RNA–Protein interactions for RNA: YDR233C

RTN1, Transcript of Reticulon protein, yeast

Gene RTN1, Length 888 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN1	YDR233C	YRF1-4	O13559	1382 aa		4.93	□□□□□ -1.62
RTN1	YDR233C	SEC62	P21825	274 aa		4.93	□□□□□ -1.62
RTN1	YDR233C	PPH22	P23595	377 aa		4.93	□□□□□ -1.62
RTN1	YDR233C	SNT1	P25357	1226 aa		4.93	□□□□□ -1.62
RTN1	YDR233C	SYG1	P40528	902 aa		4.93	□□□□□ -1.62
RTN1	YDR233C	DLD2	P46681	530 aa	Known RBP	4.93	□□□□□ -1.62
RTN1	YDR233C	GIR2	Q03768	265 aa	Predicted RBP	4.93	□□□□□ -1.62
RTN1	YDR233C	KEL3	Q08979	651 aa	Predicted RBP	4.93	□□□□□ -1.62
RTN1	YDR233C	RKM5	Q12367	367 aa		4.93	□□□□□ -1.62
RTN1	YDR233C	MRS3	P10566	314 aa		4.92	□□□□□ -1.62
RTN1	YDR233C	RIM2	P38127	377 aa		4.92	□□□□□ -1.62
RTN1	YDR233C	BZZ1	P38822	633 aa		4.92	□□□□□ -1.62
RTN1	YDR233C	YTA12	P40341	825 aa		4.92	□□□□□ -1.62
RTN1	YDR233C	YGR149W	P48236	432 aa		4.92	□□□□□ -1.62
RTN1	YDR233C	CUL3	P53202	744 aa		4.92	□□□□□ -1.62
RTN1	YDR233C	YEH2	Q07950	538 aa		4.92	□□□□□ -1.62
RTN1	YDR233C	PDX1	P16451	410 aa		4.91	□□□□□ -1.62
RTN1	YDR233C	YIM1	P28625	365 aa		4.91	□□□□□ -1.62
RTN1	YDR233C	TRS65	P32893	560 aa		4.91	□□□□□ -1.62
RTN1	YDR233C	SIP2	P34164	415 aa	Known RBP	4.91	□□□□□ -1.62
RTN1	YDR233C	TUL1	P36096	758 aa		4.91	□□□□□ -1.62
RTN1	YDR233C	SNM1	P40993	198 aa		4.91	□□□□□ -1.62
RTN1	YDR233C	OCA1	P50946	238 aa	Predicted RBP	4.91	□□□□□ -1.62
RTN1	YDR233C	RLI1	Q03195	608 aa	Known RBP	4.91	□□□□□ -1.62
RTN1	YDR233C	VTA1	Q06263	330 aa		4.91	□□□□□ -1.62
RTN1	YDR233C	SYO1	Q07395	620 aa		4.91	□□□□□ -1.62
RTN1	YDR233C	ADK2	P26364	225 aa		4.9	□□□□□ -1.63
RTN1	YDR233C	RAD14	P28519	371 aa		4.9	□□□□□ -1.63
RTN1	YDR233C	AFG1	P32317	509 aa		4.9	□□□□□ -1.63
RTN1	YDR233C	RML2	P32611	393 aa		4.9	□□□□□ -1.63
RTN1	YDR233C	GPI1	P53306	609 aa		4.9	□□□□□ -1.63
RTN1	YDR233C	BNI5	P53890	448 aa	Known RBP	4.9	□□□□□ -1.63
RTN1	YDR233C	RPM2	Q02773	1202 aa		4.9	□□□□□ -1.63
RTN1	YDR233C	SIL1	Q08199	421 aa		4.9	□□□□□ -1.63
RTN1	YDR233C	NRT1	Q08485	598 aa		4.9	□□□□□ -1.63
RTN1	YDR233C	GLK1	P17709	500 aa	Known RBP	4.89	□□□□□ -1.63
RTN1	YDR233C	ATP10	P18496	279 aa		4.89	□□□□□ -1.63
RTN1	YDR233C	STB6	P36085	766 aa		4.89	□□□□□ -1.63
RTN1	YDR233C	THI2	P38141	450 aa		4.89	□□□□□ -1.63
RTN1	YDR233C	RRP3	P38712	501 aa	Known RBP	4.89	□□□□□ -1.63
RTN1	YDR233C	YJL068C	P40363	299 aa		4.89	□□□□□ -1.63
RTN1	YDR233C	DIM1	P41819	318 aa	Known RBP	4.89	□□□□□ -1.63
RTN1	YDR233C	SAD1	P43589	448 aa		4.89	□□□□□ -1.63
RTN1	YDR233C	YGL082W	P53155	381 aa		4.89	□□□□□ -1.63
RTN1	YDR233C	MNP1	P53163	194 aa	Predicted RBP	4.89	□□□□□ -1.63
RTN1	YDR233C	YLR345W	Q06137	509 aa		4.89	□□□□□ -1.63
RTN1	YDR233C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
RTN1	YDR233C	YDL009C	Q12210	107 aa		4.89	□□□□□ -1.63
RTN1	YDR233C	BRR1	Q99177	341 aa	Predicted RBP	4.89	□□□□□ -1.63
RTN1	YDR233C	RHO2	P06781	192 aa		4.88	□□□□□ -1.63
RTN1	YDR233C	IDH2	P28241	369 aa	Known RBP	4.88	□□□□□ -1.63
RTN1	YDR233C	IKS1	P47042	667 aa		4.88	□□□□□ -1.63
RTN1	YDR233C	HCR1	Q05775	265 aa	Known RBP	4.88	□□□□□ -1.63
RTN1	YDR233C	DAP1	Q12091	152 aa		4.88	□□□□□ -1.63
RTN1	YDR233C	LSP1	Q12230	341 aa	Known RBP	4.88	□□□□□ -1.63
RTN1	YDR233C	SPS4	P09937	338 aa		4.87	□□□□□ -1.63
RTN1	YDR233C	YCR022C	P25620	114 aa		4.87	□□□□□ -1.63
RTN1	YDR233C	YCR051W	P25631	222 aa		4.87	□□□□□ -1.63
RTN1	YDR233C	GCS1	P35197	352 aa		4.87	□□□□□ -1.63
RTN1	YDR233C	FAU1	P40099	211 aa		4.87	□□□□□ -1.63
RTN1	YDR233C	ROY1	Q04847	553 aa		4.87	□□□□□ -1.63
RTN1	YDR233C	MRPL51	Q06090	140 aa	Predicted RBP	4.87	□□□□□ -1.63
RTN1	YDR233C	GRS2	Q06817	618 aa		4.87	□□□□□ -1.63
RTN1	YDR233C	BUB3	P26449	341 aa		4.86	□□□□□ -1.63
RTN1	YDR233C	FUN19	P28003	413 aa	Predicted RBP	4.86	□□□□□ -1.63
RTN1	YDR233C	URA7	P28274	579 aa	Known RBP	4.86	□□□□□ -1.63
RTN1	YDR233C	ATS1	P31386	333 aa		4.86	□□□□□ -1.63
RTN1	YDR233C	YJL070C	P40361	888 aa		4.86	□□□□□ -1.63
RTN1	YDR233C	POP1	P41812	875 aa		4.86	□□□□□ -1.63
RTN1	YDR233C	TFG2	P41896	400 aa	Predicted RBP	4.86	□□□□□ -1.63
RTN1	YDR233C	SSU1	P41930	458 aa		4.86	□□□□□ -1.63
RTN1	YDR233C	ERB1	Q04660	807 aa	Known RBP	4.86	□□□□□ -1.63
RTN1	YDR233C	NDD1	Q08887	554 aa		4.86	□□□□□ -1.63
RTN1	YDR233C	ERP4	Q12450	207 aa		4.86	□□□□□ -1.63
RTN1	YDR233C	NDC1	P32500	655 aa		4.85	□□□□□ -1.63
RTN1	YDR233C	NIP100	P33420	868 aa		4.85	□□□□□ -1.63
RTN1	YDR233C	HCS1	P34243	683 aa		4.85	□□□□□ -1.63
RTN1	YDR233C	YNK1	P36010	153 aa	Known RBP	4.85	□□□□□ -1.63
RTN1	YDR233C	SOV1	Q04748	898 aa		4.85	□□□□□ -1.63
RTN1	YDR233C	YLR278C	Q05854	1341 aa		4.84	□□□□□ -1.63
RTN1	YDR233C	CAR1	P00812	333 aa	Known RBP	4.84	□□□□□ -1.63
RTN1	YDR233C	RPL15A	P05748	204 aa	Known RBP	4.84	□□□□□ -1.63
RTN1	YDR233C	RIP1	P08067	215 aa		4.84	□□□□□ -1.63
RTN1	YDR233C	CLC1	P17891	233 aa		4.84	□□□□□ -1.63
RTN1	YDR233C	YME2	P32843	850 aa		4.84	□□□□□ -1.63
RTN1	YDR233C	LOS1	P33418	1100 aa	Predicted RBP	4.84	□□□□□ -1.63
RTN1	YDR233C	CCT2	P39076	527 aa	Known RBP	4.84	□□□□□ -1.63
RTN1	YDR233C	URB2	P47108	1174 aa		4.84	□□□□□ -1.63
RTN1	YDR233C	ARK1	P53974	638 aa		4.84	□□□□□ -1.63
RTN1	YDR233C	IRC15	Q02733	499 aa		4.84	□□□□□ -1.63
RTN1	YDR233C	RMT2	Q03305	412 aa		4.84	□□□□□ -1.63
RTN1	YDR233C	AFI1	Q99222	893 aa		4.84	□□□□□ -1.63
RTN1	YDR233C	GPH1	P06738	902 aa	Known RBP	4.83	□□□□□ -1.64
RTN1	YDR233C	SEC63	P14906	663 aa		4.83	□□□□□ -1.64
RTN1	YDR233C	REC107	P21651	314 aa		4.83	□□□□□ -1.64
RTN1	YDR233C	GEX1	P25596	615 aa		4.83	□□□□□ -1.64
RTN1	YDR233C	VMA8	P32610	256 aa	Known RBP	4.83	□□□□□ -1.64
RTN1	YDR233C	PTR2	P32901	601 aa		4.83	□□□□□ -1.64
RTN1	YDR233C	HAT2	P39984	401 aa		4.83	□□□□□ -1.64
RTN1	YDR233C	RPR2	P40571	144 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms