RNA–Protein interactions for RNA: YGL212W

VAM7, Transcript of Vacuolar SNARE protein, yeast

Gene VAM7, Length 951 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM7	YGL212W	RAM1	P22007	431 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	YCR061W	P25639	631 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	ADE1	P27616	306 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	VMA6	P32366	345 aa	Known RBP	5.37	□□□□□ -1.55
VAM7	YGL212W	SCD5	P34758	872 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	ALY1	P36117	915 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	DBP7	P36120	742 aa	Known RBP	5.37	□□□□□ -1.55
VAM7	YGL212W	MRPL4	P36517	319 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	CST26	P38226	397 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	VID24	P38263	362 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	ARP1	P38696	384 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	FRT2	P39734	528 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	SLZ1	P40167	298 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	INP51	P40559	946 aa	Known RBP	5.37	□□□□□ -1.55
VAM7	YGL212W	TFG2	P41896	400 aa	Predicted RBP	5.37	□□□□□ -1.55
VAM7	YGL212W	RGD2	P43556	714 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	RPA34	P47006	233 aa	Predicted RBP	5.37	□□□□□ -1.55
VAM7	YGL212W	DAM1	P53267	343 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	YGR283C	P53336	341 aa	Predicted RBP	5.37	□□□□□ -1.55
VAM7	YGL212W	RCF2	P53721	224 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	RHO5	P53879	331 aa	Known RBP	5.37	□□□□□ -1.55
VAM7	YGL212W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.37	□□□□□ -1.55	not detected
VAM7	YGL212W	MTD1	Q02046	320 aa	Known RBP	5.37	□□□□□ -1.55
VAM7	YGL212W	NOG1	Q02892	647 aa	Known RBP	5.37	□□□□□ -1.55
VAM7	YGL212W	MRP51	Q02950	344 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	GCN5	Q03330	439 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	RCO1	Q04779	684 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	CTS2	Q06350	511 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	SGO1	Q08490	590 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	YOR238W	Q08634	303 aa		5.37	□□□□□ -1.55
VAM7	YGL212W	YPL225W	Q08971	146 aa	Known RBP	5.37	□□□□□ -1.55
VAM7	YGL212W	RPP0	P05317	312 aa	Known RBP	5.36	□□□□□ -1.55
VAM7	YGL212W	NHP6B	P11633	99 aa	Known RBP	5.36	□□□□□ -1.55
VAM7	YGL212W	UBA1	P22515	1024 aa	Known RBP	5.36	□□□□□ -1.55
VAM7	YGL212W	YCK1	P23291	538 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	CTR86	P25355	563 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	HCM1	P25364	564 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	VMA3	P25515	160 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	PBN1	P25580	416 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	IDH2	P28241	369 aa	Known RBP	5.36	□□□□□ -1.55
VAM7	YGL212W	PEX3	P28795	441 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	FAA1	P30624	700 aa	Known RBP	5.36	□□□□□ -1.55
VAM7	YGL212W	GCD11	P32481	527 aa	Known RBP	5.36	□□□□□ -1.55
VAM7	YGL212W	RPD3	P32561	433 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	AST1	P35183	429 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	CDC27	P38042	758 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	FAT1	P38225	669 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	AME1	P38313	324 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	SRP68	P38687	599 aa	Known RBP	5.36	□□□□□ -1.55
VAM7	YGL212W	SSP120	P39931	234 aa	Known RBP	5.36	□□□□□ -1.55
VAM7	YGL212W	EAF5	P39995	279 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	RIO2	P40160	425 aa	Known RBP	5.36	□□□□□ -1.55
VAM7	YGL212W	YJR056C	P47115	236 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	RPA14	P50106	137 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	YGL159W	P53110	370 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	PEF1	P53238	335 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	NUP116	Q02630	1113 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	YDC1	Q02896	317 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	DML1	Q03652	475 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	ENT5	Q03769	411 aa	Known RBP	5.36	□□□□□ -1.55
VAM7	YGL212W	YDR222W	Q04925	415 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	SPO77	Q06134	477 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	YFH1	Q07540	174 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	RTT109	Q07794	436 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	UAF30	Q08747	228 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	RSA1	Q08932	381 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	DAS2	Q12084	232 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	VAM3	Q12241	283 aa		5.36	□□□□□ -1.55
VAM7	YGL212W	TDH2	P00358	332 aa	Known RBP	5.35	□□□□□ -1.55
VAM7	YGL212W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
VAM7	YGL212W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.35	□□□□□ -1.55	not detected
VAM7	YGL212W	POX1	P13711	748 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	ZRC1	P20107	442 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	YCP4	P25349	247 aa	Known RBP	5.35	□□□□□ -1.55
VAM7	YGL212W	PAT1	P25644	796 aa	Known RBP	5.35	□□□□□ -1.55
VAM7	YGL212W	CIN8	P27895	1000 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	SEC65	P29478	273 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	MRP20	P32387	263 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	EMC3	P36039	253 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	AGP2	P38090	596 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	REG2	P38232	338 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	STP2	P38704	541 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	YHI9	P38765	294 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	SEN34	P39707	275 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	RGI2	P40188	164 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	QRI1	P43123	477 aa	Known RBP	5.35	□□□□□ -1.55
VAM7	YGL212W	SAD1	P43589	448 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	IMA1	P53051	589 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	YGL204C	P53089	101 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	YGL185C	P53100	379 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	NSA1	P53136	463 aa	Predicted RBP	5.35	□□□□□ -1.55
VAM7	YGL212W	YGR066C	P53242	292 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	YMR114C	Q04471	368 aa	Known RBP	5.35	□□□□□ -1.55
VAM7	YGL212W	HCR1	Q05775	265 aa	Known RBP	5.35	□□□□□ -1.55
VAM7	YGL212W	YDL144C	Q07589	356 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	YLR040C	Q07988	224 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	XYL2	Q07993	356 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	YOL019W	Q08157	551 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	YOL075C	Q08234	1294 aa		5.35	□□□□□ -1.55
VAM7	YGL212W	NRT1	Q08485	598 aa		5.35	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms