RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W YHR210CP38893 341 aa3.69□□□□□ -1.82
UBP12YJL197W AIM22P47051 409 aa3.69□□□□□ -1.82
UBP12YJL197W COQ6P53318 479 aa3.69□□□□□ -1.82
UBP12YJL197W WAR1Q03631 944 aa3.69□□□□□ -1.82
UBP12YJL197W PLM2Q04383 521 aa3.69□□□□□ -1.82
UBP12YJL197W DIS3Q08162 1001 aaKnown RBP3.69□□□□□ -1.82
UBP12YJL197W LEA1Q08963 238 aaPredicted RBP3.69□□□□□ -1.82
UBP12YJL197W TRM13Q12383 476 aa3.69□□□□□ -1.82
UBP12YJL197W GDA1P32621 518 aa3.69□□□□□ -1.82
UBP12YJL197W EFM2P38347 419 aa3.69□□□□□ -1.82
UBP12YJL197W IAH1P41734 238 aa3.69□□□□□ -1.82
UBP12YJL197W YML053CQ04978 212 aa3.69□□□□□ -1.82
UBP12YJL197W YLR297WQ05899 129 aa3.69□□□□□ -1.82
UBP12YJL197W IPK1Q06667 281 aa3.69□□□□□ -1.82
UBP12YJL197W YMR085WP0CF18 432 aa3.69□□□□□ -1.82
UBP12YJL197W SGV1P23293 657 aaKnown RBP3.69□□□□□ -1.82
UBP12YJL197W SMA1Q02651 245 aa3.69□□□□□ -1.82
UBP12YJL197W ATC1Q04005 294 aa3.69□□□□□ -1.82
UBP12YJL197W ATG38Q05789 226 aaKnown RBP3.69□□□□□ -1.82
UBP12YJL197W PET111P08468 800 aa3.68□□□□□ -1.82
UBP12YJL197W GAR1P28007 205 aaKnown RBP3.68□□□□□ -1.82
UBP12YJL197W RIM1P32445 135 aaKnown RBP3.68□□□□□ -1.82
UBP12YJL197W KSP1P38691 1029 aaKnown RBP3.68□□□□□ -1.82
UBP12YJL197W BUL1P48524 976 aa3.68□□□□□ -1.82
UBP12YJL197W SPO19Q03029 223 aa3.68□□□□□ -1.82
UBP12YJL197W POS5Q06892 414 aa3.68□□□□□ -1.82
UBP12YJL197W LDB17Q12342 491 aa3.68□□□□□ -1.82
UBP12YJL197W HSP104P31539 908 aaKnown RBP3.68□□□□□ -1.82
UBP12YJL197W SIN4P32259 974 aa3.68□□□□□ -1.82
UBP12YJL197W MPP6P53725 186 aaPredicted RBP3.68□□□□□ -1.82
UBP12YJL197W BOP2Q06150 570 aa3.68□□□□□ -1.82
UBP12YJL197W YPR172WQ06608 200 aa3.68□□□□□ -1.82
UBP12YJL197W NSE1Q07913 336 aa3.68□□□□□ -1.82
UBP12YJL197W MRPL23Q12487 163 aaPredicted RBP3.68□□□□□ -1.82
UBP12YJL197W SCEIP03882 235 aa3.68□□□□□ -1.82
UBP12YJL197W ALG1P16661 449 aa3.68□□□□□ -1.82
UBP12YJL197W RPB4P20433 221 aaPredicted RBP3.68□□□□□ -1.82
UBP12YJL197W TRM2P33753 639 aa3.68□□□□□ -1.82
UBP12YJL197W SHP1P34223 423 aa3.68□□□□□ -1.82
UBP12YJL197W YKT6P36015 200 aaKnown RBP3.68□□□□□ -1.82
UBP12YJL197W KEL2P50090 882 aa3.68□□□□□ -1.82
UBP12YJL197W SPT20P50875 604 aa3.68□□□□□ -1.82
UBP12YJL197W EKI1Q03764 534 aa3.68□□□□□ -1.82
UBP12YJL197W MED7Q08278 222 aa3.68□□□□□ -1.82
UBP12YJL197W MRH1Q12117 320 aaPredicted RBP3.68□□□□□ -1.82
UBP12YJL197W NTO1Q12311 748 aa3.68□□□□□ -1.82
UBP12YJL197W RRD2Q12461 358 aa3.68□□□□□ -1.82
UBP12YJL197W THR4P16120 514 aaKnown RBP3.67□□□□□ -1.82
UBP12YJL197W SAG1P20840 650 aa3.67□□□□□ -1.82
UBP12YJL197W VHC1P38329 1120 aa3.67□□□□□ -1.82
UBP12YJL197W YMR124WP39523 943 aaKnown RBP3.67□□□□□ -1.82
UBP12YJL197W INA22P40576 216 aa3.67□□□□□ -1.82
UBP12YJL197W GTO1P48239 356 aa3.67□□□□□ -1.82
UBP12YJL197W NMA2P53204 395 aa3.67□□□□□ -1.82
UBP12YJL197W OCA2P53949 197 aa3.67□□□□□ -1.82
UBP12YJL197W TRS23Q03784 219 aa3.67□□□□□ -1.82
UBP12YJL197W EMI2Q04409 500 aaKnown RBP3.67□□□□□ -1.82
UBP12YJL197W ERV41Q04651 352 aa3.67□□□□□ -1.82
UBP12YJL197W BUG1Q12191 341 aa3.67□□□□□ -1.82
UBP12YJL197W RAV1P47104 1357 aa3.67□□□□□ -1.82
UBP12YJL197W SSA3P09435 649 aaKnown RBP3.67□□□□□ -1.82
UBP12YJL197W DMC1P25453 334 aa3.67□□□□□ -1.82
UBP12YJL197W PTC6P25646 442 aa3.67□□□□□ -1.82
UBP12YJL197W BEM1P29366 551 aa3.67□□□□□ -1.82
UBP12YJL197W SKN7P38889 622 aa3.67□□□□□ -1.82
UBP12YJL197W MBB1P39534 108 aa3.67□□□□□ -1.82
UBP12YJL197W YGR126WP53274 230 aa3.67□□□□□ -1.82
UBP12YJL197W NSG2P53898 299 aa3.67□□□□□ -1.82
UBP12YJL197W ADF1Q2V2Q1 113 aa3.67□□□□□ -1.82
UBP12YJL197W YPR053CQ6Q5F3 151 aa3.67□□□□□ -1.82
UBP12YJL197W COR1P07256 457 aa3.67□□□□□ -1.82
UBP12YJL197W RNR3P21672 869 aaKnown RBP3.67□□□□□ -1.82
UBP12YJL197W CNA1P23287 553 aa3.67□□□□□ -1.82
UBP12YJL197W MRPL25P23369 157 aa3.67□□□□□ -1.82
UBP12YJL197W TPO5P36029 618 aa3.67□□□□□ -1.82
UBP12YJL197W YBR139WP38109 508 aa3.67□□□□□ -1.82
UBP12YJL197W KEL1P38853 1164 aaKnown RBP3.67□□□□□ -1.82
UBP12YJL197W ARG2P40360 574 aa3.67□□□□□ -1.82
UBP12YJL197W TFG2P41896 400 aaPredicted RBP3.67□□□□□ -1.82
UBP12YJL197W GCD14P46959 383 aaPredicted RBP3.67□□□□□ -1.82
UBP12YJL197W YIP5P53108 310 aa3.67□□□□□ -1.82
UBP12YJL197W SMA2Q04658 369 aa3.67□□□□□ -1.82
UBP12YJL197W HRD3Q05787 833 aa3.67□□□□□ -1.82
UBP12YJL197W STE23Q06010 1027 aa3.67□□□□□ -1.82
UBP12YJL197W MDM20Q12387 796 aaKnown RBP3.67□□□□□ -1.82
UBP12YJL197W ZPS1Q12512 249 aa3.67□□□□□ -1.82
UBP12YJL197W STE2D6VTK4 431 aa3.66□□□□□ -1.82
UBP12YJL197W ADE4P04046 510 aaKnown RBP3.66□□□□□ -1.82
UBP12YJL197W PEP4P07267 405 aaKnown RBP3.66□□□□□ -1.82
UBP12YJL197W MRP2P10663 115 aaPredicted RBP3.66□□□□□ -1.82
UBP12YJL197W GAL3P13045 520 aa3.66□□□□□ -1.82
UBP12YJL197W MTR2P34232 184 aaKnown RBP3.66□□□□□ -1.82
UBP12YJL197W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
UBP12YJL197W PCA1P38360 1216 aa3.66□□□□□ -1.82
UBP12YJL197W EMC2P47133 292 aaKnown RBP3.66□□□□□ -1.82
UBP12YJL197W HEF3P53978 1044 aaKnown RBP3.66□□□□□ -1.82
UBP12YJL197W RDR1Q08904 546 aa3.66□□□□□ -1.82
UBP12YJL197W MED4Q12343 284 aa3.66□□□□□ -1.82
UBP12YJL197W LAM4P38800 1345 aa3.66□□□□□ -1.82
UBP12YJL197W ERG11P10614 530 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms