RNA–Protein interactions for RNA: YDR195W

REF2, Transcript of RNA-binding protein, yeast

Gene REF2, Length 1,602 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
REF2	YDR195W	MUM2	P38236	366 aa		3.18	□□□□□ -1.9
REF2	YDR195W	YGR210C	P42942	411 aa		3.18	□□□□□ -1.9
REF2	YDR195W	IMD4	P50094	524 aa	Known RBP	3.18	□□□□□ -1.9
REF2	YDR195W	ZPR1	P53303	486 aa	Known RBP	3.18	□□□□□ -1.9
REF2	YDR195W	HHF1	P02309	103 aa	Known RBP	3.17	□□□□□ -1.9
REF2	YDR195W	HEM15	P16622	393 aa		3.17	□□□□□ -1.9
REF2	YDR195W	NAM9	P27929	486 aa		3.17	□□□□□ -1.9
REF2	YDR195W	YIM1	P28625	365 aa		3.17	□□□□□ -1.9
REF2	YDR195W	MCM10	P32354	571 aa		3.17	□□□□□ -1.9
REF2	YDR195W	TCD2	P36101	447 aa	Known RBP	3.17	□□□□□ -1.9
REF2	YDR195W	FAU1	P40099	211 aa		3.17	□□□□□ -1.9
REF2	YDR195W	PAL1	Q05518	499 aa	Known RBP	3.17	□□□□□ -1.9
REF2	YDR195W	YJR112W-A	Q3E743	109 aa		3.17	□□□□□ -1.9
REF2	YDR195W	SEM1	O94742	89 aa		3.16	□□□□□ -1.9
REF2	YDR195W	SEC53	P07283	254 aa	Known RBP	3.16	□□□□□ -1.9
REF2	YDR195W	PRD1	P25375	712 aa		3.16	□□□□□ -1.9
REF2	YDR195W	ARO2	P28777	376 aa	Known RBP	3.16	□□□□□ -1.9
REF2	YDR195W	MUD2	P36084	527 aa	Known RBP	3.16	□□□□□ -1.9
REF2	YDR195W	NDT80	P38830	627 aa		3.16	□□□□□ -1.9
REF2	YDR195W	SDT1	P53078	280 aa		3.16	□□□□□ -1.9
REF2	YDR195W	ARK1	P53974	638 aa		3.16	□□□□□ -1.9
REF2	YDR195W	ELP3	Q02908	557 aa	Known RBP	3.16	□□□□□ -1.9
REF2	YDR195W	PIR3	Q03180	325 aa		3.16	□□□□□ -1.9
REF2	YDR195W	PBA1	Q05778	276 aa		3.16	□□□□□ -1.9
REF2	YDR195W	BUB3	P26449	341 aa		3.15	□□□□□ -1.9
REF2	YDR195W	CRM1	P30822	1084 aa	Known RBP	3.15	□□□□□ -1.9
REF2	YDR195W	PAH1	P32567	862 aa		3.15	□□□□□ -1.9
REF2	YDR195W	GCD10	P41814	478 aa		3.15	□□□□□ -1.9
REF2	YDR195W	URB2	P47108	1174 aa		3.15	□□□□□ -1.9
REF2	YDR195W	YGR066C	P53242	292 aa		3.15	□□□□□ -1.9
REF2	YDR195W	OGG1	P53397	376 aa	Predicted RBP	3.15	□□□□□ -1.9
REF2	YDR195W	ESA1	Q08649	445 aa		3.15	□□□□□ -1.9
REF2	YDR195W	RLM1	Q12224	676 aa		3.15	□□□□□ -1.9
REF2	YDR195W	RKM5	Q12367	367 aa		3.15	□□□□□ -1.9
REF2	YDR195W	COR1	P07256	457 aa		3.15	□□□□□ -1.91
REF2	YDR195W	NDI1	P32340	513 aa		3.15	□□□□□ -1.91
REF2	YDR195W	HXT1	P32465	570 aa		3.15	□□□□□ -1.91
REF2	YDR195W	RSM22	P36056	628 aa		3.15	□□□□□ -1.91
REF2	YDR195W	NOP4	P37838	685 aa	Known RBP	3.15	□□□□□ -1.91
REF2	YDR195W	ERP2	P39704	215 aa		3.15	□□□□□ -1.91
REF2	YDR195W	YIL067C	P40514	678 aa		3.15	□□□□□ -1.91
REF2	YDR195W	YFL067W	P43537	175 aa		3.15	□□□□□ -1.91
REF2	YDR195W	RRT5	P43607	289 aa		3.15	□□□□□ -1.91
REF2	YDR195W	IOC4	Q04213	475 aa		3.15	□□□□□ -1.91
REF2	YDR195W	RPC11	Q04307	110 aa	Predicted RBP	3.15	□□□□□ -1.91
REF2	YDR195W	AVL9	Q12500	764 aa		3.15	□□□□□ -1.91
REF2	YDR195W	MES1	P00958	751 aa	Known RBP	3.14	□□□□□ -1.91
REF2	YDR195W	CHS1	P08004	1131 aa		3.14	□□□□□ -1.91
REF2	YDR195W	ISY1	P21374	235 aa	Predicted RBP	3.14	□□□□□ -1.91
REF2	YDR195W	FRE2	P36033	711 aa		3.14	□□□□□ -1.91
REF2	YDR195W	MBB1	P39534	108 aa		3.14	□□□□□ -1.91
REF2	YDR195W	REE1	P40893	198 aa		3.14	□□□□□ -1.91
REF2	YDR195W	AVT4	P50944	713 aa		3.14	□□□□□ -1.91
REF2	YDR195W	YGL039W	P53183	348 aa	Known RBP	3.14	□□□□□ -1.91
REF2	YDR195W	RCN2	Q12044	265 aa		3.14	□□□□□ -1.91
REF2	YDR195W	TMS1	Q12116	473 aa		3.14	□□□□□ -1.91
REF2	YDR195W	ATP11	P32453	318 aa		3.13	□□□□□ -1.91
REF2	YDR195W	GLC7	P32598	312 aa	Known RBP	3.13	□□□□□ -1.91
REF2	YDR195W	SPR1	P32603	445 aa		3.13	□□□□□ -1.91
REF2	YDR195W	NOP16	P40007	231 aa	Known RBP	3.13	□□□□□ -1.91
REF2	YDR195W	ART5	P53244	586 aa	Known RBP	3.13	□□□□□ -1.91
REF2	YDR195W	IBD2	P53892	351 aa		3.13	□□□□□ -1.91
REF2	YDR195W	SLG1	P54867	378 aa		3.13	□□□□□ -1.91
REF2	YDR195W	VPS38	Q05919	439 aa		3.13	□□□□□ -1.91
REF2	YDR195W	RAV1	P47104	1357 aa		3.13	□□□□□ -1.91
REF2	YDR195W	WBP1	P33767	430 aa	Known RBP	3.12	□□□□□ -1.91
REF2	YDR195W	PTH1	P38876	190 aa	Known RBP	3.12	□□□□□ -1.91
REF2	YDR195W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
REF2	YDR195W	MHR1	Q06630	226 aa		3.12	□□□□□ -1.91
REF2	YDR195W	RRG7	Q08774	242 aa	Predicted RBP	3.12	□□□□□ -1.91
REF2	YDR195W	CTI6	Q08923	506 aa		3.12	□□□□□ -1.91
REF2	YDR195W	THP3	Q12049	470 aa	Known RBP	3.12	□□□□□ -1.91
REF2	YDR195W	SDH3	P33421	198 aa		3.11	□□□□□ -1.91
REF2	YDR195W	NAT2	P37293	288 aa		3.11	□□□□□ -1.91
REF2	YDR195W	MTC6	P38849	526 aa		3.11	□□□□□ -1.91
REF2	YDR195W	MFB1	Q04922	465 aa		3.11	□□□□□ -1.91
REF2	YDR195W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
REF2	YDR195W	CPR4	P25334	318 aa		3.11	□□□□□ -1.91
REF2	YDR195W	MRE11	P32829	692 aa		3.11	□□□□□ -1.91
REF2	YDR195W	MRX6	P48564	524 aa		3.11	□□□□□ -1.91
REF2	YDR195W	ODC1	Q03028	310 aa		3.11	□□□□□ -1.91
REF2	YDR195W	TMC1	Q08422	150 aa	Predicted RBP	3.11	□□□□□ -1.91
REF2	YDR195W	HRT3	Q12347	344 aa		3.11	□□□□□ -1.91
REF2	YDR195W	GAL80	P04387	435 aa		3.1	□□□□□ -1.91
REF2	YDR195W	SRO77	P38163	1010 aa		3.1	□□□□□ -1.91
REF2	YDR195W	REG2	P38232	338 aa		3.1	□□□□□ -1.91
REF2	YDR195W	SYG1	P40528	902 aa		3.1	□□□□□ -1.91
REF2	YDR195W	POP6	P53218	158 aa		3.1	□□□□□ -1.91
REF2	YDR195W	YLR108C	Q12259	485 aa		3.1	□□□□□ -1.91
REF2	YDR195W	LEU4	P06208	619 aa	Known RBP	3.09	□□□□□ -1.91
REF2	YDR195W	RPL31B	P0C2H9	113 aa	Known RBP	3.09	□□□□□ -1.91
REF2	YDR195W	CBS1	P14066	229 aa		3.09	□□□□□ -1.91
REF2	YDR195W	OLE1	P21147	510 aa	Known RBP	3.09	□□□□□ -1.91
REF2	YDR195W	SWD3	P38123	315 aa		3.09	□□□□□ -1.91
REF2	YDR195W	MIX23	P38162	196 aa		3.09	□□□□□ -1.91
REF2	YDR195W	POP1	P41812	875 aa		3.09	□□□□□ -1.91
REF2	YDR195W	UPF3	P48412	387 aa	Known RBP	3.09	□□□□□ -1.91
REF2	YDR195W	YLR152C	P54072	576 aa		3.09	□□□□□ -1.91
REF2	YDR195W	SOV1	Q04748	898 aa		3.09	□□□□□ -1.91
REF2	YDR195W	MRPL35	Q06678	367 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms