RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B HIT1P46973 164 aa1.59□□□□□ -2.16
YGR109W-BYGR109W-B UBP8P50102 471 aa1.59□□□□□ -2.16
YGR109W-BYGR109W-B PIB2P53191 635 aa1.59□□□□□ -2.16
YGR109W-BYGR109W-B YGR168CP53293 376 aa1.59□□□□□ -2.16
YGR109W-BYGR109W-B MET14Q02196 202 aa1.59□□□□□ -2.16
YGR109W-BYGR109W-B MGR3Q04472 501 aa1.59□□□□□ -2.16
YGR109W-BYGR109W-B SWF1Q04629 336 aa1.59□□□□□ -2.16
YGR109W-BYGR109W-B GTO3Q04806 366 aa1.59□□□□□ -2.16
YGR109W-BYGR109W-B ARV1Q06541 321 aa1.59□□□□□ -2.16
YGR109W-BYGR109W-B RRG1Q12167 365 aaPredicted RBP1.59□□□□□ -2.16
YGR109W-BYGR109W-B RRP42Q12277 265 aaPredicted RBP1.59□□□□□ -2.16
YGR109W-BYGR109W-B GPH1P06738 902 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B ILV2P07342 687 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B CDC23P16522 626 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B NDI1P32340 513 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B GCS1P35197 352 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B YKT6P36015 200 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B ECM4P36156 370 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B DUG2P38149 878 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B EHT1P38295 451 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B MMS21P38632 267 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B YHR131CP38835 850 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B GPP2P40106 250 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B YJL068CP40363 299 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B SEC28P40509 296 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B GCD14P46959 383 aaPredicted RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B UPF3P48412 387 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B TRF5P48561 642 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B MPC1P53157 130 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B BSC5P53755 489 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B YAT1P80235 687 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B SNU56Q03782 492 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B RKM1Q08961 583 aaPredicted RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B TRM8Q12009 286 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B RAV1P47104 1357 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B JIP3O13555 125 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B MAK32P23060 363 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B ESL2P36168 1195 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B ROT2P38138 954 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B YBR137WP38276 179 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B VBA2P38358 474 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B ARN1P38731 627 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B GIM4P40005 111 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B VID27P40157 782 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B BRO1P48582 844 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B MPP6P53725 186 aaPredicted RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B REG1Q00816 1014 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B VPS64Q03944 604 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B GPI17Q04080 534 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B VPS38Q05919 439 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B SSK1Q07084 712 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B YLR031WQ07978 186 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B YOR389WQ08912 624 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B YRF1-4O13559 1382 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B ATP2P00830 511 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B AMD1P15274 810 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B OSM1P21375 501 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B GID7P25569 745 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B ITR2P30606 609 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B NUF2P33895 451 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B VPS8P39702 1274 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B ARB1P40024 610 aaKnown RBP1.58□□□□□ -2.16
YGR109W-BYGR109W-B SNL1P40548 159 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B RAD17P48581 401 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B KAP120Q02932 1032 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B HOT1Q03213 719 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B PRM15Q03262 622 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B YDR056CQ12025 205 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B SWT1Q12104 458 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B ATG9Q12142 997 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B SCM3Q12334 223 aa1.58□□□□□ -2.16
YGR109W-BYGR109W-B PIF1P07271 859 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B MSF1P08425 469 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B GCD2P12754 651 aaPredicted RBP1.57□□□□□ -2.16
YGR109W-BYGR109W-B MDH1P17505 334 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
YGR109W-BYGR109W-B ISY1P21374 235 aaPredicted RBP1.57□□□□□ -2.16
YGR109W-BYGR109W-B HIR2P32480 875 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B YDR089WP38966 869 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B VRG4P40107 337 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B DOT5P40553 215 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B RET3P53600 189 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B COG6P53959 839 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B PLP1Q04004 230 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B YOR378WQ08902 515 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B BAG7Q12128 409 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B AHC1Q12433 566 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B CEX1Q12453 761 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B TFB5Q3E7C1 72 aaPredicted RBP1.57□□□□□ -2.16
YGR109W-BYGR109W-B SEC7P11075 2009 aaKnown RBP1.57□□□□□ -2.16
YGR109W-BYGR109W-B SPS4P09937 338 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B RPS21AP0C0V8 87 aaKnown RBP1.57□□□□□ -2.16
YGR109W-BYGR109W-B RPB8P20436 146 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B SLM5P25345 492 aaKnown RBP1.57□□□□□ -2.16
YGR109W-BYGR109W-B VPH2P32341 215 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B GDA1P32621 518 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B MSN4P33749 630 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B YHR182WP38870 785 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B SEC31P38968 1273 aaKnown RBP1.57□□□□□ -2.16
YGR109W-BYGR109W-B FRT2P39734 528 aa1.57□□□□□ -2.16
YGR109W-BYGR109W-B VFA1P40080 203 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms