RNA–Protein interactions for RNA: YKL166C

TPK3, Transcript of cAMP-dependent protein kinase catalytic subunit, yeast

Gene TPK3, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPK3	YKL166C	HXT14	P42833	540 aa		3.13	□□□□□ -1.91
TPK3	YKL166C	RTT101	P47050	842 aa		3.13	□□□□□ -1.91
TPK3	YKL166C	SRB7	P47822	140 aa		3.13	□□□□□ -1.91
TPK3	YKL166C	GPI1	P53306	609 aa		3.13	□□□□□ -1.91
TPK3	YKL166C	ERP1	Q05359	219 aa	Known RBP	3.13	□□□□□ -1.91
TPK3	YKL166C	KEL3	Q08979	651 aa	Predicted RBP	3.13	□□□□□ -1.91
TPK3	YKL166C	TIP41	Q12199	356 aa		3.13	□□□□□ -1.91
TPK3	YKL166C	PGA3	Q12746	312 aa	Known RBP	3.13	□□□□□ -1.91
TPK3	YKL166C	CAR1	P00812	333 aa	Known RBP	3.12	□□□□□ -1.91
TPK3	YKL166C	MES1	P00958	751 aa	Known RBP	3.12	□□□□□ -1.91
TPK3	YKL166C	RED1	P14291	827 aa		3.12	□□□□□ -1.91
TPK3	YKL166C	MTF1	P14908	341 aa	Known RBP	3.12	□□□□□ -1.91
TPK3	YKL166C	GLK1	P17709	500 aa	Known RBP	3.12	□□□□□ -1.91
TPK3	YKL166C	ERG3	P32353	365 aa		3.12	□□□□□ -1.91
TPK3	YKL166C	SPC110	P32380	944 aa		3.12	□□□□□ -1.91
TPK3	YKL166C	ATP11	P32453	318 aa		3.12	□□□□□ -1.91
TPK3	YKL166C	NPL6	P32832	435 aa		3.12	□□□□□ -1.91
TPK3	YKL166C	PTR2	P32901	601 aa		3.12	□□□□□ -1.91
TPK3	YKL166C	RPR2	P40571	144 aa		3.12	□□□□□ -1.91
TPK3	YKL166C	LSP1	Q12230	341 aa	Known RBP	3.12	□□□□□ -1.91
TPK3	YKL166C	RTN2	Q12443	393 aa		3.12	□□□□□ -1.91
TPK3	YKL166C	PHO2	P07269	559 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	YCR022C	P25620	114 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	MFT1	P33441	392 aa	Known RBP	3.11	□□□□□ -1.91
TPK3	YKL166C	JNM1	P36224	373 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	MTC4	P38335	694 aa	Known RBP	3.11	□□□□□ -1.91
TPK3	YKL166C	RPH1	P39956	796 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	SYG1	P40528	902 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	VMA13	P41807	478 aa	Known RBP	3.11	□□□□□ -1.91
TPK3	YKL166C	COS10	P52924	374 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	YGL108C	P53139	140 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	IRC15	Q02733	499 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	YLR287C	Q05881	355 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	VPS74	Q06385	345 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	AYT1	Q12226	474 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	SCM3	Q12334	223 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	RKM5	Q12367	367 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	RRD2	Q12461	358 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	YBR298C-A	Q8TGK4	73 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	YML133C	Q03099	1374 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	YLL067C	Q07888	1374 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	YLL066C	Q99208	1374 aa		3.11	□□□□□ -1.91
TPK3	YKL166C	EXO70	P19658	623 aa		3.1	□□□□□ -1.91
TPK3	YKL166C	SPB1	P25582	841 aa	Predicted RBP	3.1	□□□□□ -1.91
TPK3	YKL166C	BUB3	P26449	341 aa		3.1	□□□□□ -1.91
TPK3	YKL166C	PRO3	P32263	286 aa	Known RBP	3.1	□□□□□ -1.91
TPK3	YKL166C	MDM31	P38880	579 aa		3.1	□□□□□ -1.91
TPK3	YKL166C	HAT2	P39984	401 aa		3.1	□□□□□ -1.91
TPK3	YKL166C	YFR016C	P43597	1233 aa	Known RBP	3.1	□□□□□ -1.91
TPK3	YKL166C	YDL186W	P48568	277 aa		3.1	□□□□□ -1.91
TPK3	YKL166C	OCA1	P50946	238 aa	Predicted RBP	3.1	□□□□□ -1.91
TPK3	YKL166C	RTT103	Q05543	409 aa		3.1	□□□□□ -1.91
TPK3	YKL166C	YTH1	Q06102	208 aa	Predicted RBP	3.1	□□□□□ -1.91
TPK3	YKL166C	SET6	Q12529	373 aa		3.1	□□□□□ -1.91
TPK3	YKL166C	YOL159C-A	Q3E769	90 aa		3.1	□□□□□ -1.91
TPK3	YKL166C	FUN19	P28003	413 aa	Predicted RBP	3.09	□□□□□ -1.91
TPK3	YKL166C	OTU2	P38747	307 aa	Known RBP	3.09	□□□□□ -1.91
TPK3	YKL166C	CCT4	P39078	528 aa	Known RBP	3.09	□□□□□ -1.91
TPK3	YKL166C	SHO1	P40073	367 aa		3.09	□□□□□ -1.91
TPK3	YKL166C	FAU1	P40099	211 aa		3.09	□□□□□ -1.91
TPK3	YKL166C	POP1	P41812	875 aa		3.09	□□□□□ -1.91
TPK3	YKL166C	URB2	P47108	1174 aa		3.09	□□□□□ -1.91
TPK3	YKL166C	YGR149W	P48236	432 aa		3.09	□□□□□ -1.91
TPK3	YKL166C	SYF1	Q04048	859 aa	Predicted RBP	3.09	□□□□□ -1.91
TPK3	YKL166C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
TPK3	YKL166C	PPT2	Q12036	173 aa		3.09	□□□□□ -1.91
TPK3	YKL166C	CYB2	P00175	591 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	HEM2	P05373	342 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	RHO2	P06781	192 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	GDH1	P07262	454 aa	Known RBP	3.08	□□□□□ -1.92
TPK3	YKL166C	RPL20A	P0CX23	172 aa	Known RBP	3.08	□□□□□ -1.92
TPK3	YKL166C	RPL20B	P0CX24	172 aa	Predicted RBP	3.08	□□□□□ -1.92
TPK3	YKL166C	ATR1	P13090	542 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	PRP16	P15938	1071 aa	Predicted RBP	3.08	□□□□□ -1.92
TPK3	YKL166C	ATP10	P18496	279 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	MCK1	P21965	375 aa	Known RBP	3.08	□□□□□ -1.92
TPK3	YKL166C	RAD14	P28519	371 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	AFG1	P32317	509 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	HXT3	P32466	567 aa	Known RBP	3.08	□□□□□ -1.92
TPK3	YKL166C	PMU1	P36069	295 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	KRE9	P39005	276 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	YJL213W	P40896	331 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	ELP2	P42935	788 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	GWT1	P47026	490 aa		3.08	□□□□□ -1.92
TPK3	YKL166C	KTR5	P53966	522 aa	Predicted RBP	3.08	□□□□□ -1.92
TPK3	YKL166C	RPA49	Q01080	415 aa	Predicted RBP	3.08	□□□□□ -1.92
TPK3	YKL166C	PPH22	P23595	377 aa		3.07	□□□□□ -1.92
TPK3	YKL166C	AGA1	P32323	725 aa		3.07	□□□□□ -1.92
TPK3	YKL166C	NFU1	P32860	256 aa		3.07	□□□□□ -1.92
TPK3	YKL166C	SAS3	P34218	831 aa		3.07	□□□□□ -1.92
TPK3	YKL166C	THI2	P38141	450 aa		3.07	□□□□□ -1.92
TPK3	YKL166C	LSM5	P40089	93 aa	Known RBP	3.07	□□□□□ -1.92
TPK3	YKL166C	ALG8	P40351	577 aa		3.07	□□□□□ -1.92
TPK3	YKL166C	ARK1	P53974	638 aa		3.07	□□□□□ -1.92
TPK3	YKL166C	VTA1	Q06263	330 aa		3.07	□□□□□ -1.92
TPK3	YKL166C	SFI1	Q12369	946 aa		3.07	□□□□□ -1.92
TPK3	YKL166C	LEU4	P06208	619 aa	Known RBP	3.06	□□□□□ -1.92
TPK3	YKL166C	SPS4	P09937	338 aa		3.06	□□□□□ -1.92
TPK3	YKL166C	RPL3	P14126	387 aa	Known RBP	3.06	□□□□□ -1.92
TPK3	YKL166C	RNA14	P25298	677 aa	Known RBP	3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms