RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS23, Length 660 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS23	YDR246W	AAD4	Q07747	329 aa		4.99	□□□□□ -1.61
TRS23	YDR246W	ENT4	Q07872	247 aa		4.99	□□□□□ -1.61
TRS23	YDR246W	SPE3	Q12074	293 aa	Known RBP	4.99	□□□□□ -1.61
TRS23	YDR246W	HOS1	Q12214	470 aa		4.99	□□□□□ -1.61
TRS23	YDR246W	RUP1	Q12242	671 aa		4.99	□□□□□ -1.61
TRS23	YDR246W	STE2	D6VTK4	431 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	GAL80	P04387	435 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	RHO2	P06781	192 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	AMD2	P22580	549 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	NDI1	P32340	513 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	RIM1	P32445	135 aa	Known RBP	4.98	□□□□□ -1.61
TRS23	YDR246W	TFC3	P34111	1160 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	APL3	P38065	1025 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	SHE3	P38272	425 aa	Known RBP	4.98	□□□□□ -1.61
TRS23	YDR246W	MUP3	P38734	546 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	YHL026C	P38740	315 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	TVP23	P38962	199 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	HXT6	P39003	570 aa	Known RBP	4.98	□□□□□ -1.61
TRS23	YDR246W	HXT7	P39004	570 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	PRM9	P39551	298 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	YEL028W	P39989	153 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	SEC27	P41811	889 aa	Known RBP	4.98	□□□□□ -1.61
TRS23	YDR246W	DIM1	P41819	318 aa	Known RBP	4.98	□□□□□ -1.61
TRS23	YDR246W	RPS10B	P46784	105 aa	Known RBP	4.98	□□□□□ -1.61
TRS23	YDR246W	GUF1	P46943	645 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	AZR1	P50080	613 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	GPG1	P53130	126 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	YGR016W	P53209	190 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	YNL058C	P53947	316 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	YMR155W	Q03795	547 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	YKU80	Q04437	629 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	HRD3	Q05787	833 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	ARO10	Q06408	635 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	ASA1	Q06822	443 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	STP4	Q07351	490 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	RPS10A	Q08745	105 aa	Predicted RBP	4.98	□□□□□ -1.61
TRS23	YDR246W	ICL2	Q12031	575 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	NBP2	Q12163	236 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	RIP-Chip
TRS23	YDR246W	RRP36	Q12481	300 aa	Predicted RBP	4.98	□□□□□ -1.61
TRS23	YDR246W	NKP1	Q12493	238 aa		4.98	□□□□□ -1.61
TRS23	YDR246W	CAR1	P00812	333 aa	Known RBP	4.97	□□□□□ -1.61
TRS23	YDR246W	ATP2	P00830	511 aa	Known RBP	4.97	□□□□□ -1.61
TRS23	YDR246W	APE1	P14904	514 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	HSC82	P15108	705 aa	Known RBP	4.97	□□□□□ -1.61
TRS23	YDR246W	ATP12	P22135	325 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	YIH1	P25637	258 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	HEM12	P32347	362 aa	Predicted RBP	4.97	□□□□□ -1.61
TRS23	YDR246W	DPH5	P32469	300 aa	Predicted RBP	4.97	□□□□□ -1.61
TRS23	YDR246W	MSS1	P32559	526 aa	Predicted RBP	4.97	□□□□□ -1.61
TRS23	YDR246W	TKL2	P33315	681 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	ASK1	P35734	292 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	SRP68	P38687	599 aa	Known RBP	4.97	□□□□□ -1.61
TRS23	YDR246W	BZZ1	P38822	633 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	HPM1	P40481	377 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	GPP1	P41277	250 aa	Known RBP	4.97	□□□□□ -1.61
TRS23	YDR246W	YJL132W	P47014	750 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	ALT2	P52892	507 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	YTP1	P53584	459 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	PRO2	P54885	456 aa	Known RBP	4.97	□□□□□ -1.61
TRS23	YDR246W	CSN9	Q03981	162 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	SPG3	Q04398	127 aa	Predicted RBP	4.97	□□□□□ -1.61
TRS23	YDR246W	AIM32	Q04689	311 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	GLO2	Q05584	274 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	YDL073W	Q07454	984 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	PEX15	Q08215	383 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	APC5	Q08683	685 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	GPM2	Q12008	311 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	RKI1	Q12189	258 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	HRT3	Q12347	344 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	NDJ1	Q12366	352 aa		4.97	□□□□□ -1.61
TRS23	YDR246W	GLN4	P13188	809 aa	Known RBP	4.96	□□□□□ -1.62
TRS23	YDR246W	MRS6	P32864	603 aa	Known RBP	4.96	□□□□□ -1.62
TRS23	YDR246W	PTC1	P35182	281 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	FLO10	P36170	1169 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	PDX3	P38075	228 aa	Known RBP	4.96	□□□□□ -1.62
TRS23	YDR246W	YBR056W	P38081	501 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	TDA11	P38854	504 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	YHR182W	P38870	785 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	AFG3	P39925	761 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	EDC3	P39998	551 aa	Known RBP	4.96	□□□□□ -1.62
TRS23	YDR246W	TAF4	P50105	388 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	AIF1	P52923	378 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	IMO32	P53219	342 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	TIM13	P53299	105 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	DOS2	P54858	310 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	SWC7	Q06707	132 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	ARP7	Q12406	477 aa		4.96	□□□□□ -1.62
TRS23	YDR246W	COX5A	P00424	153 aa		4.95	□□□□□ -1.62
TRS23	YDR246W	RPS21A	P0C0V8	87 aa	Known RBP	4.95	□□□□□ -1.62
TRS23	YDR246W	URA4	P20051	364 aa		4.95	□□□□□ -1.62
TRS23	YDR246W	ZIP1	P31111	875 aa		4.95	□□□□□ -1.62
TRS23	YDR246W	TFC1	P32367	649 aa		4.95	□□□□□ -1.62
TRS23	YDR246W	AEP1	P32493	518 aa		4.95	□□□□□ -1.62
TRS23	YDR246W	BUD2	P33314	1104 aa		4.95	□□□□□ -1.62
TRS23	YDR246W	ELF1	P36053	145 aa		4.95	□□□□□ -1.62
TRS23	YDR246W	SIF2	P38262	535 aa		4.95	□□□□□ -1.62
TRS23	YDR246W	FHL1	P39521	936 aa		4.95	□□□□□ -1.62
TRS23	YDR246W	SEO1	P39709	593 aa		4.95	□□□□□ -1.62
TRS23	YDR246W	ALD5	P40047	520 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms