RNA–Protein interactions for RNA: YDR540C

IRC4, Transcript of Putative protein of unknown function, yeastyeast

Gene IRC4, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC4YDR540C RTT101P47050 842 aa2.45□□□□□ -2.02
IRC4YDR540C YGL260WP53056 76 aa2.45□□□□□ -2.02
IRC4YDR540C CAF130P53280 1122 aaPredicted RBP2.45□□□□□ -2.02
IRC4YDR540C MRPL19P53875 158 aa2.45□□□□□ -2.02
IRC4YDR540C RQC1Q05468 723 aaKnown RBP2.45□□□□□ -2.02
IRC4YDR540C RTT103Q05543 409 aa2.45□□□□□ -2.02
IRC4YDR540C RIM20Q12033 661 aa2.45□□□□□ -2.02
IRC4YDR540C PGA3Q12746 312 aaKnown RBP2.45□□□□□ -2.02
IRC4YDR540C MTF1P14908 341 aaKnown RBP2.44□□□□□ -2.02
IRC4YDR540C GLK1P17709 500 aaKnown RBP2.44□□□□□ -2.02
IRC4YDR540C ATS1P31386 333 aa2.44□□□□□ -2.02
IRC4YDR540C ERG3P32353 365 aa2.44□□□□□ -2.02
IRC4YDR540C PTR2P32901 601 aa2.44□□□□□ -2.02
IRC4YDR540C PMT1P33775 817 aa2.44□□□□□ -2.02
IRC4YDR540C RPR2P40571 144 aa2.44□□□□□ -2.02
IRC4YDR540C VMA13P41807 478 aaKnown RBP2.44□□□□□ -2.02
IRC4YDR540C HXT14P42833 540 aa2.44□□□□□ -2.02
IRC4YDR540C YDL186WP48568 277 aa2.44□□□□□ -2.02
IRC4YDR540C ZPR1P53303 486 aaKnown RBP2.44□□□□□ -2.02
IRC4YDR540C GPI1P53306 609 aa2.44□□□□□ -2.02
IRC4YDR540C MRPL51Q06090 140 aaPredicted RBP2.44□□□□□ -2.02
IRC4YDR540C YTH1Q06102 208 aaPredicted RBP2.44□□□□□ -2.02
IRC4YDR540C TIP41Q12199 356 aa2.44□□□□□ -2.02
IRC4YDR540C RTN2Q12443 393 aa2.44□□□□□ -2.02
IRC4YDR540C RRD2Q12461 358 aa2.44□□□□□ -2.02
IRC4YDR540C BRR1Q99177 341 aaPredicted RBP2.44□□□□□ -2.02
IRC4YDR540C MES1P00958 751 aaKnown RBP2.43□□□□□ -2.02
IRC4YDR540C INH1P01097 85 aa2.43□□□□□ -2.02
IRC4YDR540C RED1P14291 827 aa2.43□□□□□ -2.02
IRC4YDR540C YCR022CP25620 114 aa2.43□□□□□ -2.02
IRC4YDR540C NPL6P32832 435 aa2.43□□□□□ -2.02
IRC4YDR540C MFT1P33441 392 aaKnown RBP2.43□□□□□ -2.02
IRC4YDR540C MTC4P38335 694 aaKnown RBP2.43□□□□□ -2.02
IRC4YDR540C MDM31P38880 579 aa2.43□□□□□ -2.02
IRC4YDR540C RPH1P39956 796 aa2.43□□□□□ -2.02
IRC4YDR540C HAT2P39984 401 aa2.43□□□□□ -2.02
IRC4YDR540C FAU1P40099 211 aa2.43□□□□□ -2.02
IRC4YDR540C SRB7P47822 140 aa2.43□□□□□ -2.02
IRC4YDR540C OCA1P50946 238 aaPredicted RBP2.43□□□□□ -2.02
IRC4YDR540C COS10P52924 374 aa2.43□□□□□ -2.02
IRC4YDR540C YGL108CP53139 140 aa2.43□□□□□ -2.02
IRC4YDR540C GIS2P53849 153 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
IRC4YDR540C VPS74Q06385 345 aa2.43□□□□□ -2.02
IRC4YDR540C PPT2Q12036 173 aa2.43□□□□□ -2.02
IRC4YDR540C AYT1Q12226 474 aa2.43□□□□□ -2.02
IRC4YDR540C RKM5Q12367 367 aa2.43□□□□□ -2.02
IRC4YDR540C YML133CQ03099 1374 aa2.43□□□□□ -2.02
IRC4YDR540C YLL067CQ07888 1374 aa2.43□□□□□ -2.02
IRC4YDR540C YLL066CQ99208 1374 aa2.43□□□□□ -2.02
IRC4YDR540C HEM2P05373 342 aa2.42□□□□□ -2.02
IRC4YDR540C RPL20AP0CX23 172 aaKnown RBP2.42□□□□□ -2.02
IRC4YDR540C RPL20BP0CX24 172 aaPredicted RBP2.42□□□□□ -2.02
IRC4YDR540C NOP1P15646 327 aaKnown RBP2.42□□□□□ -2.02
IRC4YDR540C PRP16P15938 1071 aaPredicted RBP2.42□□□□□ -2.02
IRC4YDR540C EXO70P19658 623 aa2.42□□□□□ -2.02
IRC4YDR540C RNA14P25298 677 aaKnown RBP2.42□□□□□ -2.02
IRC4YDR540C PUT3P25502 979 aaPredicted RBP2.42□□□□□ -2.02
IRC4YDR540C PRO3P32263 286 aaKnown RBP2.42□□□□□ -2.02
IRC4YDR540C PMU1P36069 295 aa2.42□□□□□ -2.02
IRC4YDR540C ALG8P40351 577 aa2.42□□□□□ -2.02
IRC4YDR540C SYG1P40528 902 aa2.42□□□□□ -2.02
IRC4YDR540C YJL213WP40896 331 aa2.42□□□□□ -2.02
IRC4YDR540C GWT1P47026 490 aa2.42□□□□□ -2.02
IRC4YDR540C URB2P47108 1174 aa2.42□□□□□ -2.02
IRC4YDR540C KTR5P53966 522 aaPredicted RBP2.42□□□□□ -2.02
IRC4YDR540C RPA49Q01080 415 aaPredicted RBP2.42□□□□□ -2.02
IRC4YDR540C IRC15Q02733 499 aa2.42□□□□□ -2.02
IRC4YDR540C SCM3Q12334 223 aa2.42□□□□□ -2.02
IRC4YDR540C SET6Q12529 373 aa2.42□□□□□ -2.02
IRC4YDR540C CYB2P00175 591 aa2.41□□□□□ -2.02
IRC4YDR540C RHO2P06781 192 aa2.41□□□□□ -2.02
IRC4YDR540C ATR1P13090 542 aa2.41□□□□□ -2.02
IRC4YDR540C MCK1P21965 375 aaKnown RBP2.41□□□□□ -2.02
IRC4YDR540C SPB1P25582 841 aaPredicted RBP2.41□□□□□ -2.02
IRC4YDR540C BUB3P26449 341 aa2.41□□□□□ -2.02
IRC4YDR540C RAD14P28519 371 aa2.41□□□□□ -2.02
IRC4YDR540C HXT3P32466 567 aaKnown RBP2.41□□□□□ -2.02
IRC4YDR540C NFU1P32860 256 aa2.41□□□□□ -2.02
IRC4YDR540C KRE9P39005 276 aa2.41□□□□□ -2.02
IRC4YDR540C SHO1P40073 367 aa2.41□□□□□ -2.02
IRC4YDR540C YFR016CP43597 1233 aaKnown RBP2.41□□□□□ -2.02
IRC4YDR540C ARK1P53974 638 aa2.41□□□□□ -2.02
IRC4YDR540C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
IRC4YDR540C YOL159C-AQ3E769 90 aa2.41□□□□□ -2.02
IRC4YDR540C GDH1P07262 454 aaKnown RBP2.4□□□□□ -2.03
IRC4YDR540C SPS4P09937 338 aa2.4□□□□□ -2.03
IRC4YDR540C ATP10P18496 279 aa2.4□□□□□ -2.03
IRC4YDR540C AGA1P32323 725 aa2.4□□□□□ -2.03
IRC4YDR540C JNM1P36224 373 aa2.4□□□□□ -2.03
IRC4YDR540C OTU2P38747 307 aaKnown RBP2.4□□□□□ -2.03
IRC4YDR540C POP1P41812 875 aa2.4□□□□□ -2.03
IRC4YDR540C GCD10P41814 478 aa2.4□□□□□ -2.03
IRC4YDR540C TFG2P41896 400 aaPredicted RBP2.4□□□□□ -2.03
IRC4YDR540C ELP2P42935 788 aa2.4□□□□□ -2.03
IRC4YDR540C YGR149WP48236 432 aa2.4□□□□□ -2.03
IRC4YDR540C IMP4P53941 290 aaKnown RBP2.4□□□□□ -2.03
IRC4YDR540C SYF1Q04048 859 aaPredicted RBP2.4□□□□□ -2.03
IRC4YDR540C SOV1Q04748 898 aa2.4□□□□□ -2.03
IRC4YDR540C YLR287CQ05881 355 aa2.4□□□□□ -2.03
IRC4YDR540C SFI1Q12369 946 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms