ -2.18
SMC4YLR086W PRP3Q03338 469 aaPredicted RBP1.45□□□□□ -2.18
SMC4YLR086W PRP42Q03776 544 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W PDS5Q04264 1277 aa1.45□□□□□ -2.18
SMC4YLR086W ERP1Q05359 219 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W GSH2Q08220 491 aa1.45□□□□□ -2.18
SMC4YLR086W GLK1P17709 500 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W URE2P23202 354 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W MGM1P32266 881 aa1.45□□□□□ -2.18
SMC4YLR086W PRP21P32524 280 aaPredicted RBP1.45□□□□□ -2.18
SMC4YLR086W DIM1P41819 318 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W MLC1P53141 149 aa1.45□□□□□ -2.18
SMC4YLR086W MDG1P53885 366 aa1.45□□□□□ -2.18
SMC4YLR086W SAM50P53969 484 aa1.45□□□□□ -2.18
SMC4YLR086W URH1Q04179 340 aa1.45□□□□□ -2.18
SMC4YLR086W ROY1Q04847 553 aa1.45□□□□□ -2.18
SMC4YLR086W MDM30Q05930 598 aa1.45□□□□□ -2.18
SMC4YLR086W NOP6Q07623 225 aaKnown RBP1.45□□□□□ -2.18
SMC4YLR086W YMR085WP0CF18 432 aa1.44□□□□□ -2.18
SMC4YLR086W SNF3P10870 884 aa1.44□□□□□ -2.18
SMC4YLR086W SPB1P25582 841 aaPredicted RBP1.44□□□□□ -2.18
SMC4YLR086W CDC60P26637 1090 aaKnown RBP1.44□□□□□ -2.18
SMC4YLR086W RPN2P32565 945 aaKnown RBP1.44□□□□□ -2.18
SMC4YLR086W MSN2P33748 704 aa1.44□□□□□ -2.18
SMC4YLR086W GCS1P35197 352 aa1.44□□□□□ -2.18
SMC4YLR086W HEL1P36113 551 aa1.44□□□□□ -2.18
SMC4YLR086W YAL037WP39728 267 aa1.44□□□□□ -2.18
SMC4YLR086W VHS2P40463 436 aa1.44□□□□□ -2.18
SMC4YLR086W YIL060WP40519 144 aa1.44□□□□□ -2.18
SMC4YLR086W YIR014WP40570 242 aa1.44□□□□□ -2.18
SMC4YLR086W SGF73P53165 657 aa1.44□□□□□ -2.18
SMC4YLR086W RSC1P53236 928 aa1.44□□□□□ -2.18
SMC4YLR086W RSM23Q01163 450 aa1.44□□□□□ -2.18
SMC4YLR086W RLI1Q03195 608 aaKnown RBP1.44□□□□□ -2.18
SMC4YLR086W ACL4Q03771 387 aa1.44□□□□□ -2.18
SMC4YLR086W YEH2Q07950 538 aa1.44□□□□□ -2.18
SMC4YLR086W MLH2Q07980 695 aa1.44□□□□□ -2.18
SMC4YLR086W SGT1Q08446 395 aa1.44□□□□□ -2.18
SMC4YLR086W TY3B-GQ99315 1547 aa1.44□□□□□ -2.18
SMC4YLR086W YLR419WQ06698 1435 aaKnown RBP1.44□□□□□ -2.18
SMC4YLR086W RAV1P47104 1357 aa1.44□□□□□ -2.18
SMC4YLR086W HIP1P06775 603 aa1.44□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 8 ms