RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeastyeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC55YGL190C ATG23Q06671 453 aa2.89□□□□□ -1.95
CDC55YGL190C NRT1Q08485 598 aa2.89□□□□□ -1.95
CDC55YGL190C PDH1Q12428 516 aaKnown RBP2.89□□□□□ -1.95
CDC55YGL190C LSO2Q3E772 92 aaKnown RBP2.89□□□□□ -1.95
CDC55YGL190C XRN1P22147 1528 aaKnown RBP2.88□□□□□ -1.95
CDC55YGL190C BUD4P47136 1447 aa2.88□□□□□ -1.95
CDC55YGL190C YLR419WQ06698 1435 aaKnown RBP2.88□□□□□ -1.95
CDC55YGL190C RPS3P05750 240 aaKnown RBP2.88□□□□□ -1.95
CDC55YGL190C DFR1P07807 211 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
CDC55YGL190C APE1P14904 514 aa2.88□□□□□ -1.95
CDC55YGL190C MRPS28P21771 286 aa2.88□□□□□ -1.95
CDC55YGL190C YCR006CP25350 157 aa2.88□□□□□ -1.95
CDC55YGL190C CDC15P27636 974 aa2.88□□□□□ -1.95
CDC55YGL190C TPS2P31688 896 aaKnown RBP2.88□□□□□ -1.95
CDC55YGL190C KRE6P32486 720 aa2.88□□□□□ -1.95
CDC55YGL190C YEL043WP32618 956 aa2.88□□□□□ -1.95
CDC55YGL190C YBL028CP38202 106 aa2.88□□□□□ -1.95
CDC55YGL190C TIF5P38431 405 aaKnown RBP2.88□□□□□ -1.95
CDC55YGL190C YJL070CP40361 888 aa2.88□□□□□ -1.95
CDC55YGL190C PHB1P40961 287 aa2.88□□□□□ -1.95
CDC55YGL190C YJL055WP47044 245 aa2.88□□□□□ -1.95
CDC55YGL190C YGL242CP53066 181 aa2.88□□□□□ -1.95
CDC55YGL190C SHE10P53075 577 aa2.88□□□□□ -1.95
CDC55YGL190C ALF1P53904 254 aa2.88□□□□□ -1.95
CDC55YGL190C ESBP6P53918 673 aa2.88□□□□□ -1.95
CDC55YGL190C ARP5P53946 755 aa2.88□□□□□ -1.95
CDC55YGL190C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
CDC55YGL190C OAZ1Q02803 292 aa2.88□□□□□ -1.95
CDC55YGL190C YML108WQ03759 105 aa2.88□□□□□ -1.95
CDC55YGL190C YLH47Q06493 454 aa2.88□□□□□ -1.95
CDC55YGL190C YDL144CQ07589 356 aa2.88□□□□□ -1.95
CDC55YGL190C YPT6Q99260 215 aa2.88□□□□□ -1.95
CDC55YGL190C TSC11P40061 1430 aa2.88□□□□□ -1.95
CDC55YGL190C PDR18P53756 1333 aa2.87□□□□□ -1.95
CDC55YGL190C HIS3P06633 220 aa2.87□□□□□ -1.95
CDC55YGL190C SSC1P0CS90 654 aaKnown RBP2.87□□□□□ -1.95
CDC55YGL190C REC107P21651 314 aa2.87□□□□□ -1.95
CDC55YGL190C RRP7P25368 297 aaPredicted RBP2.87□□□□□ -1.95
CDC55YGL190C YCR051WP25631 222 aa2.87□□□□□ -1.95
CDC55YGL190C YIH1P25637 258 aa2.87□□□□□ -1.95
CDC55YGL190C DAL80P26343 269 aa2.87□□□□□ -1.95
CDC55YGL190C BMH1P29311 267 aaKnown RBP2.87□□□□□ -1.95
CDC55YGL190C SEC66P33754 206 aa2.87□□□□□ -1.95
CDC55YGL190C SRL3P36167 246 aa2.87□□□□□ -1.95
CDC55YGL190C AGP2P38090 596 aa2.87□□□□□ -1.95
CDC55YGL190C SMC2P38989 1170 aaKnown RBP2.87□□□□□ -1.95
CDC55YGL190C CCT4P39078 528 aaKnown RBP2.87□□□□□ -1.95
CDC55YGL190C SNZ3P43545 298 aa2.87□□□□□ -1.95
CDC55YGL190C CTK2P46962 323 aa2.87□□□□□ -1.95
CDC55YGL190C VPS25P47142 202 aa2.87□□□□□ -1.95
CDC55YGL190C SSN8P47821 323 aa2.87□□□□□ -1.95
CDC55YGL190C NUP84P52891 726 aa2.87□□□□□ -1.95
CDC55YGL190C SNZ2P53824 298 aa2.87□□□□□ -1.95
CDC55YGL190C HOT1Q03213 719 aa2.87□□□□□ -1.95
CDC55YGL190C YDR239CQ03780 787 aa2.87□□□□□ -1.95
CDC55YGL190C BUD22Q04347 519 aaKnown RBP2.87□□□□□ -1.95
CDC55YGL190C SWF1Q04629 336 aa2.87□□□□□ -1.95
CDC55YGL190C VPS38Q05919 439 aa2.87□□□□□ -1.95
CDC55YGL190C YTH1Q06102 208 aaPredicted RBP2.87□□□□□ -1.95
CDC55YGL190C YLR455WQ06188 304 aa2.87□□□□□ -1.95
CDC55YGL190C FMP45Q07651 309 aa2.87□□□□□ -1.95
CDC55YGL190C BAG7Q12128 409 aa2.87□□□□□ -1.95
CDC55YGL190C NOT5Q12514 560 aaPredicted RBP2.87□□□□□ -1.95
CDC55YGL190C TRM3Q07527 1436 aa2.87□□□□□ -1.95
CDC55YGL190C SMC4Q12267 1418 aa2.87□□□□□ -1.95
CDC55YGL190C STF1P01098 86 aa2.87□□□□□ -1.95
CDC55YGL190C CDC37P06101 506 aaKnown RBP2.87□□□□□ -1.95
CDC55YGL190C ARD1P07347 238 aaPredicted RBP2.87□□□□□ -1.95
CDC55YGL190C CHO1P08456 276 aa2.87□□□□□ -1.95
CDC55YGL190C EST1P17214 699 aaPredicted RBP2.87□□□□□ -1.95
CDC55YGL190C MDH1P17505 334 aaKnown RBP RIP-Chip data2.87□□□□□ -1.95not detected
CDC55YGL190C VPH2P32341 215 aa2.87□□□□□ -1.95
CDC55YGL190C RSM22P36056 628 aa2.87□□□□□ -1.95
CDC55YGL190C MAK5P38112 773 aaPredicted RBP2.87□□□□□ -1.95
CDC55YGL190C CST26P38226 397 aa2.87□□□□□ -1.95
CDC55YGL190C GDT1P38301 280 aaPredicted RBP2.87□□□□□ -1.95
CDC55YGL190C RRF1P38771 230 aa2.87□□□□□ -1.95
CDC55YGL190C CTM1P38818 585 aa2.87□□□□□ -1.95
CDC55YGL190C CCT6P39079 546 aa2.87□□□□□ -1.95
CDC55YGL190C FYV8P46949 817 aaKnown RBP2.87□□□□□ -1.95
CDC55YGL190C TRF5P48561 642 aaKnown RBP2.87□□□□□ -1.95
CDC55YGL190C MIG2P53035 382 aa2.87□□□□□ -1.95
CDC55YGL190C ASI1P54074 624 aa2.87□□□□□ -1.95
CDC55YGL190C PRP42Q03776 544 aaKnown RBP2.87□□□□□ -1.95
CDC55YGL190C PLP1Q04004 230 aa2.87□□□□□ -1.95
CDC55YGL190C DCS1Q06151 350 aa2.87□□□□□ -1.95
CDC55YGL190C CRN1Q06440 651 aa2.87□□□□□ -1.95
CDC55YGL190C CUE5Q08412 411 aaKnown RBP2.87□□□□□ -1.95
CDC55YGL190C GPN2Q08726 347 aaPredicted RBP2.87□□□□□ -1.95
CDC55YGL190C ATG29Q12092 213 aa2.87□□□□□ -1.95
CDC55YGL190C AFI1Q99222 893 aa2.87□□□□□ -1.95
CDC55YGL190C GAL80P04387 435 aa2.86□□□□□ -1.95
CDC55YGL190C DSF1P0CX08 502 aa2.86□□□□□ -1.95
CDC55YGL190C YNR073CP0CX09 502 aa2.86□□□□□ -1.95
CDC55YGL190C GLK1P17709 500 aaKnown RBP2.86□□□□□ -1.95
CDC55YGL190C TRX1P22217 103 aaKnown RBP2.86□□□□□ -1.95
CDC55YGL190C ERV1P27882 189 aa2.86□□□□□ -1.95
CDC55YGL190C URA7P28274 579 aaKnown RBP2.86□□□□□ -1.95
CDC55YGL190C HSP104P31539 908 aaKnown RBP2.86□□□□□ -1.95
CDC55YGL190C RPN2P32565 945 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms